CmUC10G199620 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGACACCTCCGCTCTAAAACCAGACCCACCGCTGCCCAATCTCCGCCGCAGGAACTCCATCACGGTACCGGTCGCCGTGCCATCTAAATTAAACCTTCTCGCCGCCACGAAGTCCTCCCGTGGTGCAGCGGCATCCCCGCCGCTACCGTTAGCTTTCGAGCTCGTCCCAATAAAATCCTCCTCCTCCGCCTCCTCTCCTTCCCTTGCCTACACTTCCCTCAGAGACATTTTGCCCTCGGCCACCGCCATCAGCTCCCCCACCGCCGCCTCTGCTGCGAATTCCGGGTACGAGATCTCGATCCGAAACCGCCTTGTGAAGCAGGCGGCGTGGGCATATCTTCAGCCCATGTCCTCCTCTCCAGGCTCCTCCGGACCTCACCTCCTCCGCCGTATCTGGCTCAGATTTTCGGCTTGTCTCAGTTTTCTCAACCTGCCCATAATTTCCAGTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGGTCAATTTTGTCTAA ATGGACGACACCTCCGCTCTAAAACCAGACCCACCGCTGCCCAATCTCCGCCGCAGGAACTCCATCACGGTACCGGTCGCCGTGCCATCTAAATTAAACCTTCTCGCCGCCACGAAGTCCTCCCGTGGTGCAGCGGCATCCCCGCCGCTACCGTTAGCTTTCGAGCTCGTCCCAATAAAATCCTCCTCCTCCGCCTCCTCTCCTTCCCTTGCCTACACTTCCCTCAGAGACATTTTGCCCTCGGCCACCGCCATCAGCTCCCCCACCGCCGCCTCTGCTGCGAATTCCGGGTACGAGATCTCGATCCGAAACCGCCTTGTGAAGCAGGCGGCGTGGGCATATCTTCAGCCCATGTCCTCCTCTCCAGGCTCCTCCGGACCTCACCTCCTCCGCCGTATCTGGCTCAGATTTTCGGCTTGTCTCAGTTTTCTCAACCTGCCCATAATTTCCAGTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGGTCAATTTTGTCTAA ATGGACGACACCTCCGCTCTAAAACCAGACCCACCGCTGCCCAATCTCCGCCGCAGGAACTCCATCACGGTACCGGTCGCCGTGCCATCTAAATTAAACCTTCTCGCCGCCACGAAGTCCTCCCGTGGTGCAGCGGCATCCCCGCCGCTACCGTTAGCTTTCGAGCTCGTCCCAATAAAATCCTCCTCCTCCGCCTCCTCTCCTTCCCTTGCCTACACTTCCCTCAGAGACATTTTGCCCTCGGCCACCGCCATCAGCTCCCCCACCGCCGCCTCTGCTGCGAATTCCGGGTACGAGATCTCGATCCGAAACCGCCTTGTGAAGCAGGCGGCGTGGGCATATCTTCAGCCCATGTCCTCCTCTCCAGGCTCCTCCGGACCTCACCTCCTCCGCCGTATCTGGCTCAGATTTTCGGCTTGTCTCAGTTTTCTCAACCTGCCCATAATTTCCAGTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGGTCAATTTTGTCTAA MDDTSALKPDPPLPNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPPLPLAFELVPIKSSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGVNFV Homology
BLAST of CmUC10G199620 vs. NCBI nr
Match: XP_008442897.1 (PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo] >KAA0043832.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa] >TYK25301.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa]) HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76 Identity = 159/168 (94.64%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of CmUC10G199620 vs. NCBI nr
Match: XP_011652026.1 (uncharacterized protein LOC105434978 [Cucumis sativus] >KGN59184.1 hypothetical protein Csa_001918 [Cucumis sativus]) HSP 1 Score: 290.8 bits (743), Expect = 7.5e-75 Identity = 157/168 (93.45%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of CmUC10G199620 vs. NCBI nr
Match: XP_038904448.1 (uncharacterized protein LOC120090813 [Benincasa hispida]) HSP 1 Score: 284.3 bits (726), Expect = 7.0e-73 Identity = 155/168 (92.26%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of CmUC10G199620 vs. NCBI nr
Match: XP_023526406.1 (uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 281.6 bits (719), Expect = 4.5e-72 Identity = 153/168 (91.07%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of CmUC10G199620 vs. NCBI nr
Match: XP_022983125.1 (uncharacterized protein LOC111481768 [Cucurbita maxima]) HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71 Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of CmUC10G199620 vs. ExPASy TrEMBL
Match: A0A5A7TKK1 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004370 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 6.6e-77 Identity = 159/168 (94.64%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of CmUC10G199620 vs. ExPASy TrEMBL
Match: A0A1S3B6B1 (uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 6.6e-77 Identity = 159/168 (94.64%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of CmUC10G199620 vs. ExPASy TrEMBL
Match: A0A0A0LE45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 3.6e-75 Identity = 157/168 (93.45%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of CmUC10G199620 vs. ExPASy TrEMBL
Match: A0A6J1J4V9 (uncharacterized protein LOC111481768 OS=Cucurbita maxima OX=3661 GN=LOC111481768 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71 Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of CmUC10G199620 vs. ExPASy TrEMBL
Match: A0A6J1F639 (uncharacterized protein LOC111442465 OS=Cucurbita moschata OX=3662 GN=LOC111442465 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 5.4e-71 Identity = 151/168 (89.88%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of CmUC10G199620 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 73.2 bits (178), Expect = 2.3e-13 Identity = 63/162 (38.89%), Postives = 80/162 (49.38%), Query Frame = 0
BLAST of CmUC10G199620 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 73.2 bits (178), Expect = 2.3e-13 Identity = 63/162 (38.89%), Postives = 80/162 (49.38%), Query Frame = 0
BLAST of CmUC10G199620 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10 Identity = 55/123 (44.72%), Postives = 71/123 (57.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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