CmUC11G204120 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G204120
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	survival of motor neuron-related-splicing factor 30
Location	CmU531Chr11: 445226 .. 453900 (+)
RNA-Seq Expression	CmUC11G204120
Synteny	CmUC11G204120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAAGGGCTGCGTTCTTAATCGCGGGGAAGGTGGCGTTGTGTGTGTTTTTCTCTTCATCATCCTCTGATTCTCGTTCTGATTTTTCCAATTTTACGCTCTTTTTCTTCCTTCTCCCATCTGTTCATCCTTGCAAAATTTTCTCCCACACAATTCTGTAGTTTCAACTTCTGAATTCATCTTCTACCAAAATGCAAGGAGGAGAAGATGTAAGCATTGAAGAGTTGGCTAATAATCTCTCTACCTACAAGGACCAGCTTCAGCAGGTACTCCTCTTCTCCATTTCTTTCTGGTTAATAATCCCTTCATTTTTTTATAATGATTTTGTTTCAGTTACTGGGGTTCTCTTTCTTCACATTTATTCAAAGCAAAATTGGATATTTATGATCTTGTAAACCTTTGCCGCTGTCATTCCTGAGTTCTTCCTAGTGGTTTGTATCTGAATTAGGGGTTTGCCCATCACCTTCGACTGCTCCGGTGCTAAGTTGCAGCGAATCCGGAGGAAATGAAACCTGTATTGGATAATTGCATCAAACCTAGAAATTTAGAACTCAATCCACATAAATCAGTATCAAGATTCTTTTTAGGACTTTCCAGTTTCATGAGGGTTTATCTGTCCTGGTTCTTTATTATAACATTTTTTTTTTTTTTTTACTTAGGATACTGAAAATCTTGACCAGGGTTTAAGCATCTGAATGATTTTTACATTTGTATGGTGAATTCTTAATTATCAGTCAGTCACTTCCTGCACCCAACTACATTAATTCTTGGCTTCCTCACTTTGTTTCATTTTGTATGTATGTTTGGGAAAATAACTTCTTTCTATCCTGATCCAGGTCAGACAGCTGTTAGATGATGACCCTAGCAACTCTGAATACATAGATATGGAAAAGGAGCTTGAAGAGGTAGTTTGTTTTTTTCCTCTTATTATGCCCATCCTTCCTTGTGAACTCGTCGCATGTGTATGCTTTAGCACTCTTCATATTCCCGCTGAATGTACTTTTAGGTTCAGTTTCTGCTGTGGCACTAAAGATCAGACAACGCTCAGAACTATTATTTTTATTATGTGTGTTTTCAGTCAAGTTTGCTTTCTTTCTTTTGTTTGTCTTCCTTTTTCCTTTTAAAGGAAACGTGTTGTTGAAATAAGAAAGAGTTATGGCCCCTGTGGAGGTTGTCATTTTCATTTTTGGGAGGAAAAGGTGAGGGGGTTGTATCTTTCATTTATGTGCTCCAGAGCTCTAATCTCTGGTCATAAATGATCATTATTGGATATGTGTGAAAATTTGAAACTTCATTAAGATGCACATCACTTCTACCTTGGTTCCCTTGCAGGTGTGCTAATTTTCGTGATGGCCAGTCTGCTCTTCCCCTGACCTCCTTTCAGATGCTGATCCTGAGATTTAAGTTCTTGTGTTTTTTTTTTCTTTTTTTCTTTTTGGGGACAATTACCTGCTCTTTATGAAATTTTACAGTTGAAGATATATTTTAACAGAAACATTGGACTTGGGCTAAAGTTGCAGTAATGCAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTGGAAACAGGTGATGACAGTGCATTAATTAGTTTCCAGCAGCCTAAAGAAAATGAGATGGTAAGTTCACATTTGTCCTCATTTTGCACATTGCATTTCTCTGCTGGAAGCAACATAATGTCATAGATGGTTATAGCTTTAGATTTAATGCACACTGTTTGGATCTCTGTGTGGTTCGTTGTGTATGTTGGTATTGTTTTTGTGTATGTGCTCACATGTGCAACTGCAAACACATTTGTGTCTGTGTTTTGAAGGCTTAATATCTTTGCCTTATTTGGAAGCATCCCTCGTAAATGGTTACTGGCATGTGGTTTTAATAATCTGAAACACATTGTCCTTGAACACAACACTCAAAACCCACTGAAGATTGAACTTGGAGAATGACTTCCATCAACCAGCCTTTGAATATTGACAATCAAAGAGAAGGAAGCTTTCTTTGGAGTGTTAGAGAGCAGTTGAGAGTTCCAAAAAATCATAACCCAAATAATGATGTTTACTTGACAAGGATATTTTGATTTCCATAGAGCTTTGTAAAGAAGTTTATCCATTGGTGTAGATGCCGACAAGTGCTTGTAAATGGATTTAACTGAAAACAAACGTAAAGACTCCAACTTCTTGAATTCGGGCGATCAAGAACTCTTCGGCCTTCAAAAGAACCCAGTGAAAATCCAAAGCTTCACTGATTCTTGCTGGGATGGCTTGCATTTTGCTTCTCCAAGTAACCTAGTTGCCCCATTCATATTTTTTAAAGATACAAATTTCATTAATGTATGAAATTTACAAAAGAGGGTGAAGCCCTAACCAAAAGAGTTACAAAAGATTTCTCCAATTGGTTAAAAGGGAAGTGCATTTACACCCAGACATAACAAGGAGAATAATATGATCGAATAATTGAAGGTGACTTCCATATCTTGAAAAAGGAGGTTGCTGTGCTCCTTCCAAAGTTGTCCACAAAAGAATCGAATGAGATGCATCTGACGGATTCTTTTTCCCTTGATAAAAGGGTGGCCAAAGAGTAATTGAGCAAAATGTTGATATCACTACGAATAGTGAGGTTCCATTTGAAAGCTACAATCAATTACCTCTCCCTCTTCAAAATTCCCAGCAAAGTGGCCCATATGATAGACCAACTACTTGTCACACCCCCTCCCAGATTATCCTCTTTAACCTGGAAAAGGGTATGAAGACAGCAAATATCACCCATTTTGTGAGGTTCACTGCCACTTGTACCTATTTAACCTGTTGGAAACATCCTCATATATAGCCACCCACAAAGTCCTTTCCTCAAAGGTTATAAGTCTTAAACTGAGGAATGAGGGTCTCCTTGCAAAATGGATTTGGAGGTTCAGGGTGGAAAAGTCTGCTTTGTGGAGAAGGGACATTGCTTCCAAATTTGGCACTTATTTTTGTGGTAACAAAGCTGGAACCCGTTCTATGTCCCCTGCCGAAGGCCCACGGAAAGCCCTGGTGGATTAGCATGTGGCTGTTGCTCTTGGAAACGGTCGTTCTATCTCCTTTTGGTATGATTCTTTGGGTAAGCAATCGACCTTCAACTTATTTGCTCAGTCCTTTACCAAGGAAGCCTCAGTCTTTGAGTTATGGAACATGTTAAGGGTGGCTGGAACCTCCGACTTCGTAGGCCCTTAATGATTCAAAAATTGATGAATAGGCTCACCTCTCTCAATTGCTCACAAATCACCAACCCCATCAATCTGACGACTAGTGGTTTTGGAAGCCCGAATCATCTGGGCCTTTTCTATAAAATCCTGGATTGCTCTCAAGTACCAAAATAGCACTAATTTTTTTGCTGGCCCTTCTGAAGTTATTTGGTCCGACCAATACCCCAAAAAGATTAAATTCATTTCATTCATCAATGAAATTTTATCTTATAAAAAAAATATTTCCTAAATCTGATGACAAACGGGCGACGGATGAAAAAGTGTCTTTGAGATAGGGCCACCTTGTTGAAGGCCTCTTATGGCTAAAATCCTACCTTTAGGGCGGGCATTGATAATTATGGTGAAGTTTGTTGATGAAATGCACCCCTTTAGATATCTTCTCCATGTTGAACCAAATCCCATAGCATTGAGGACTAAATCAAGGAAATCTCAATCCACTTTGTCAAAAGTCTTTTCATTGTCAAGGTTAACCACAATGCCATTTCTTTTCTTTTTGTGCTATTTGTTGGCAATCAAATATGTATCAATAATTTGTCTTCCCTCCACAAATCCACCAATGCCAATTGAAAATTTGTGATGGGGTCTGAGGGAGGGACATTGTTGACCTTCTATGATAGAACTTCAGCAATGATCTTACAGAGATAAGAGATGAGACTAATATGACAAAAATCACCAACAATCCTATCATCCACTCTTTTTGGTATAGGCAAATGTTAGCTTCGTTGAGGCTAACATTGATGATTCCGGTTTTAGAAGAATCTTGGAACACACTCATTATATCATCTTTAAGAATGTTCCAATATTTTTTTATAGAACTCTGTTGTGTAGCCATCTTGACTAGGGGATTTACTAGTCCCGAGATCTTTTATTGTAGACTAAACCTTGGATTCCGTAAAGTTCAGTTCAAGATCATGAGACTGATTCTGAGTTATTGGATCCCAATTCAAGATTAATGGAAGGAAACAATGCCCACTGTGTTTAGTGTATAGTTTCTCGAATCTATTTCAGCGAGCAAACTGCAACCATTTTGAGATACAATTTCTTGAATGGTATTTTCTTTTGTCTGCATTCATCAACCTGATGAAAAAATTGGAGTTCATATCACCCTCGTAAGTTATCTATCCTTGCATTTTTTGCCTCCAATGAACACCATATTGTGGCTGTAAATCCCCCTTTTCTTCTGTGGCATCCAAAATGGCAAGGTCAAACATCAGCCTGATTGTTTAGTGTGTTAAACACTCAAAAGGGGTTCTGTTCCATTCCTTAACAACAGATTTAAGAACTTTCAACATCTGTATAAAAGAATGCGGATGCGCATGGGATTGTCTTTCGACCACTTTAGGATCAATGGTTCGAAAGGATGTTGTTCCATCCACATATTTTCTAAGCGGAAAGGGAGTAGATCTCATTTGTTGAACCCAACTGAAGCAAAATAGGGAAGTGATTAGAGGTGAGCCTACCAACCCATCAAATCGATGCATCTTTGAATTTGTCCAGAACAGTTTCTGTGAAGGCCCAATCATAGTATTAACTCATAGATTGACCCAAAAGCTCAAGCTGATGGACGAAGGAAAATTTAATATTATATGACAACACTACCTGTTACTTGTGGACTTGAAATATGTAGGAGACCCGGGAAGTGGAAATCAATATTAATTGGGGAGGAAATGGCATTGTAGGGGTAAACCTAAGACCTCCTGACCTCCTGCTCTGATGCAATATTAGATAACATGAGGTTCTATCTCAAAACCAATTAGCAATGAGAGGAGTAGCCCATGTATCTAGTAAAGATTCTAAAACCTTTCCAGTTTCCAACGAGGGATTCTCAATACACCCTTTTAAGATGGTGCCTCTTTTGGTTCACCATTCTTGGCTCGACCCAATGCCCCTTTGTTTTTGTTCTCAGCTAATTGGATAGCCATTTGTTATTTGTTTATTTTTATTTTGTCTATCGAGGATTCCTAATTCTCCTTTACCTCTCTGTACCTCTCTTTTTAAATTTTAAGACATACTACAAAAAGCAATTAGAATGGTTTGACATGGAAGCAGTACCACTCAAGAGACTTCATAAATTGCTTGGCAGTTGAATCAACCAGCTTCCTTTGATAATATTTTATTCCATTCATGTACATAATGCTTACATGGAAGCATGTATGTTTTAGTGATCTAATATTCTATGTTCTTGGTATGCAGGAAGCTGGAAGCATGTCTGATTATCATGAGAAATTTCCTGTTGGATCAAAAGTTCAAGCCGTTTGGAGTGAGGACGGGGAGTGGTGAGTGAAAAAATGGAGAAAATTTACAACCTTACTCAAACAGTATCTGTTCTGTAGGTTGTACAACTGTGCTCTTAGGTTCCAAAAAAGGAAATTTATTCTCCAACTTATTATCTTTTTTGTTAGAAAAGAGACATTGTTGAAGATTAATGGTGTTTGAAAGAGATTTGTGCAAGTTTACAAATTATTGGGGCATGTACCTGAGAATATTGAAAGGACTCAAGTGCCAAAATAAATAGTGTCCGTCTCCTATCTGTGAGCATGGAGGGGTTTTTTTCTCTCTCTTTCTTTCGTTCTTTTTTTTGGTTGGGGGGGGGGGGGGGGGATTCTGACTCTATTCACAAGAAACTGCAACATTGCCATAAACTTAGTTTTGCAAAATGGATTTTAATCAAAATCAGGTTATTGTTATACTATGACAGCAGCTAAGCTGCCCCAAAACTTTGTAAATTTATTTCATCAATTGCTTTTAAAGAGAAGCCTTAGCATCTTTGTAGAAAAGAAGGGAATGAAAAAACATGTTAAATTTAGAGTTTGTTTAAATCAATTTAATACCACCGTGACTATAATAGCCGTTCCCTTTGCGAAAATTATGAACCTCTAAACTCATCTTCATCTCTTCCCTCCAGTTTTCAGTTCATTGTGTGAGGAGAGTTGGTCCCTATTCAGGTTTAATTTGACCCTTTGACCTTCAATTGCTAAAGAGTTTTGTAACTTTTCGTTCGGTCTTACTTTTTAGACTAGAGCCCTTTTCTGTATAGCTAGTTTTTTGAGGTTCCCTTTCTCTGGCTATTTTTTGATGCCCCTCTTGTTCTTTCATGTTTCTTAATGTAACCATTTCCTATTGTAAAAAGTTTCTGTTCAGCTATCTTGTTTTGAGCCTTCGATGTAACATCTTCACCTGGTCTCTTATCAAAATGAATGATAAGTCTATGAGAATAGGACTTAGTCCGTTGAAGCTGATTTTAGTTTCTAGGTCTCCAAGCATATACTAATTTTGTTGATGGACGCATTTCTTACTTCTCTTAGCGTCAATGTTTTCTGCCACCTCTTTTGAAGCTTTCGTTCTTTTCCCCTTTTTGTTTAACTACTTTTTCTTGACTGTTTTTTTTAATAGAAACAAAACTTTTCCCTTGATTGTGTACAATTGTATGAATATTCAGGTACGATGCTACAATTGAAGCCCACACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTAAGGTTTCTACACCTGCAGTTTGCATGACTGTTTTCATTATTTTTAAGAGTTATCTTTTATCAGAAAAAAAGAGCACTCTAGTATTTCTTCAAAAAGATCTCGGTGTGTTTCTCTCTAAATCAACTAGAAATATGAGGAATTGGTTCATGGTTAGTAAATATGAGACATCTCACTTTGGATGGGTTCAATCCGTAGGAGTTAGGACTAAAAGCATATGTAAGAATTCTTGGAAGGCCATCTTCATTGGTTTGAGTTCCTTTGTTTGTTGGATTAGCTGGTCTAAGTATAAATACCATGTTTTCCTCTTTGTAAGACTTGATTGAACATTAATAAAATTCTTGCAATTTGGTTTACTCTAGTTTGCCTAAAATACTCGCAGGTATCTTGAACTCATTTTCTCTGAATTCTATGTTATTTATATTGGCCCTAATTATTACTAGGCCAATAACTAATAAGATATTGTTTCTTCTTGAAAAGAAAAAATATGTACATTATTGATTGATACAGGGGAGAGACAACTGCAAGTACAAGAAGGGCTCATGAGGGAGAGTTTAGGAGTTCGATCATGATATACATATTTCTGAAGTTTAGGAGTTTTATATAGATATACACGTACCTGTTAAATGGAGTATTAACCTTTTACCTAATTAGTCAGTTAGTAGTGCACCAATTGTCGACACTTATGATGTCTACTAATTTTAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAGCAGGATATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCGCGAAATTTACCATCAAAGCTTCGAATTGAACCCGATGATCCTGAGGACGTAGTAAGTAGTAGATAATCTCATATTTAATGGCAACTAATTTAATCTAGTAATTAGTTTGGTATTTAAGAAAAAAATTTAGTAGTGCATTTGTTTTGTACCTGCGTGCTTGAAATTTGTGTGTATATATATATTTTATAATTGAGTACAACCCGCCTCCGAAAACTTGCTCTGATGTAGTAAATGTTTTGTATAGAAAGCCACCAAACGCAAGAAAATTCATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACTCAAAACAAACGGCAGAATGCTTGGCAGCAATTTCAATCCGCAAAAGGCAAGTCTAAGAAGGTACGTATTATGAAATCTAGCATTTTGTGGAATATTAAGTGTGTTCATCGAATCCCAACAGTTATAAGGGAAAACCCTGAAACCAAAGGATGTTTTTGAAAAGTATTTCAATTGACATTAATCAAAACAGAATAATAATAGCTAGAAGGTTTTGAGCGGGGATACCAGGTTGTATTTGTATCTGACTATCTTCCAATCCTCATGATAACTTCCCTTGCTATTGCGTCCTCTTCAGCACCGTCTTATAATGATTTATAAATACAATTCTCAGATTGGTTTCTTCTCTGGGCGGAAGAGGGAGAGCATTTTCAAGTCTCCGGACGATCCGAATGGGAAGGTTGGTGTGACTGGAAGTGGGAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACCGTGGAGATGGATGATTAAAGTGAGGTTAGATTTTGTAGGTTGCTGCTTTCTTTGTATGTATCTTCATTTAGTATCCAATCCATTTGTATGGTTAGATTCATATAATGTGCTAAAAGTTTAGGTGGGGGGATTCCCTTCCGGTAGGTGTTTTCTTATGCCATGACGGATCCTTTTTCCTTTGACGTTTTTATGTTTACTTTTTCTATTTCCTTAAATTTAATGGGCTATGCACATTTACGTGGAAAATCCAATCAATTGTGTTCAAA

mRNA sequence

CATAAGGGCTGCGTTCTTAATCGCGGGGAAGGTGGCGTTGTGTGTGTTTTTCTCTTCATCATCCTCTGATTCTCGTTCTGATTTTTCCAATTTTACGCTCTTTTTCTTCCTTCTCCCATCTGTTCATCCTTGCAAAATTTTCTCCCACACAATTCTGTAGTTTCAACTTCTGAATTCATCTTCTACCAAAATGCAAGGAGGAGAAGATGTAAGCATTGAAGAGTTGGCTAATAATCTCTCTACCTACAAGGACCAGCTTCAGCAGGTCAGACAGCTGTTAGATGATGACCCTAGCAACTCTGAATACATAGATATGGAAAAGGAGCTTGAAGAGAAACATTGGACTTGGGCTAAAGTTGCAGTAATGCAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTGGAAACAGGGTGGAAAAGTCTGCTTTGTGGAGAAGGGACATTGCTTCCAAATTTGGCACTTATTTTTGTGGTAACAAAGCTGGAACCCGTTCTATGTCCCCTGCCGAAGGCCCACGGAAAGCCCTGGTGGATTAGCATGTGGCTGTTGCTCTTGGAAACGGTCGTTCTATCTCCTTTTGGTATGATTCTTTGGCGAGCAAACTGCAACCATTTTGAGATACAATTTCTTGAATGGTATTTTCTTTTGTCTGCATTCATCAACCTGATGAAAAAATTGGAGTTCATATCACCCTCGTACGATGCTACAATTGAAGCCCACACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAGCAGGATATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCGCGAAATTTACCATCAAAGCTTCGAATTGAACCCGATGATCCTGAGGACGTAAAAGCCACCAAACGCAAGAAAATTCATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACTCAAAACAAACGGCAGAATGCTTGGCAGCAATTTCAATCCGCAAAAGGCAAGTCTAAGAAGATTGGTTTCTTCTCTGGGCGGAAGAGGGAGAGCATTTTCAAGTCTCCGGACGATCCGAATGGGAAGGTTGGTGTGACTGGAAGTGGGAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACCGTGGAGATGGATGATTAAAGTGAGGTTAGATTTTGTAGGTTGCTGCTTTCTTTGTATGTATCTTCATTTAGTATCCAATCCATTTGTATGGTTAGATTCATATAATGTGCTAAAAGTTTAGGTGGGGGGATTCCCTTCCGGTAGGTGTTTTCTTATGCCATGACGGATCCTTTTTCCTTTGACGTTTTTATGTTTACTTTTTCTATTTCCTTAAATTTAATGGGCTATGCACATTTACGTGGAAAATCCAATCAATTGTGTTCAAA

Coding sequence (CDS)

ATGCAAGGAGGAGAAGATGTAAGCATTGAAGAGTTGGCTAATAATCTCTCTACCTACAAGGACCAGCTTCAGCAGGTCAGACAGCTGTTAGATGATGACCCTAGCAACTCTGAATACATAGATATGGAAAAGGAGCTTGAAGAGAAACATTGGACTTGGGCTAAAGTTGCAGTAATGCAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTGGAAACAGGGTGGAAAAGTCTGCTTTGTGGAGAAGGGACATTGCTTCCAAATTTGGCACTTATTTTTGTGGTAACAAAGCTGGAACCCGTTCTATGTCCCCTGCCGAAGGCCCACGGAAAGCCCTGGTGGATTAGCATGTGGCTGTTGCTCTTGGAAACGGTCGTTCTATCTCCTTTTGGTATGATTCTTTGGCGAGCAAACTGCAACCATTTTGAGATACAATTTCTTGAATGGTATTTTCTTTTGTCTGCATTCATCAACCTGATGAAAAAATTGGAGTTCATATCACCCTCGTACGATGCTACAATTGAAGCCCACACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAGCAGGATATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCGCGAAATTTACCATCAAAGCTTCGAATTGAACCCGATGATCCTGAGGACGTAAAAGCCACCAAACGCAAGAAAATTCATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACTCAAAACAAACGGCAGAATGCTTGGCAGCAATTTCAATCCGCAAAAGGCAAGTCTAAGAAGATTGGTTTCTTCTCTGGGCGGAAGAGGGAGAGCATTTTCAAGTCTCCGGACGATCCGAATGGGAAGGTTGGTGTGACTGGAAGTGGGAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACCGTGGAGATGGATGATTAA

Protein sequence

MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAHGKPWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPSYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD

Homology

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BLAST of CmUC11G204120 vs. NCBI nr
Match: KAG7032438.1 (Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 462.2 bits (1188), Expect = 4.0e-126
Identity = 266/374 (71.12%), Postives = 276/374 (73.80%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE------------ 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVVYFCPPRYILT 60

Query: 61  KHWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTK 120
             WTWAKVAVMQVIALTEELLSTAKQNEISGSNVETG  S            ++ F  TK
Sbjct: 61  ATWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDS-----------ASISFQQTK 120

Query: 121 LEPVLCPLPKAHGKPWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFI 180
                       G            E   +      +W  +         EW        
Sbjct: 121 ------------GNKMEAESMCDYHEKFPIGTKVQAVWSEDG--------EW-------- 180

Query: 181 NLMKKLEFISPSYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMA 240
                       YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMA
Sbjct: 181 ------------YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMA 240

Query: 241 EATKQDIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEV 300
           EATKQ IKRKIAQAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEV
Sbjct: 241 EATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEV 300

Query: 301 TQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKRE 360
           TQNKRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKRE
Sbjct: 301 TQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKRE 323

Query: 361 KHLHLKGATVEMDD 363
           KHLHLKGA+VEMDD
Sbjct: 361 KHLHLKGASVEMDD 323

[Close]

BLAST of CmUC11G204120 vs. NCBI nr
Match: XP_004142808.1 (survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus] >KGN51867.2 hypothetical protein Csa_008126 [Cucumis sativus])

HSP 1 Score: 442.6 bits (1137), Expect = 3.3e-120
Identity = 258/365 (70.68%), Postives = 265/365 (72.60%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVSIEELANNLSTYKDQL QVRQLLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAH 120
           VIALTEELLSTAKQNE+SGSNVETG  S   G      N          E     +   H
Sbjct: 61  VIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQSKEN----------EMEAGSMSDYH 120

Query: 121 GKPWWISMWLLLLETVVLSPFG---MILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFI 180
            K                 P G     +W  +         EW                 
Sbjct: 121 EK----------------FPIGTKVQAVWSEDG--------EW----------------- 180

Query: 181 SPSYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKR 240
              YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN LLEAER+AEATKQ IKR
Sbjct: 181 ---YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNPLLEAERVAEATKQAIKR 240

Query: 241 KIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW 300
           KIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW
Sbjct: 241 KIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW 299

Query: 301 QQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAT 360
           QQFQ+AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAT
Sbjct: 301 QQFQTAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAT 299

Query: 361 VEMDD 363
           VEMD+
Sbjct: 361 VEMDE 299

[Close]

BLAST of CmUC11G204120 vs. NCBI nr
Match: XP_038876515.1 (survival of motor neuron-related-splicing factor 30 [Benincasa hispida])

HSP 1 Score: 441.4 bits (1134), Expect = 7.4e-120
Identity = 259/365 (70.96%), Postives = 264/365 (72.33%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAH 120
           VIALTEELLSTAKQNEI GSNVETG  S          N          E     +   H
Sbjct: 61  VIALTEELLSTAKQNEIPGSNVETGDDSASISFHQPKEN----------EMEAGSMSDYH 120

Query: 121 GKPWWISMWLLLLETVVLSPFG---MILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFI 180
            K                 P G     +W  +         EW                 
Sbjct: 121 EK----------------FPIGSKVQAVWSEDG--------EW----------------- 180

Query: 181 SPSYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKR 240
              YDATIEAHTVNGFYVSYDGWGNKEEVDPANVR IQLEVNALLEAER+AEATKQ IKR
Sbjct: 181 ---YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRAIQLEVNALLEAERVAEATKQAIKR 240

Query: 241 KIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW 300
           KIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW
Sbjct: 241 KIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW 299

Query: 301 QQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAT 360
           QQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAT
Sbjct: 301 QQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAT 299

Query: 361 VEMDD 363
           VEMD+
Sbjct: 361 VEMDE 299

[Close]

BLAST of CmUC11G204120 vs. NCBI nr
Match: XP_022933076.1 (survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022998367.1 survival of motor neuron-related-splicing factor 30 [Cucurbita maxima] >XP_023530530.1 survival of motor neuron-related-splicing factor 30 [Cucurbita pepo subsp. pepo] >KAG6601669.1 Survival of motor neuron-related-splicing factor 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 441.0 bits (1133), Expect = 9.6e-120
Identity = 256/362 (70.72%), Postives = 266/362 (73.48%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAH 120
           VIALTEELLSTAKQNEISGSNVETG  S            ++ F  TK            
Sbjct: 61  VIALTEELLSTAKQNEISGSNVETGDDS-----------ASISFQQTK------------ 120

Query: 121 GKPWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPS 180
           G            E   +      +W  +         EW                    
Sbjct: 121 GNKMEAESMSDYHEKFPIGTKVQAVWSEDG--------EW-------------------- 180

Query: 181 YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIA 240
           YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQ IKRKIA
Sbjct: 181 YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIA 240

Query: 241 QAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 300
           QAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF
Sbjct: 241 QAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 299

Query: 301 QSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEM 360
           QSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEM
Sbjct: 301 QSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEM 299

Query: 361 DD 363
           DD
Sbjct: 361 DD 299

[Close]

BLAST of CmUC11G204120 vs. NCBI nr
Match: XP_022155149.1 (survival of motor neuron-related-splicing factor 30 [Momordica charantia])

HSP 1 Score: 439.5 bits (1129), Expect = 2.8e-119
Identity = 255/362 (70.44%), Postives = 268/362 (74.03%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVSIEELA+NLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAH 120
           VI+LTEELL+TAKQNEISGSNVETG  S            ++ F+ +K   +       H
Sbjct: 61  VISLTEELLATAKQNEISGSNVETGDNS-----------ASISFLQSKETKMEAESLSDH 120

Query: 121 GKPWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPS 180
            + + I   +              +W  +         EW                    
Sbjct: 121 HEKFPIGSKV------------QAVWSEDG--------EW-------------------- 180

Query: 181 YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIA 240
           YDATIEAHTVNGFYVSYD WGNKEEVDPANVR IQ EVNALLEAERMAEATKQ IKRKIA
Sbjct: 181 YDATIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIA 240

Query: 241 QAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 300
           QAASVDFQSRNLP KLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF
Sbjct: 241 QAASVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 299

Query: 301 QSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEM 360
           QSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEM
Sbjct: 301 QSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEM 299

Query: 361 DD 363
           DD
Sbjct: 361 DD 299

[Close]

BLAST of CmUC11G204120 vs. ExPASy TrEMBL
Match: A0A6J1K7R2 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 GN=LOC111493029 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 4.7e-120
Identity = 256/362 (70.72%), Postives = 266/362 (73.48%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAH 120
           VIALTEELLSTAKQNEISGSNVETG  S            ++ F  TK            
Sbjct: 61  VIALTEELLSTAKQNEISGSNVETGDDS-----------ASISFQQTK------------ 120

Query: 121 GKPWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPS 180
           G            E   +      +W  +         EW                    
Sbjct: 121 GNKMEAESMSDYHEKFPIGTKVQAVWSEDG--------EW-------------------- 180

Query: 181 YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIA 240
           YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQ IKRKIA
Sbjct: 181 YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIA 240

Query: 241 QAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 300
           QAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF
Sbjct: 241 QAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 299

Query: 301 QSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEM 360
           QSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEM
Sbjct: 301 QSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEM 299

Query: 361 DD 363
           DD
Sbjct: 361 DD 299

[Close]

BLAST of CmUC11G204120 vs. ExPASy TrEMBL
Match: A0A6J1EY48 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=3662 GN=LOC111439780 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 4.7e-120
Identity = 256/362 (70.72%), Postives = 266/362 (73.48%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAH 120
           VIALTEELLSTAKQNEISGSNVETG  S            ++ F  TK            
Sbjct: 61  VIALTEELLSTAKQNEISGSNVETGDDS-----------ASISFQQTK------------ 120

Query: 121 GKPWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPS 180
           G            E   +      +W  +         EW                    
Sbjct: 121 GNKMEAESMSDYHEKFPIGTKVQAVWSEDG--------EW-------------------- 180

Query: 181 YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIA 240
           YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQ IKRKIA
Sbjct: 181 YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIA 240

Query: 241 QAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 300
           QAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF
Sbjct: 241 QAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 299

Query: 301 QSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEM 360
           QSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEM
Sbjct: 301 QSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEM 299

Query: 361 DD 363
           DD
Sbjct: 361 DD 299

[Close]

BLAST of CmUC11G204120 vs. ExPASy TrEMBL
Match: A0A6J1DPE2 (survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=3673 GN=LOC111022290 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.4e-119
Identity = 255/362 (70.44%), Postives = 268/362 (74.03%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGEDVSIEELA+NLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE            
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAH 120
           VI+LTEELL+TAKQNEISGSNVETG  S            ++ F+ +K   +       H
Sbjct: 61  VISLTEELLATAKQNEISGSNVETGDNS-----------ASISFLQSKETKMEAESLSDH 120

Query: 121 GKPWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPS 180
            + + I   +              +W  +         EW                    
Sbjct: 121 HEKFPIGSKV------------QAVWSEDG--------EW-------------------- 180

Query: 181 YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIA 240
           YDATIEAHTVNGFYVSYD WGNKEEVDPANVR IQ EVNALLEAERMAEATKQ IKRKIA
Sbjct: 181 YDATIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIA 240

Query: 241 QAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 300
           QAASVDFQSRNLP KLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF
Sbjct: 241 QAASVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQF 299

Query: 301 QSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEM 360
           QSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEM
Sbjct: 301 QSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEM 299

Query: 361 DD 363
           DD
Sbjct: 361 DD 299

[Close]

BLAST of CmUC11G204120 vs. ExPASy TrEMBL
Match: A0A1S3CD96 (survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.7e-106
Identity = 227/317 (71.61%), Postives = 232/317 (73.19%), Query Frame = 0


Query: 49  KHWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTK 108
           KHWTWAKVAVMQVIALTEELLSTAKQNE+SGSNVETG  S   G      N         
Sbjct: 12  KHWTWAKVAVMQVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKEN--------- 71

Query: 109 LEPVLCPLPKAHGKPWWISMWLLLLETVVLSPFG---MILWRANCNHFEIQFLEWYFLLS 168
            E     +   H K                 P G     +W  +         EW     
Sbjct: 72  -EMEAGSMSDYHEK----------------FPIGTKVQAVWSEDG--------EW----- 131

Query: 169 AFINLMKKLEFISPSYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 228
                          YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE
Sbjct: 132 ---------------YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 191

Query: 229 RMAEATKQDIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 288
           RMAEATKQ IKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ
Sbjct: 192 RMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 251

Query: 289 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 348
           LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ
Sbjct: 252 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 274

Query: 349 KREKHLHLKGATVEMDD 363
           KREKHLHLKGATVEMD+
Sbjct: 312 KREKHLHLKGATVEMDE 274

[Close]

BLAST of CmUC11G204120 vs. ExPASy TrEMBL
Match: A0A445EKP3 (Tudor domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g000607 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 6.3e-101
Identity = 225/366 (61.48%), Postives = 253/366 (69.13%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQ 60
           MQGGE+VSIEELA+NLSTYKDQL QVRQLL D+P NSEY+DME+EL E            
Sbjct: 1   MQGGEEVSIEELASNLSTYKDQLHQVRQLLKDEPGNSEYVDMERELNE------------ 60

Query: 61  VIALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAH 120
           VIALTEELL+TAKQNEI GSN                PN +    ++K        PK +
Sbjct: 61  VIALTEELLATAKQNEICGSNAG--------------PNASAPSTLSK--------PKDN 120

Query: 121 GKPWWISMWLLLLETVVLSPFG---MILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFI 180
                IS      +     P G     +W  +         EW                 
Sbjct: 121 EVEREIS-----YDHQDKYPIGSKVQAVWSEDG--------EW----------------- 180

Query: 181 SPSYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQL-EVNALLEAERMAEATKQDIK 240
              YDATIEA+T NG++VSYD WGNKEEVDPAN+R IQ   V+ALLEAER+AEATKQ IK
Sbjct: 181 ---YDATIEAYTPNGYFVSYDNWGNKEEVDPANIRPIQEGTVDALLEAERVAEATKQAIK 240

Query: 241 RKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNA 300
           RKIAQAA++D QSR+LP+KLRIEPDDPEDVKA+KRKKIHAFKSKMR+EQLEVTQNKRQNA
Sbjct: 241 RKIAQAATIDVQSRSLPAKLRIEPDDPEDVKASKRKKIHAFKSKMRMEQLEVTQNKRQNA 299

Query: 301 WQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA 360
           WQQFQS KGK+KKIGFFSGRKRESIFKSPDDP+GKVGVTGSGKGLTEFQKREKH HLK  
Sbjct: 301 WQQFQSTKGKAKKIGFFSGRKRESIFKSPDDPHGKVGVTGSGKGLTEFQKREKHFHLKDG 299

Query: 361 TVEMDD 363
           TVE D+
Sbjct: 361 TVESDE 299

[Close]

BLAST of CmUC11G204120 vs. TAIR 10
Match: AT2G02570.1 (nucleic acid binding;RNA binding )

HSP 1 Score: 318.5 bits (815), Expect = 6.7e-87
Identity = 194/360 (53.89%), Postives = 236/360 (65.56%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVI 62
           G E++SIE+LA+++STYK+QL+QVRQLL +DP NSEY DMEKEL+E            VI
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE------------VI 63

Query: 63  ALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAHGK 122
           ALTEE+L+TAKQNEIS S+      S     G+  P+L   +  T L       P   GK
Sbjct: 64  ALTEEVLATAKQNEISLSDAGV---SAEATPGS--PDLEGAWEKTGLRND----PIHEGK 123

Query: 123 PWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPSYD 182
                     + T V + F                 EW                    YD
Sbjct: 124 --------FPVGTKVQAVFS-------------DDGEW--------------------YD 183

Query: 183 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQA 242
           ATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK  +KRKI +A
Sbjct: 184 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKA 243

Query: 243 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 302
           AS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+
Sbjct: 244 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQT 299

Query: 303 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 362
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E  D
Sbjct: 304 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAEGTD 299

[Close]

BLAST of CmUC11G204120 vs. TAIR 10
Match: AT2G02570.2 (nucleic acid binding;RNA binding )

HSP 1 Score: 318.5 bits (815), Expect = 6.7e-87
Identity = 194/360 (53.89%), Postives = 236/360 (65.56%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVI 62
           G E++SIE+LA+++STYK+QL+QVRQLL +DP NSEY DMEKEL+E            VI
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE------------VI 63

Query: 63  ALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAHGK 122
           ALTEE+L+TAKQNEIS S+      S     G+  P+L   +  T L       P   GK
Sbjct: 64  ALTEEVLATAKQNEISLSDAGV---SAEATPGS--PDLEGAWEKTGLRND----PIHEGK 123

Query: 123 PWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPSYD 182
                     + T V + F                 EW                    YD
Sbjct: 124 --------FPVGTKVQAVFS-------------DDGEW--------------------YD 183

Query: 183 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQA 242
           ATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK  +KRKI +A
Sbjct: 184 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKA 243

Query: 243 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 302
           AS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+
Sbjct: 244 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQT 299

Query: 303 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 362
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E  D
Sbjct: 304 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAEGTD 299

[Close]

BLAST of CmUC11G204120 vs. TAIR 10
Match: AT2G02570.4 (nucleic acid binding;RNA binding )

HSP 1 Score: 318.5 bits (815), Expect = 6.7e-87
Identity = 194/360 (53.89%), Postives = 236/360 (65.56%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVI 62
           G E++SIE+LA+++STYK+QL+QVRQLL +DP NSEY DMEKEL+E            VI
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE------------VI 63

Query: 63  ALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAHGK 122
           ALTEE+L+TAKQNEIS S+      S     G+  P+L   +  T L       P   GK
Sbjct: 64  ALTEEVLATAKQNEISLSDAGV---SAEATPGS--PDLEGAWEKTGLRND----PIHEGK 123

Query: 123 PWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPSYD 182
                     + T V + F                 EW                    YD
Sbjct: 124 --------FPVGTKVQAVFS-------------DDGEW--------------------YD 183

Query: 183 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQA 242
           ATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK  +KRKI +A
Sbjct: 184 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKA 243

Query: 243 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 302
           AS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQQFQ+
Sbjct: 244 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQT 299

Query: 303 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 362
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E  D
Sbjct: 304 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAEGTD 299

[Close]

BLAST of CmUC11G204120 vs. TAIR 10
Match: AT2G02570.3 (nucleic acid binding;RNA binding )

HSP 1 Score: 292.7 bits (748), Expect = 4.0e-79
Identity = 184/360 (51.11%), Postives = 226/360 (62.78%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEKHWTWAKVAVMQVI 62
           G E++SIE+LA+++STYK+QL+QVRQLL +DP NSEY DMEKEL+E            VI
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE------------VI 63

Query: 63  ALTEELLSTAKQNEISGSNVETGWKSLLCGEGTLLPNLALIFVVTKLEPVLCPLPKAHGK 122
           ALTEE+L+TAKQNEIS S+      S     G+  P+L   +  T L       P   GK
Sbjct: 64  ALTEEVLATAKQNEISLSDAGV---SAEATPGS--PDLEGAWEKTGLRND----PIHEGK 123

Query: 123 PWWISMWLLLLETVVLSPFGMILWRANCNHFEIQFLEWYFLLSAFINLMKKLEFISPSYD 182
                     + T V + F                 EW                    YD
Sbjct: 124 --------FPVGTKVQAVFS-------------DDGEW--------------------YD 183

Query: 183 ATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQA 242
           ATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK  +KRKI +A
Sbjct: 184 ATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRKIEKA 243

Query: 243 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 302
           AS D+Q++ LP+KL+I+P+DPEDVK  KRKKIH            V QNK+QN WQQFQ+
Sbjct: 244 ASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIH------------VVQNKKQNDWQQFQT 287

Query: 303 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 362
            K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    E  D
Sbjct: 304 TKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAEGTD 287

The following BLAST results are available for this feature:

BLAST of CmUC11G204120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032438.1	4.0e-126	71.12	Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subs...	[more]
XP_004142808.1	3.3e-120	70.68	survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus]...	[more]
XP_038876515.1	7.4e-120	70.96	survival of motor neuron-related-splicing factor 30 [Benincasa hispida]	[more]
XP_022933076.1	9.6e-120	70.72	survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022...	[more]
XP_022155149.1	2.8e-119	70.44	survival of motor neuron-related-splicing factor 30 [Momordica charantia]	[more]

BLAST of CmUC11G204120 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC11G204120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7R2	4.7e-120	70.72	survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EY48	4.7e-120	70.72	survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=366...	[more]
A0A6J1DPE2	1.4e-119	70.44	survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=36...	[more]
A0A1S3CD96	1.7e-106	71.61	survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo O...	[more]
A0A445EKP3	6.3e-101	61.48	Tudor domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g000607 PE...	[more]

BLAST of CmUC11G204120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02570.1	6.7e-87	53.89	nucleic acid binding;RNA binding	[more]
AT2G02570.2	6.7e-87	53.89	nucleic acid binding;RNA binding	[more]
AT2G02570.4	6.7e-87	53.89	nucleic acid binding;RNA binding	[more]
AT2G02570.3	4.0e-79	51.11	nucleic acid binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	COILS	Coil	Coil	coord: 221..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..339
None	No IPR available	PANTHER	PTHR13681:SF32	BNAA06G34090D PROTEIN	coord: 1..83 coord: 180..355
None	No IPR available	PANTHER	PTHR13681	SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED	coord: 1..83 coord: 180..355
IPR002999	Tudor domain	CDD	cd04508	TUDOR	coord: 181..212 e-value: 0.00742092 score: 32.1848

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G204120.1	CmUC11G204120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus