CmUC11G204040 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAGCTCAATTGCTATTGACAAGTTTGATGGGACAAATTTTGATTACTGGAAGATGCAAAAAAATGATTATCTGCATATCATAGGCAACGAGTTTCATATACCATTGAATGGAAAACCAGAAAGTATGAAAGAAGAAGATTGGAGGATCATTGACAAAAAAGTACTAGGGATTATTCGCTTGACTTTGTCAAGGAATGTTTTTGACCATGTGGCAAATGAGAAGACGACAATTGGTCTGATGAAAACTTTGTCAGATATATATGAGAAGCCTTATTTCAACAAGTTATACCTTGTCACTAAACTCATGGATCTGAAAATGGTCGAAGGTGTGCCTTTTGTGGAACATTTGATTGAATTCGATAGGATCATTTAAAAGTTAAGCTTGATGAAGGTTGAGTTCAACAAAGAATTCACTTCTATCCTTTTGTTTAATTCGTTACCTGACAGTTGGGAATCTATGAAAGTAGCTTTACCTTTCTCTTTAGGTACAAGAAAATTGAAAATTGAAGATATTATAGATGCAGCTTTTGCAGAAGAGATACATAGAAGACATTTTGGTATGACTTCTACTCCAAATTCAAGCTTCAAAGTTGGGAGAGAGAGGGAAAACTATAAAAAGTGAACCTCATAAAGGCAAAGGCAACAAAGGTAGAGAAAAGGAGAAGCAGAAAATTGAGTGCTACTACTACCACAAGCAGGGTCACATTAAAGCATATTGTTGAAAGTTGACGAAAGTTGAAGAAAGAGCAAAAAGATAACTCCTAAGTAGCATGTTGGTTTAGCTTATTTGGAGGCACTTTCTCTAGAAGTTCAATTGATGTAAATCACATAGTTTGGGTAGATGCATATTTAGAGGAAGTAGAGAAGATTTTGATTTTGATTTTTGAGCTGGTTTTTGAAGGCAGGACAAATTTGAGAGTTGTGTGCTTGAGTTTTCTCTTGTTTTTTTTTTATGATCTTTATTCTCATAGTAAACATATAGAGCTTATGAAATATCAGACATAGCTATTCGAAGTGTGAACCTGTATAATTATGTAAGTATTTCTCCACTTTTCCTTTCTTTGTTATATATCTTTTAGATAGAGCAACACCGCCTCCATTTTGTCTCTTTCAGTCAATTGATTCAAAATAAAATAGTGGTCTACTTGATACAACCAGCCATCCAGATCTTCCCCTTCTTCTCCTGTATAAAACGACAACTTTAACTTCCTCATTTTCATATAAAACAAAGGAATTCTCAATTACCAGGTGCACATATACCTTCATTGCTCATGGTACTCTTTTCTTGGTCTTCCCTTCCTTTTCATATGGAATCATCATCAACTACACACTTACCCTTATCTGATTGTATCCCTTCTAAAGTTTTTCCCCTCTCCATGTTCATCCATACTTGTGCTCGAGAAATTACCCTTGAATCAATGCAGTTTGGAAATCCATCTTCACTTCTAGTGCTACGTTCCTCCCCTAGTTTTTTGCAAACTGAGAATCCATTTTTGCTCCCATCTTCGACTGCTTAA ATGTCTAGCTCAATTGCTATTGACAAGTTTGATGGGACAAATTTTGATTACTGGAAGATGCAAAAAAATGATTATCTGCATATCATAGGCAACGAGTTTCATATACCATTGAATGGAAAACCAGAAAGTATGAAAGAAGAAGATTGGAGGATCATTGACAAAAAAGTACTAGGGATTATTCGCTTGACTTTGTCAAGGAATGTTTTTGACCATGTGGCAAATGAGAAGACGACAATTGGTCTGATGAAAACTTTGTCAGATATATATGAGAAGCCTTATTTCAACAAGTTATACCTTGTCACTAAACTCATGGATCTGAAAATGGTCGAAGGTGCACATATACCTTCATTGCTCATGGTACTCTTTTCTTGGTCTTCCCTTCCTTTTCATATGGAATCATCATCAACTACACACTTACCCTTATCTGATTGTATCCCTTCTAAAGTTTTTCCCCTCTCCATGTTCATCCATACTTGTGCTCGAGAAATTACCCTTGAATCAATGCAGTTTGGAAATCCATCTTCACTTCTAGTGCTACGTTCCTCCCCTAGTTTTTTGCAAACTGAGAATCCATTTTTGCTCCCATCTTCGACTGCTTAA ATGTCTAGCTCAATTGCTATTGACAAGTTTGATGGGACAAATTTTGATTACTGGAAGATGCAAAAAAATGATTATCTGCATATCATAGGCAACGAGTTTCATATACCATTGAATGGAAAACCAGAAAGTATGAAAGAAGAAGATTGGAGGATCATTGACAAAAAAGTACTAGGGATTATTCGCTTGACTTTGTCAAGGAATGTTTTTGACCATGTGGCAAATGAGAAGACGACAATTGGTCTGATGAAAACTTTGTCAGATATATATGAGAAGCCTTATTTCAACAAGTTATACCTTGTCACTAAACTCATGGATCTGAAAATGGTCGAAGGTGCACATATACCTTCATTGCTCATGGTACTCTTTTCTTGGTCTTCCCTTCCTTTTCATATGGAATCATCATCAACTACACACTTACCCTTATCTGATTGTATCCCTTCTAAAGTTTTTCCCCTCTCCATGTTCATCCATACTTGTGCTCGAGAAATTACCCTTGAATCAATGCAGTTTGGAAATCCATCTTCACTTCTAGTGCTACGTTCCTCCCCTAGTTTTTTGCAAACTGAGAATCCATTTTTGCTCCCATCTTCGACTGCTTAA MSSSIAIDKFDGTNFDYWKMQKNDYLHIIGNEFHIPLNGKPESMKEEDWRIIDKKVLGIIRLTLSRNVFDHVANEKTTIGLMKTLSDIYEKPYFNKLYLVTKLMDLKMVEGAHIPSLLMVLFSWSSLPFHMESSSTTHLPLSDCIPSKVFPLSMFIHTCAREITLESMQFGNPSSLLVLRSSPSFLQTENPFLLPSSTA Homology
BLAST of CmUC11G204040 vs. NCBI nr
Match: CAN81130.1 (hypothetical protein VITISV_003944 [Vitis vinifera]) HSP 1 Score: 125.6 bits (314), Expect = 4.9e-25 Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of CmUC11G204040 vs. NCBI nr
Match: KAG7593230.1 (Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 125.6 bits (314), Expect = 4.9e-25 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of CmUC11G204040 vs. NCBI nr
Match: KAG7584790.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 125.6 bits (314), Expect = 4.9e-25 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of CmUC11G204040 vs. NCBI nr
Match: KAG7561662.1 (Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 125.6 bits (314), Expect = 4.9e-25 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of CmUC11G204040 vs. NCBI nr
Match: RVX10218.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 125.6 bits (314), Expect = 4.9e-25 Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = 0
BLAST of CmUC11G204040 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09 Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of CmUC11G204040 vs. ExPASy TrEMBL
Match: A0A0D3CS45 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.8e-25 Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of CmUC11G204040 vs. ExPASy TrEMBL
Match: A0A0D3AMG5 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.8e-25 Identity = 73/176 (41.48%), Postives = 109/176 (61.93%), Query Frame = 0
BLAST of CmUC11G204040 vs. ExPASy TrEMBL
Match: A0A438JMM5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2179 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 2.4e-25 Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = 0
BLAST of CmUC11G204040 vs. ExPASy TrEMBL
Match: A5BGX3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_003944 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 2.4e-25 Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of CmUC11G204040 vs. ExPASy TrEMBL
Match: A5BC72 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_006839 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 3.1e-25 Identity = 64/110 (58.18%), Postives = 83/110 (75.45%), Query Frame = 0
BLAST of CmUC11G204040 vs. TAIR 10
Match: AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 91.7 bits (226), Expect = 7.4e-19 Identity = 43/88 (48.86%), Postives = 63/88 (71.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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