CmUC10G202310 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCCTCCTCTACGATTTTTTCATCTTCTCTTCTTCCGGCCAGAGCTCCGATCTGTAACCATCAAGACGGCCGACTCTGTCTCTTTCAAATTGGGTCTTTCCGTGCCAATAACACCAGGGCTCGTGCCCCTTTCAGGGTTCAGGCCGCAAAGCCCCCGGCTGGAGTACGCTGTCTATCCTCTTCAAATTTGTGGACTTTGTCCCATTTCTGTTTCACCTCTTGAAAAAATCGTTTACATCTCAAAAGCTTTAAGAAATTCAGAATGATAAATTAATGTGGGCTTGGGAATTACCTCTTCATTTCTGTTTTGAAGGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAATCTGGAATTCCAGAGCCTGCATGATAGGTCTTATTGGGACTTTCATAGTGGAGCTGGTGAGGTTTTCTTTTCTTTTTAATATAAAGAAAAGTTTCTTCTTTGTACCTTCTATATCTAAGTTTATGGGTTTTATTTGTCGGGTTTTTCAGATATTGAACAAAGGAATACTTCAGGTGATTGGAGTCGATGTTGGGAAAGGCCTGGATCTTCCTCTTTGA ATGGCGTCCTCCTCTACGATTTTTTCATCTTCTCTTCTTCCGGCCAGAGCTCCGATCTGTAACCATCAAGACGGCCGACTCTGTCTCTTTCAAATTGGGTCTTTCCGTGCCAATAACACCAGGGCTCGTGCCCCTTTCAGGGTTCAGGCCGCAAAGCCCCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAATCTGGAATTCCAGAGCCTGCATGATAGGTCTTATTGGGACTTTCATAGTGGAGCTGGTGAGGTTTTCTTTTCTTTTTAATATAAAGAAAAGTTTCTTCTTTGTACCTTCTATATCTAAGTTTATGGGTTTTATTTGTCGGGTTTTTCAGATATTGAACAAAGGAATACTTCAGGTGATTGGAGTCGATGTTGGGAAAGGCCTGGATCTTCCTCTTTGA ATGGCGTCCTCCTCTACGATTTTTTCATCTTCTCTTCTTCCGGCCAGAGCTCCGATCTGTAACCATCAAGACGGCCGACTCTGTCTCTTTCAAATTGGGTCTTTCCGTGCCAATAACACCAGGGCTCGTGCCCCTTTCAGGGTTCAGGCCGCAAAGCCCCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCACTAAAACTGCTGAAATCTGGAATTCCAGAGCCTGCATGATAGGTCTTATTGGGACTTTCATAGTGGAGCTGGTGAGGTTTTCTTTTCTTTTTAATATAAAGAAAAGTTTCTTCTTTGTACCTTCTATATCTAAGTTTATGGGTTTTATTTGTCGGGTTTTTCAGATATTGAACAAAGGAATACTTCAGGTGATTGGAGTCGATGTTGGGAAAGGCCTGGATCTTCCTCTTTGA MASSSTIFSSSLLPARAPICNHQDGRLCLFQIGSFRANNTRARAPFRVQAAKPPAGVELPKVEPKFEAPFLGFTKTAEIWNSRACMIGLIGTFIVELVRFSFLFNIKKSFFFVPSISKFMGFICRVFQILNKGILQVIGVDVGKGLDLPL Homology
BLAST of CmUC10G202310 vs. NCBI nr
Match: XP_038905156.1 (light-harvesting complex-like protein OHP1, chloroplastic [Benincasa hispida]) HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48 Identity = 108/150 (72.00%), Postives = 113/150 (75.33%), Query Frame = 0
BLAST of CmUC10G202310 vs. NCBI nr
Match: XP_022934608.1 (light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita moschata] >XP_022983997.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita maxima] >KAG6580528.1 Light-harvesting complex-like protein OHP1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017279.1 Light-harvesting complex-like protein OHP1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47 Identity = 107/150 (71.33%), Postives = 113/150 (75.33%), Query Frame = 0
BLAST of CmUC10G202310 vs. NCBI nr
Match: XP_023526506.1 (light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 198.0 bits (502), Expect = 5.9e-47 Identity = 106/150 (70.67%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of CmUC10G202310 vs. NCBI nr
Match: XP_022145630.1 (light-harvesting complex-like protein OHP1, chloroplastic [Momordica charantia]) HSP 1 Score: 191.8 bits (486), Expect = 4.2e-45 Identity = 105/150 (70.00%), Postives = 110/150 (73.33%), Query Frame = 0
BLAST of CmUC10G202310 vs. NCBI nr
Match: XP_004137791.1 (light-harvesting complex-like protein OHP1, chloroplastic [Cucumis sativus] >KGN58853.1 hypothetical protein Csa_001588 [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 9.1e-40 Identity = 102/152 (67.11%), Postives = 107/152 (70.39%), Query Frame = 0
BLAST of CmUC10G202310 vs. ExPASy Swiss-Prot
Match: O81208 (Light-harvesting complex-like protein OHP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP1 PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.6e-23 Identity = 70/150 (46.67%), Postives = 83/150 (55.33%), Query Frame = 0
BLAST of CmUC10G202310 vs. ExPASy TrEMBL
Match: A0A6J1J0W8 (light-harvesting complex-like protein OHP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482448 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.7e-48 Identity = 107/150 (71.33%), Postives = 113/150 (75.33%), Query Frame = 0
BLAST of CmUC10G202310 vs. ExPASy TrEMBL
Match: A0A6J1F851 (light-harvesting complex-like protein OHP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441742 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.7e-48 Identity = 107/150 (71.33%), Postives = 113/150 (75.33%), Query Frame = 0
BLAST of CmUC10G202310 vs. ExPASy TrEMBL
Match: A0A6J1CV10 (light-harvesting complex-like protein OHP1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015030 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 2.0e-45 Identity = 105/150 (70.00%), Postives = 110/150 (73.33%), Query Frame = 0
BLAST of CmUC10G202310 vs. ExPASy TrEMBL
Match: A0A0A0LAI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734070 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 4.4e-40 Identity = 102/152 (67.11%), Postives = 107/152 (70.39%), Query Frame = 0
BLAST of CmUC10G202310 vs. ExPASy TrEMBL
Match: A0A5A7TRS8 (High-light-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001530 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 4.1e-38 Identity = 103/152 (67.76%), Postives = 105/152 (69.08%), Query Frame = 0
BLAST of CmUC10G202310 vs. TAIR 10
Match: AT5G02120.1 (one helix protein ) HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24 Identity = 70/150 (46.67%), Postives = 83/150 (55.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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