CmUC11G203860 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G203860
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	TPD1 protein homolog 1-like
Location	CmU531Chr11: 84578 .. 85772 (-)
RNA-Seq Expression	CmUC11G203860
Synteny	CmUC11G203860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAGGCTGCGGCAACTTCGTTGTTTGGAGCTTCAATTTTATTCCATCTCCTTTTACTTGCATCCTTTCATTCTATAGGTACCATCTTTTCTTATTTCCATGCAATTTTACAATTTTTAAAAATTTTTTAAAACATACAATAATTTGATGAATTCTCCTGGCTTCATAATTTTTTGGTTTTTTTTATTGCTCTTTAAAATTGTGTTTGCTTTTATTACCATTTCTTTACCGCATAGTCTTCTTAACAGATTAATTAATAATCAAATTTTAAAAACAAAAATAAATTTTTAAAAATTATATTTAGAAAGAAAAAAAAGTTGGAAGTAAATCTTGGATAAAAACACATAGTTGGAAATAATGTTTATAATTAAACTTACTTTTCAAAAACTAAAAATAAGCTCCGTTTTGTAACTATTTAAGTTTTTGTTTTTAAAAATTAAACCTATACGCACTACTTTAACTCTAAATTTACTTTTTATCAATGCTTTAAAAGACTAACTTGCTTACTATTGTACTGAAAAGTGTAAGAAATGAGGAAAAAATAACCTTAATTTCCAAAAACAAAAACAAAAAATGAGATACTTACTAAACATGGCTTAAATGGTTATGAAACACAATGAAACTTAAGAAATCACGCCCTACATTAAAAAGTTAAATCGTTATAAAACATAGTGTTCGTTTGAATTTGTTGTCCAATGCATGGAAGTATAAAAGCTTTAAACTAGTTATTTAGTAATTATGAAAATCATGATTTTAATGAAACCTATAACGTGGACGTGGATAATATAAGTTTATATTAAAAGAAAAAGTGATTTGTGATTAGTAGTAGTAAATGATGAAGAGTGATTGAATTAATCAGGTGGAACATTAGAGGAAAAATGCGAAAAGAATTCGATAGCAATAAGCCAAGGAGAAGGGGGGCGGCAGTTCAATGGGATACCAACGTATATAGTGGAGATAACAAACCAATGCAGGAACAATTGCAGCATCTACGATTTGCATTTGAAATGTGGATCATTCAGCTCAGCCAAGTTAATAAACCCTCGAATCTTCAAGCGCATTGCGGTCGATGATTGTCTTATCAACAATGGAAGACCCATCCCTCCAGGAATTACTCTTTCTTTTCAATATGCTACTAACTTTCAGTTTCCACTTTCGGTTTCCTCTCTCAAATGTACCAATTCACATTAA

mRNA sequence

ATGGTTAAGGCTGCGGCAACTTCGTTGTTTGGAGCTTCAATTTTATTCCATCTCCTTTTACTTGCATCCTTTCATTCTATAGGTGGAACATTAGAGGAAAAATGCGAAAAGAATTCGATAGCAATAAGCCAAGGAGAAGGGGGGCGGCAGTTCAATGGGATACCAACGTATATAGTGGAGATAACAAACCAATGCAGGAACAATTGCAGCATCTACGATTTGCATTTGAAATGTGGATCATTCAGCTCAGCCAAGTTAATAAACCCTCGAATCTTCAAGCGCATTGCGGTCGATGATTGTCTTATCAACAATGGAAGACCCATCCCTCCAGGAATTACTCTTTCTTTTCAATATGCTACTAACTTTCAGTTTCCACTTTCGGTTTCCTCTCTCAAATGTACCAATTCACATTAA

Coding sequence (CDS)

ATGGTTAAGGCTGCGGCAACTTCGTTGTTTGGAGCTTCAATTTTATTCCATCTCCTTTTACTTGCATCCTTTCATTCTATAGGTGGAACATTAGAGGAAAAATGCGAAAAGAATTCGATAGCAATAAGCCAAGGAGAAGGGGGGCGGCAGTTCAATGGGATACCAACGTATATAGTGGAGATAACAAACCAATGCAGGAACAATTGCAGCATCTACGATTTGCATTTGAAATGTGGATCATTCAGCTCAGCCAAGTTAATAAACCCTCGAATCTTCAAGCGCATTGCGGTCGATGATTGTCTTATCAACAATGGAAGACCCATCCCTCCAGGAATTACTCTTTCTTTTCAATATGCTACTAACTTTCAGTTTCCACTTTCGGTTTCCTCTCTCAAATGTACCAATTCACATTAA

Protein sequence

MVKAAATSLFGASILFHLLLLASFHSIGGTLEEKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIFKRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKCTNSH

Homology

[Close]

BLAST of CmUC11G203860 vs. NCBI nr
Match: RZC59460.1 (hypothetical protein C5167_006762 [Papaver somniferum])

HSP 1 Score: 136.0 bits (341), Expect = 2.5e-28
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC K+ I ++QG      NGIPTY VEI N C + C I  +HL CG FSSA+LINPR+F
Sbjct: 101 EKCSKSDIIVNQGSTSPLPNGIPTYTVEIMNVCVSGCDISRIHLSCGWFSSARLINPRLF 160

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           KRI  DDC++N+G+P+P G TLSFQYA  F++PLSVSS+ C
Sbjct: 161 KRIRYDDCIVNDGKPLPDGATLSFQYANTFRYPLSVSSVTC 201

[Close]

BLAST of CmUC11G203860 vs. NCBI nr
Match: XP_026379521.1 (protein TAPETUM DETERMINANT 1-like [Papaver somniferum])

HSP 1 Score: 136.0 bits (341), Expect = 2.5e-28
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC K+ I ++QG      NGIPTY VEI N C + C I  +HL CG FSSA+LINPR+F
Sbjct: 96  EKCSKSDIIVNQGSTSPLPNGIPTYTVEIMNVCVSGCDISRIHLSCGWFSSARLINPRLF 155

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           KRI  DDC++N+G+P+P G TLSFQYA  F++PLSVSS+ C
Sbjct: 156 KRIRYDDCIVNDGKPLPDGATLSFQYANTFRYPLSVSSVTC 196

[Close]

BLAST of CmUC11G203860 vs. NCBI nr
Match: XP_026382275.1 (protein TAPETUM DETERMINANT 1-like [Papaver somniferum])

HSP 1 Score: 135.6 bits (340), Expect = 3.3e-28
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC K+ I ++QG      NGIPTY VEI N C + C I  +HL CG FSSA+LINPR+F
Sbjct: 96  EKCSKSDIIVNQGSTSPLPNGIPTYTVEIMNVCVSGCDISRIHLSCGWFSSARLINPRLF 155

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           KRI  DDC++N+G+P+P G TLSFQYA  F++PLSVSS+ C
Sbjct: 156 KRIRYDDCIVNDGKPLPNGATLSFQYANTFRYPLSVSSVTC 196

[Close]

BLAST of CmUC11G203860 vs. NCBI nr
Match: KAF6145072.1 (hypothetical protein GIB67_013423 [Kingdonia uniflora])

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-27
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           E C KN IA+ QG      NGIPTY V+I N C + C+I ++H+ CG FSSA++INPR+F
Sbjct: 85  EICSKNDIALYQGPTTPLPNGIPTYTVQILNVCVSGCAISNIHINCGWFSSARMINPRVF 144

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           KRI  DDCL+NNG PI PG +LSFQYA +FQ+PL VSS+ C
Sbjct: 145 KRICYDDCLVNNGEPIGPGESLSFQYANSFQYPLYVSSVTC 185

[Close]

BLAST of CmUC11G203860 vs. NCBI nr
Match: CAA7037266.1 (unnamed protein product [Microthlaspi erraticum] >CAA7037273.1 unnamed protein product [Microthlaspi erraticum] >CAA7038986.1 unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-27
Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC+++ I ++Q       NGIP Y VEITNQC + C+I  +H+ CG FSSAKLINPR+F
Sbjct: 71  EKCKRSDIVVNQAATEPMPNGIPGYTVEITNQCMSGCNISRIHVSCGWFSSAKLINPRVF 130

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKCT 135
           KRI  DDCL+NNG+P+P G TLSF YA  F +PLSVS + C+
Sbjct: 131 KRIHYDDCLVNNGKPLPYGSTLSFHYANTFPYPLSVSFVTCS 172

[Close]

BLAST of CmUC11G203860 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.6e-28
Identity = 57/101 (56.44%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC+   I ++Q       NGIP Y+VEITNQC + C I  +H+ CG FSSAKLINPR+F
Sbjct: 75  EKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVF 134

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           KRI  DDCL+NNG+P+P G TLSF YA  F + LSV+ + C
Sbjct: 135 KRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]

BLAST of CmUC11G203860 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.9e-27
Identity = 49/101 (48.51%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           + C K+ I + QG      +G+P+Y VEI N C ++C+I ++H+ CG FSS +L+NPR+F
Sbjct: 78  QDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVF 137

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           +R+  DDCL+N+G+P+ PG +LSFQYA +F +PLSV+S+ C
Sbjct: 138 RRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]

BLAST of CmUC11G203860 vs. ExPASy Swiss-Prot
Match: Q8S6P9 (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.8e-20
Identity = 40/101 (39.60%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           + C + ++ + Q       +GIPTY VEI N C   C++YD+H+ CG F+SA+L++P  F
Sbjct: 69  DSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISCGEFASAELVDPSQF 128

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           +RI  +DCL+  G  + P   +SFQY+ +F +PL+V+++ C
Sbjct: 129 QRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]

BLAST of CmUC11G203860 vs. ExPASy Swiss-Prot
Match: Q2QR54 (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19
Identity = 43/102 (42.16%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 38  NSIAISQGEGGRQFNGIPTYIVEITNQCR------NNCSIYDLHLKCGSFSSAKLINPRI 97
           + IAI QG      +G+P Y V++ N+C         C+I  +H++CG FSS  L++PR+
Sbjct: 118 DDIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRV 177

Query: 98  FKRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           F+R+  DDCL+N+GRP+  G T+SF+Y  +F + LSVS   C
Sbjct: 178 FRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]

BLAST of CmUC11G203860 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-05
Identity = 26/70 (37.14%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 59  VEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIFKRI--AVDDCLINNGRPIPPGITLSF 118
           VE+ N+C   C I +L LKC  F  + L++P   + +  +  +C++N+G P+ P  TLSF
Sbjct: 50  VEVMNKC-PMCPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 119 QYATNFQFPL 127
            Y+   QF L
Sbjct: 110 NYSNTHQFAL 117

[Close]

BLAST of CmUC11G203860 vs. ExPASy TrEMBL
Match: A0A4Y7JHE6 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_006762 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.2e-28
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC K+ I ++QG      NGIPTY VEI N C + C I  +HL CG FSSA+LINPR+F
Sbjct: 101 EKCSKSDIIVNQGSTSPLPNGIPTYTVEIMNVCVSGCDISRIHLSCGWFSSARLINPRLF 160

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           KRI  DDC++N+G+P+P G TLSFQYA  F++PLSVSS+ C
Sbjct: 161 KRIRYDDCIVNDGKPLPDGATLSFQYANTFRYPLSVSSVTC 201

[Close]

BLAST of CmUC11G203860 vs. ExPASy TrEMBL
Match: A0A6D2JJ26 (Ribosomal_S5_C domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS24501 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 7.9e-28
Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC+++ I ++Q       NGIP Y VEITNQC + C+I  +H+ CG FSSAKLINPR+F
Sbjct: 71  EKCKRSDIVVNQAATEPMPNGIPGYTVEITNQCMSGCNISRIHVSCGWFSSAKLINPRVF 130

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKCT 135
           KRI  DDCL+NNG+P+P G TLSF YA  F +PLSVS + C+
Sbjct: 131 KRIHYDDCLVNNGKPLPYGSTLSFHYANTFPYPLSVSFVTCS 172

[Close]

BLAST of CmUC11G203860 vs. ExPASy TrEMBL
Match: A0A7J7LRA1 (Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_013423 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 7.9e-28
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           E C KN IA+ QG      NGIPTY V+I N C + C+I ++H+ CG FSSA++INPR+F
Sbjct: 85  EICSKNDIALYQGPTTPLPNGIPTYTVQILNVCVSGCAISNIHINCGWFSSARMINPRVF 144

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           KRI  DDCL+NNG PI PG +LSFQYA +FQ+PL VSS+ C
Sbjct: 145 KRICYDDCLVNNGEPIGPGESLSFQYANSFQYPLYVSSVTC 185

[Close]

BLAST of CmUC11G203860 vs. ExPASy TrEMBL
Match: A0A1J3EQ76 (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR10214_c0_g1_i1_g.33666 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.0e-27
Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC+++ I ++Q       NGIP Y VEITNQC + C I  +H+ CG FSSAKLINPR+F
Sbjct: 138 EKCKRSDIVVNQAATEPMPNGIPGYTVEITNQCMSGCKISRIHVSCGWFSSAKLINPRVF 197

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKCT 135
           KRI  DDCL+NNG+P+P G TLSF YA  F +PLSVS + C+
Sbjct: 198 KRIHYDDCLVNNGKPLPYGSTLSFHYANTFPYPLSVSFVTCS 239

[Close]

BLAST of CmUC11G203860 vs. ExPASy TrEMBL
Match: A0A1J3GVG9 (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=LE_TR17747_c0_g1_i1_g.57233 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.0e-27
Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC+++ I ++Q       NGIP Y VEITNQC + C I  +H+ CG FSSAKLINPR+F
Sbjct: 121 EKCKRSDIVVNQAATEPMPNGIPGYTVEITNQCMSGCKISRIHVSCGWFSSAKLINPRVF 180

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKCT 135
           KRI  DDCL+NNG+P+P G TLSF YA  F +PLSVS + C+
Sbjct: 181 KRIHYDDCLVNNGKPLPYGSTLSFHYANTFPYPLSVSFVTCS 222

[Close]

BLAST of CmUC11G203860 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 )

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 57/101 (56.44%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           EKC+   I ++Q       NGIP Y+VEITNQC + C I  +H+ CG FSSAKLINPR+F
Sbjct: 75  EKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVF 134

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           KRI  DDCL+NNG+P+P G TLSF YA  F + LSV+ + C
Sbjct: 135 KRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]

BLAST of CmUC11G203860 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 122.1 bits (305), Expect = 3.5e-28
Identity = 49/101 (48.51%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 33  EKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIF 92
           + C K+ I + QG      +G+P+Y VEI N C ++C+I ++H+ CG FSS +L+NPR+F
Sbjct: 78  QDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVF 137

Query: 93  KRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSVSSLKC 134
           +R+  DDCL+N+G+P+ PG +LSFQYA +F +PLSV+S+ C
Sbjct: 138 RRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]

BLAST of CmUC11G203860 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 58.5 bits (140), Expect = 4.7e-09
Identity = 36/117 (30.77%), Postives = 56/117 (47.86%), Query Frame = 0


Query: 12  ASILFHLLLLASFHSIGGTLEEKCEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSI 71
           AS    LL L  F +        C  NS+++ Q + G+     P + V +TN C NNC  
Sbjct: 2   ASNACKLLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPC-NNCKF 61

Query: 72  YDLHLKCGSFSSAKLINPRIFKRIAVDDCLINNGRPIPPGITLSFQYATNFQFPLSV 129
            +  L C  F+S   I+  +  + + D CL+N G+ I P + + F+Y  +  F L V
Sbjct: 62  QNTELLCVGFNSVTPIDTSLLLK-SGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKV 116

[Close]

BLAST of CmUC11G203860 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 51.2 bits (121), Expect = 7.6e-07
Identity = 28/94 (29.79%), Postives = 42/94 (44.68%), Query Frame = 0


Query: 35  CEKNSIAISQGEGGRQFNGIPTYIVEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIFKR 94
           C  N +++ Q + G+     P + V +TN C NNC      L C  F S   +   +  +
Sbjct: 25  CHLNYLSVKQSKTGKLVQNKPEWEVRVTNPC-NNCKFQYTKLSCVGFQSVTPVATSLLSK 84

Query: 95  IAVDDCLINNGRPIPPGITLSFQYATNFQFPLSV 129
            + D CL+N G  I P +   F Y  +  F L V
Sbjct: 85  -SGDICLLNAGNFIFPHVDFVFNYVWDTSFDLKV 116

[Close]

BLAST of CmUC11G203860 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 26/70 (37.14%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 59  VEITNQCRNNCSIYDLHLKCGSFSSAKLINPRIFKRI--AVDDCLINNGRPIPPGITLSF 118
           VE+ N+C   C I +L LKC  F  + L++P   + +  +  +C++N+G P+ P  TLSF
Sbjct: 50  VEVMNKC-PMCPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSF 109

Query: 119 QYATNFQFPL 127
            Y+   QF L
Sbjct: 110 NYSNTHQFAL 117

The following BLAST results are available for this feature:

BLAST of CmUC11G203860 vs. NCBI nr


Match Name	E-value	Identity	Description
RZC59460.1	2.5e-28	59.41	hypothetical protein C5167_006762 [Papaver somniferum]	[more]
XP_026379521.1	2.5e-28	59.41	protein TAPETUM DETERMINANT 1-like [Papaver somniferum]	[more]
XP_026382275.1	3.3e-28	59.41	protein TAPETUM DETERMINANT 1-like [Papaver somniferum]	[more]
KAF6145072.1	1.6e-27	59.41	hypothetical protein GIB67_013423 [Kingdonia uniflora]	[more]
CAA7037266.1	1.6e-27	57.84	unnamed protein product [Microthlaspi erraticum] >CAA7037273.1 unnamed protein p...	[more]

BLAST of CmUC11G203860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6TLJ2	2.6e-28	56.44	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
Q1G3T1	4.9e-27	48.51	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
Q8S6P9	5.8e-20	39.60	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
Q2QR54	1.7e-19	42.16	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
A8MS78	1.8e-05	37.14	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of CmUC11G203860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y7JHE6	1.2e-28	59.41	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_006762 PE=4 SV=1	[more]
A0A6D2JJ26	7.9e-28	57.84	Ribosomal_S5_C domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN...	[more]
A0A7J7LRA1	7.9e-28	59.41	Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_013423 PE=4 SV=1	[more]
A0A1J3EQ76	1.0e-27	57.84	Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR102...	[more]
A0A1J3GVG9	1.0e-27	57.84	Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=LE_TR177...	[more]

BLAST of CmUC11G203860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24972.1	1.9e-29	56.44	tapetum determinant 1	[more]
AT1G32583.1	3.5e-28	48.51	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G32110.1	4.7e-09	30.77	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32105.1	7.6e-07	29.79	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT1G05835.1	1.3e-06	37.14	PHD finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 30..133
None	No IPR available	PANTHER	PTHR33184:SF67	PROTEIN TAPETUM DETERMINANT 1	coord: 30..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G203860.1	CmUC11G203860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination
cellular_component	GO:0016020	membrane