CmUC10G203620 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G203620
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	RING-H2 finger protein ATL74-like
Location	CmU531Chr10: 35038797 .. 35039315 (+)
RNA-Seq Expression	CmUC10G203620
Synteny	CmUC10G203620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGATCAAAAACTGCCACGAGGGGTTGTGGAAACAGAGGTGGTGCAGGGGAACAGGACGGGTAATGTGTCTTACGTGGGGGAGATGAATTTCGATGCGCACATGGTTGTAATACTGGCAGCCATATTATGTGCACTCATTGGAGCGGTTGGAGTGAACTCTATTATACGGTGCGCTTTGCGGTGTGGGTATAGGTTCGGCAGGGAGAGGGCTGCTCAGGAGTCGGCACCGGGGCTTAAGAAGCGAGAACTCACTCTGATTCCGATTGGGGTTTATGGAAGTGATGCAAATATTAAGAGCACAGATTGCGGAATTTGCCTCGCTCAGTTTGAGGAGGGCGACAAGCTTAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGTATTGATACCTGGCTCTTGTCTCACTCATCTTGCCCCAACTGCCGCCATTCCGTCAAACCTAAACAACCTGCCCCGCCGCCACCCCATGTCGTTGTGACCATGCCCTATCCCAATTATACCTTGTAA

mRNA sequence

ATGATGGATCAAAAACTGCCACGAGGGGTTGTGGAAACAGAGGTGGTGCAGGGGAACAGGACGGGTAATGTGTCTTACGTGGGGGAGATGAATTTCGATGCGCACATGGTTGTAATACTGGCAGCCATATTATGTGCACTCATTGGAGCGGTTGGAGTGAACTCTATTATACGGTGCGCTTTGCGGTGTGGGTATAGGTTCGGCAGGGAGAGGGCTGCTCAGGAGTCGGCACCGGGGCTTAAGAAGCGAGAACTCACTCTGATTCCGATTGGGGTTTATGGAAGTGATGCAAATATTAAGAGCACAGATTGCGGAATTTGCCTCGCTCAGTTTGAGGAGGGCGACAAGCTTAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGTATTGATACCTGGCTCTTGTCTCACTCATCTTGCCCCAACTGCCGCCATTCCGTCAAACCTAAACAACCTGCCCCGCCGCCACCCCATGTCGTTGTGACCATGCCCTATCCCAATTATACCTTGTAA

Coding sequence (CDS)

ATGATGGATCAAAAACTGCCACGAGGGGTTGTGGAAACAGAGGTGGTGCAGGGGAACAGGACGGGTAATGTGTCTTACGTGGGGGAGATGAATTTCGATGCGCACATGGTTGTAATACTGGCAGCCATATTATGTGCACTCATTGGAGCGGTTGGAGTGAACTCTATTATACGGTGCGCTTTGCGGTGTGGGTATAGGTTCGGCAGGGAGAGGGCTGCTCAGGAGTCGGCACCGGGGCTTAAGAAGCGAGAACTCACTCTGATTCCGATTGGGGTTTATGGAAGTGATGCAAATATTAAGAGCACAGATTGCGGAATTTGCCTCGCTCAGTTTGAGGAGGGCGACAAGCTTAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGTATTGATACCTGGCTCTTGTCTCACTCATCTTGCCCCAACTGCCGCCATTCCGTCAAACCTAAACAACCTGCCCCGCCGCCACCCCATGTCGTTGTGACCATGCCCTATCCCAATTATACCTTGTAA

Protein sequence

MMDQKLPRGVVETEVVQGNRTGNVSYVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAAQESAPGLKKRELTLIPIGVYGSDANIKSTDCGICLAQFEEGDKLRMLPICNHGFHLTCIDTWLLSHSSCPNCRHSVKPKQPAPPPPHVVVTMPYPNYTL

Homology

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BLAST of CmUC10G203620 vs. NCBI nr
Match: XP_008443568.1 (PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 3.8e-58
Identity = 122/170 (71.76%), Postives = 134/170 (78.82%), Query Frame = 0


Query: 2   MDQKLPRGVVETEVVQGNRTGNVS-YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCA 61
           MDQKL RG+ E    QGNRT N S YVGE+NFD HM + LAA+LC LIGAVGVNSI+RC 
Sbjct: 1   MDQKLRRGLTE---AQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCF 60

Query: 62  LRCGYRFGRERAAQE-SAPGLKKRELTLIPIGVYGSDANIKSTDCGICLAQFEEGDKLRM 121
           LRC Y F  ERA ++ SA GLKK+EL LIPIGVYGSDANIKSTDC ICLAQFE GDKLRM
Sbjct: 61  LRCRYSFETERAEEDASAQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRM 120

Query: 122 LPICNHGFHLTCIDTWLLSHSSCPNCRHSVKPKQPAPPPPHVVVTMPYPN 170
           LPICNHGFHLTCIDTWLLS+ SCPNCR SVKP   +   PH+VV +   N
Sbjct: 121 LPICNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTS---PHIVVIIDSVN 164

[Close]

BLAST of CmUC10G203620 vs. NCBI nr
Match: KAA0044224.1 (RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa])

HSP 1 Score: 231.1 bits (588), Expect = 7.2e-57
Identity = 120/164 (73.17%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 2   MDQKLPRGVVETEVVQGNRTGNVS-YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCA 61
           MDQKL RG+ E    QGNRT N S YVGE+NFD HM + LAA+LC LIGAVGVNSI+RC 
Sbjct: 1   MDQKLRRGLTE---AQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCF 60

Query: 62  LRCGYRFGRERAAQE-SAPGLKKRELTLIPIGVYGSDANIKSTDCGICLAQFEEGDKLRM 121
           LR  Y F  ERA ++ SA GLKK+EL LIPIGVYGSDANIKSTDC ICLAQFE GDKLRM
Sbjct: 61  LRRRYSFETERAEEDASAQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRM 120

Query: 122 LPICNHGFHLTCIDTWLLSHSSCPNCRHSVKPKQPAPPPPHVVV 164
           LPICNHGFHLTCIDTWLLS+ SCPNCR SVKP   +   PH+VV
Sbjct: 121 LPICNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTS---PHIVV 158

[Close]

BLAST of CmUC10G203620 vs. NCBI nr
Match: XP_022971293.1 (RING-H2 finger protein ATL74-like [Cucurbita maxima])

HSP 1 Score: 222.2 bits (565), Expect = 3.3e-54
Identity = 121/187 (64.71%), Postives = 138/187 (73.80%), Query Frame = 0


Query: 2   MDQKLPRGVVETEVVQGNRTGNVS-YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCA 61
           MD  LPR ++ TE VQGN T N S YVGEMN DAHMVVILAA+L ALIGA+GVN+++RC 
Sbjct: 1   MDPNLPRRLLATEAVQGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNALVRCV 60

Query: 62  LRCGYRFGRER----AAQESAPGLKKRELTLIPIGVYGSD-ANIKSTDCGICLAQFEEGD 121
           L  G+RF  ER    AA+ +A GLKKREL+ IP+GVYGSD A IK TDC ICL +FE GD
Sbjct: 61  LSLGFRFRTERPEETAARLAAIGLKKRELSQIPVGVYGSDCAKIKGTDCAICLGEFEVGD 120

Query: 122 KLRMLPICNHGFHLTCIDTWLLSHSSCPNCRHS-----VKPKQ------PAPPPP----- 166
           K+RMLPICNHGFH+ CIDTWLLSHSSCPNCRHS     VK K+      PAPPPP     
Sbjct: 121 KVRMLPICNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDAVTVSPAPPPPRGSAS 180

[Close]

BLAST of CmUC10G203620 vs. NCBI nr
Match: XP_023540727.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.2 bits (544), Expect = 9.1e-52
Identity = 108/154 (70.13%), Postives = 123/154 (79.87%), Query Frame = 0


Query: 2   MDQKLPRGVVETEVVQGNRTGNVS-YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCA 61
           MD  LPR ++ TE V GN T N S YVGEMN DAHMVVILAA+L ALIGA+GVNS++RC 
Sbjct: 1   MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCV 60

Query: 62  LRCGYRFGRER----AAQESAPGLKKRELTLIPIGVYGSD-ANIKSTDCGICLAQFEEGD 121
           L  G+RF  ER    AA+ +A GLKKREL+ IP+GVYGSD A IK TDC ICL +FE GD
Sbjct: 61  LSLGFRFRTERPEETAARLAAIGLKKRELSQIPVGVYGSDCAKIKGTDCAICLGEFEVGD 120

Query: 122 KLRMLPICNHGFHLTCIDTWLLSHSSCPNCRHSV 150
           K+RMLPICNHGFH+ CIDTWLLSHSSCPNCRHS+
Sbjct: 121 KVRMLPICNHGFHVRCIDTWLLSHSSCPNCRHSL 154

[Close]

BLAST of CmUC10G203620 vs. NCBI nr
Match: XP_022930638.1 (RING-H2 finger protein ATL74-like [Cucurbita moschata] >KAG6596310.1 RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027864.1 RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.1 bits (536), Expect = 7.7e-51
Identity = 117/186 (62.90%), Postives = 133/186 (71.51%), Query Frame = 0


Query: 2   MDQKLPRGVVETEVVQGNRTGNVS-YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCA 61
           MD  LPR ++ TE V GN T N S YVGEMN DAHMVVILAA+L ALIGA+GVNS++RC 
Sbjct: 1   MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCV 60

Query: 62  LRCGYRF---GRERAAQESAPGLKKRELTLIPIGVYGSD-ANIKSTDCGICLAQFEEGDK 121
           L  G+RF     E AA+ +A GLKKREL+ IP+GVYGSD A IK TDC ICL +FE GDK
Sbjct: 61  LSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVYGSDCAKIKGTDCAICLGEFEVGDK 120

Query: 122 LRMLPICNHGFHLTCIDTWLLSHSSCPNCRHS-----VKPKQ-------PAPPP-----P 166
           +RMLP CNHGFH+ CIDTWLLSHSSCPNCRHS     VK K+       P PPP      
Sbjct: 121 VRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASS 180

[Close]

BLAST of CmUC10G203620 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.9e-40
Identity = 79/139 (56.83%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 18  GNRT----GNVSYVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAA 77
           GN T    G   Y  +MNFDA+MV+ILAA+LCALI A+G+NSI+RCA+RCG+      AA
Sbjct: 12  GNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAA 71

Query: 78  QESA--PGLKKRELTLIPIGVYGS-DANIKSTDCGICLAQFEEGDKLRMLPICNHGFHLT 137
              A   GLKKREL   P+  YGS +  I +T+C ICL +F +G+++R+LP CNH FH++
Sbjct: 72  GTVADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMS 131

Query: 138 CIDTWLLSHSSCPNCRHSV 150
           CIDTWL+SHSSCPNCRHS+
Sbjct: 132 CIDTWLVSHSSCPNCRHSL 150

[Close]

BLAST of CmUC10G203620 vs. ExPASy Swiss-Prot
Match: Q9FLC6 (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-34
Identity = 71/140 (50.71%), Postives = 93/140 (66.43%), Query Frame = 0


Query: 18  GNRTGNVSYVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAAQES- 77
           G+   N   +  M  D HMV+ILAA+LCALI A+G+NS++RC LRC  RF       ++ 
Sbjct: 25  GDSVSNNKNIASM--DTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTN 84

Query: 78  ---APGLKKRELTLIPIGVYGSDANIKSTDCGICLAQFEEGDKLRMLPICNHGFHLTCID 137
              A G+KKR L +IP+  Y  +  +K+T+C ICL  F EG+ +R+LP CNHGFH+ CID
Sbjct: 85  ANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCID 144

Query: 138 TWLLSHSSCPNCRHSVKPKQ 154
           TWLLSHSSCP CR S+   Q
Sbjct: 145 TWLLSHSSCPTCRQSLLEHQ 162

[Close]

BLAST of CmUC10G203620 vs. ExPASy Swiss-Prot
Match: Q9SG96 (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-33
Identity = 71/143 (49.65%), Postives = 96/143 (67.13%), Query Frame = 0


Query: 27  VGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAAQE----------- 86
           + +  FD +MV+ILAA+LCALI A+ +NS +RC LR   RF  +                
Sbjct: 24  INDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRL 83

Query: 87  -SAPGLKKRELTLIPIGVYGSD-ANIKSTDCGICLAQFEEGDKLRMLPICNHGFHLTCID 146
            +A GLKK+ L  IP+G+YGS   ++K+T+C ICL  FE+G+K+R+LP CNHGFH+ CID
Sbjct: 84  AAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCID 143

Query: 147 TWLLSHSSCPNCRHSVKPKQPAP 157
           TWLLS SSCP CR S+  +QP+P
Sbjct: 144 TWLLSRSSCPTCRQSLLLEQPSP 166

[Close]

BLAST of CmUC10G203620 vs. ExPASy Swiss-Prot
Match: Q6NQG7 (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.3e-28
Identity = 57/129 (44.19%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 26  YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAAQE-----SAPGL 85
           YVG+ NFDA++V++L+ +LCAL+ ++G+NSIIRCALRC      E          +  G+
Sbjct: 46  YVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGV 105

Query: 86  KKRELTLIPIGVYGSDANIK--STDCGICLAQFEEGDKLRMLPICNHGFHLTCIDTWLLS 145
           K++ L       Y ++ N+    T+C ICL++F   +++++LP C+HGFH+ CID WL S
Sbjct: 106 KRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSS 165

Query: 146 HSSCPNCRH 148
           HSSCP CRH
Sbjct: 166 HSSCPTCRH 174

[Close]

BLAST of CmUC10G203620 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.6e-22
Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 0


Query: 29  EMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRF-------GRERAAQESAPGLK 88
           E N   +++++L+ ++C +I  +G++ IIRCALR   RF               S  G+K
Sbjct: 51  ENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIK 110

Query: 89  KRELTLIPIGVYGSDANIKSTD--CGICLAQFEEGDKLRMLPICNHGFHLTCIDTWLLSH 148
           K+ L + P+  Y  + N+   D  C ICL+ F  G++LR+LP CNHGFH+ CID WL  H
Sbjct: 111 KKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQH 170

[Close]

BLAST of CmUC10G203620 vs. ExPASy TrEMBL
Match: A0A1S3B8C4 (RING-H2 finger protein ATL74-like OS=Cucumis melo OX=3656 GN=LOC103487125 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.8e-58
Identity = 122/170 (71.76%), Postives = 134/170 (78.82%), Query Frame = 0


Query: 2   MDQKLPRGVVETEVVQGNRTGNVS-YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCA 61
           MDQKL RG+ E    QGNRT N S YVGE+NFD HM + LAA+LC LIGAVGVNSI+RC 
Sbjct: 1   MDQKLRRGLTE---AQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCF 60

Query: 62  LRCGYRFGRERAAQE-SAPGLKKRELTLIPIGVYGSDANIKSTDCGICLAQFEEGDKLRM 121
           LRC Y F  ERA ++ SA GLKK+EL LIPIGVYGSDANIKSTDC ICLAQFE GDKLRM
Sbjct: 61  LRCRYSFETERAEEDASAQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRM 120

Query: 122 LPICNHGFHLTCIDTWLLSHSSCPNCRHSVKPKQPAPPPPHVVVTMPYPN 170
           LPICNHGFHLTCIDTWLLS+ SCPNCR SVKP   +   PH+VV +   N
Sbjct: 121 LPICNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTS---PHIVVIIDSVN 164

[Close]

BLAST of CmUC10G203620 vs. ExPASy TrEMBL
Match: A0A5A7TM08 (RING-H2 finger protein ATL74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005850 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.5e-57
Identity = 120/164 (73.17%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 2   MDQKLPRGVVETEVVQGNRTGNVS-YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCA 61
           MDQKL RG+ E    QGNRT N S YVGE+NFD HM + LAA+LC LIGAVGVNSI+RC 
Sbjct: 1   MDQKLRRGLTE---AQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCF 60

Query: 62  LRCGYRFGRERAAQE-SAPGLKKRELTLIPIGVYGSDANIKSTDCGICLAQFEEGDKLRM 121
           LR  Y F  ERA ++ SA GLKK+EL LIPIGVYGSDANIKSTDC ICLAQFE GDKLRM
Sbjct: 61  LRRRYSFETERAEEDASAQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRM 120

Query: 122 LPICNHGFHLTCIDTWLLSHSSCPNCRHSVKPKQPAPPPPHVVV 164
           LPICNHGFHLTCIDTWLLS+ SCPNCR SVKP   +   PH+VV
Sbjct: 121 LPICNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTS---PHIVV 158

[Close]

BLAST of CmUC10G203620 vs. ExPASy TrEMBL
Match: A0A6J1I6E6 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111470053 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.6e-54
Identity = 121/187 (64.71%), Postives = 138/187 (73.80%), Query Frame = 0


Query: 2   MDQKLPRGVVETEVVQGNRTGNVS-YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCA 61
           MD  LPR ++ TE VQGN T N S YVGEMN DAHMVVILAA+L ALIGA+GVN+++RC 
Sbjct: 1   MDPNLPRRLLATEAVQGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNALVRCV 60

Query: 62  LRCGYRFGRER----AAQESAPGLKKRELTLIPIGVYGSD-ANIKSTDCGICLAQFEEGD 121
           L  G+RF  ER    AA+ +A GLKKREL+ IP+GVYGSD A IK TDC ICL +FE GD
Sbjct: 61  LSLGFRFRTERPEETAARLAAIGLKKRELSQIPVGVYGSDCAKIKGTDCAICLGEFEVGD 120

Query: 122 KLRMLPICNHGFHLTCIDTWLLSHSSCPNCRHS-----VKPKQ------PAPPPP----- 166
           K+RMLPICNHGFH+ CIDTWLLSHSSCPNCRHS     VK K+      PAPPPP     
Sbjct: 121 KVRMLPICNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDAVTVSPAPPPPRGSAS 180

[Close]

BLAST of CmUC10G203620 vs. ExPASy TrEMBL
Match: A0A6J1EVU3 (RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111437007 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.7e-51
Identity = 117/186 (62.90%), Postives = 133/186 (71.51%), Query Frame = 0


Query: 2   MDQKLPRGVVETEVVQGNRTGNVS-YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCA 61
           MD  LPR ++ TE V GN T N S YVGEMN DAHMVVILAA+L ALIGA+GVNS++RC 
Sbjct: 1   MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCV 60

Query: 62  LRCGYRF---GRERAAQESAPGLKKRELTLIPIGVYGSD-ANIKSTDCGICLAQFEEGDK 121
           L  G+RF     E AA+ +A GLKKREL+ IP+GVYGSD A IK TDC ICL +FE GDK
Sbjct: 61  LSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVYGSDCAKIKGTDCAICLGEFEVGDK 120

Query: 122 LRMLPICNHGFHLTCIDTWLLSHSSCPNCRHS-----VKPKQ-------PAPPP-----P 166
           +RMLP CNHGFH+ CIDTWLLSHSSCPNCRHS     VK K+       P PPP      
Sbjct: 121 VRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASS 180

[Close]

BLAST of CmUC10G203620 vs. ExPASy TrEMBL
Match: A0A5N6RI02 (RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_017037 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.8e-45
Identity = 88/136 (64.71%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 18  GNRTGNVSYVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAAQE-- 77
           GNRT + SY+ E NFD +MV+ILAA+LCALI A+G+NSI+RCALRC  RF  E A Q   
Sbjct: 18  GNRTRDSSYISETNFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFALETAEQTAA 77

Query: 78  --SAPGLKKRELTLIPIGVYGSDANIKSTDCGICLAQFEEGDKLRMLPICNHGFHLTCID 137
             +A GLKKR+L  IP+ +YGS  NIK+T+C ICL +FE+G+K+R+LP CNHGFH+ CID
Sbjct: 78  RLAATGLKKRDLRQIPVAIYGSGVNIKATECPICLGEFEDGEKVRVLPKCNHGFHVRCID 137

Query: 138 TWLLSHSSCPNCRHSV 150
           TWLLSHSSCPNCRHS+
Sbjct: 138 TWLLSHSSCPNCRHSL 153

[Close]

BLAST of CmUC10G203620 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 3.5e-41
Identity = 79/139 (56.83%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 18  GNRT----GNVSYVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAA 77
           GN T    G   Y  +MNFDA+MV+ILAA+LCALI A+G+NSI+RCA+RCG+      AA
Sbjct: 12  GNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAA 71

Query: 78  QESA--PGLKKRELTLIPIGVYGS-DANIKSTDCGICLAQFEEGDKLRMLPICNHGFHLT 137
              A   GLKKREL   P+  YGS +  I +T+C ICL +F +G+++R+LP CNH FH++
Sbjct: 72  GTVADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMS 131

Query: 138 CIDTWLLSHSSCPNCRHSV 150
           CIDTWL+SHSSCPNCRHS+
Sbjct: 132 CIDTWLVSHSSCPNCRHSL 150

[Close]

BLAST of CmUC10G203620 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 147.5 bits (371), Expect = 9.8e-36
Identity = 71/140 (50.71%), Postives = 93/140 (66.43%), Query Frame = 0


Query: 18  GNRTGNVSYVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAAQES- 77
           G+   N   +  M  D HMV+ILAA+LCALI A+G+NS++RC LRC  RF       ++ 
Sbjct: 25  GDSVSNNKNIASM--DTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTN 84

Query: 78  ---APGLKKRELTLIPIGVYGSDANIKSTDCGICLAQFEEGDKLRMLPICNHGFHLTCID 137
              A G+KKR L +IP+  Y  +  +K+T+C ICL  F EG+ +R+LP CNHGFH+ CID
Sbjct: 85  ANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCID 144

Query: 138 TWLLSHSSCPNCRHSVKPKQ 154
           TWLLSHSSCP CR S+   Q
Sbjct: 145 TWLLSHSSCPTCRQSLLEHQ 162

[Close]

BLAST of CmUC10G203620 vs. TAIR 10
Match: AT3G10910.1 (RING/U-box superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34
Identity = 71/143 (49.65%), Postives = 96/143 (67.13%), Query Frame = 0


Query: 27  VGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAAQE----------- 86
           + +  FD +MV+ILAA+LCALI A+ +NS +RC LR   RF  +                
Sbjct: 24  INDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRL 83

Query: 87  -SAPGLKKRELTLIPIGVYGSD-ANIKSTDCGICLAQFEEGDKLRMLPICNHGFHLTCID 146
            +A GLKK+ L  IP+G+YGS   ++K+T+C ICL  FE+G+K+R+LP CNHGFH+ CID
Sbjct: 84  AAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCID 143

Query: 147 TWLLSHSSCPNCRHSVKPKQPAP 157
           TWLLS SSCP CR S+  +QP+P
Sbjct: 144 TWLLSRSSCPTCRQSLLLEQPSP 166

[Close]

BLAST of CmUC10G203620 vs. TAIR 10
Match: AT1G49230.1 (RING/U-box superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 5.2e-29
Identity = 57/129 (44.19%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 26  YVGEMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRFGRERAAQE-----SAPGL 85
           YVG+ NFDA++V++L+ +LCAL+ ++G+NSIIRCALRC      E          +  G+
Sbjct: 46  YVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGV 105

Query: 86  KKRELTLIPIGVYGSDANIK--STDCGICLAQFEEGDKLRMLPICNHGFHLTCIDTWLLS 145
           K++ L       Y ++ N+    T+C ICL++F   +++++LP C+HGFH+ CID WL S
Sbjct: 106 KRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSS 165

Query: 146 HSSCPNCRH 148
           HSSCP CRH
Sbjct: 166 HSSCPTCRH 174

[Close]

BLAST of CmUC10G203620 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-23
Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 0


Query: 29  EMNFDAHMVVILAAILCALIGAVGVNSIIRCALRCGYRF-------GRERAAQESAPGLK 88
           E N   +++++L+ ++C +I  +G++ IIRCALR   RF               S  G+K
Sbjct: 51  ENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIK 110

Query: 89  KRELTLIPIGVYGSDANIKSTD--CGICLAQFEEGDKLRMLPICNHGFHLTCIDTWLLSH 148
           K+ L + P+  Y  + N+   D  C ICL+ F  G++LR+LP CNHGFH+ CID WL  H
Sbjct: 111 KKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQH 170

The following BLAST results are available for this feature:

BLAST of CmUC10G203620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443568.1	3.8e-58	71.76	PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo]	[more]
KAA0044224.1	7.2e-57	73.17	RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]	[more]
XP_022971293.1	3.3e-54	64.71	RING-H2 finger protein ATL74-like [Cucurbita maxima]	[more]
XP_023540727.1	9.1e-52	70.13	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930638.1	7.7e-51	62.90	RING-H2 finger protein ATL74-like [Cucurbita moschata] >KAG6596310.1 RING-H2 fin...	[more]

BLAST of CmUC10G203620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZV8	4.9e-40	56.83	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]
Q9FLC6	1.4e-34	50.71	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1	[more]
Q9SG96	2.6e-33	49.65	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1	[more]
Q6NQG7	7.3e-28	44.19	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1	[more]
P0C034	4.6e-22	39.06	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]

BLAST of CmUC10G203620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8C4	1.8e-58	71.76	RING-H2 finger protein ATL74-like OS=Cucumis melo OX=3656 GN=LOC103487125 PE=4 S...	[more]
A0A5A7TM08	3.5e-57	73.17	RING-H2 finger protein ATL74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1I6E6	1.6e-54	64.71	RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111470053 PE...	[more]
A0A6J1EVU3	3.7e-51	62.90	RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111437007 ...	[more]
A0A5N6RI02	1.8e-45	64.71	RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_0170...	[more]

BLAST of CmUC10G203620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01880.1	3.5e-41	56.83	RING/U-box superfamily protein	[more]
AT5G05280.1	9.8e-36	50.71	RING/U-box superfamily protein	[more]
AT3G10910.1	1.8e-34	49.65	RING/U-box superfamily protein	[more]
AT1G49230.1	5.2e-29	44.19	RING/U-box superfamily protein	[more]
AT1G49220.1	3.3e-23	39.06	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 104..145 e-value: 3.8E-6 score: 36.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 103..146 e-value: 2.0E-13 score: 50.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 104..146 score: 11.66311
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 62..152 e-value: 1.9E-20 score: 74.3
None	No IPR available	PANTHER	PTHR45798:SF44	RING-H2 FINGER PROTEIN ATL74	coord: 4..151
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 4..151
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 99..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G203620.1	CmUC10G203620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane