CmUC10G198070 (gene) Watermelon (USVL531) v1

Overview
NameCmUC10G198070
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionribosome production factor 1-like
LocationCmU531Chr10: 29844708 .. 29847716 (+)
RNA-Seq ExpressionCmUC10G198070
SyntenyCmUC10G198070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGAGGAGAAAAAGAACAAGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAACCTCAAGAACCAGAAGAAGCTTGAGAAACGTAGGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAAGTATCTCCTGCATCTCCAGCATCTACTCTGTTTATCTTCTATCTTTAGAGATTCTGATCGTCTTTTTCGTCCTTTTCCCCCTGTAGCTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAAGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGGTTCTTCATGTTCTTCAATCTTAGAATATGACATTTAGCTTTTGTTTATTTGTAATTCTTGTCATTTAGAGTTCACTCTTTTAATATGTCTAGTTTTTGATTCTTTGCAGCTATTTGCTGGAAATGATGCCGATGAATTTAGTTCCATCATAAAGCGCGACATTTTGCCGAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACTGTAGGATTCCTCATTATTATTAGTTATGTAGCAATTTTGTTTTTAGCAACATGCACTAAATGGAGACCGACCTAAAACATTCACATTTGATTAGAGTTGGTATGGTACCTTATATTTAGATCTTCTGCTTGTATGTGACATGCTATTTGCAGATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGGTTATACTCATATTTACATTTTCTAATGAACACGAAGAAGGAAGAGGAAATTATAAAATAAATGAGGTTATACTCATATTTATAGAATATCAATTCTTCTCTTTCTTGTAGATTATAGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGGTAAGTTGATAGTCCTTCATAAACCTTGCAGTTCCTTCTTTTTGTCTCTTGCAAACTTGTTCTCTCTTTTTCTAGTATTTTGTTTCCTTGGCTGTATAGATTATATTCATTTCTCAATATAATGCAATGTTTTGAGATTCTTTCAGATGGTCTTTTAATTATTGGCTTACCTGACGGACCTACTGCGCATTTTAAGATATCTAATGTTGTCTTACGTAAGGATATTAAGGTATGCTGTTTCAAGTCAATGAAATAGCCCATGAATTTTTGTGTTGCATAATAACTACTACTGGGTTTTTCGGAGGATAAAATTTTCCATGAGACTTTAGCCATTTTATCTTTTCTTGCTTTGTAGAATCATGGAAATCCAACCAGCCATCAGCCAGAGCTGGTATTGACCAACTTCACAACACGCCTTGGTCTTCGTGTTGGAAGGTTACATTCTGTACCTAAATTTCTTTATATGCAAACACCACCTCTTGTGAAGTCTGCGTTTCATTTTTAGGTGTTCTTGTTACTTTTTCATGTGCTTCTGTAATTATGACATCGCAAGTTTTTCTCAATCCATTGACTTTTGTGGTCTTGTTTATTTAGATTAATACAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGACGGGTTGCAACTTTTCACAACCAACGAGATTTTATATTCTTTCGGCATCATCGGTGAGATACTATATACATATATTTTTCTTTTAGTATGCACATGAGTTGGACTATGATTAATTTGTGTTTTTATCTTCTCAGATACATTTTTGAAAGCAAGGAAAATAAGAAAGAGTCAGACTCAAAAAATAAGTCCAAGGATACCAAGGGTGAGAAAGTTCTTCAGCAGAAAGTAGTTGCTCGGCTTCAGGTAGATATTAATATCTTCCCTTTCACTCCTCATAGAATGTTGCTGTTTTATGATTTCTTTTTCAACTAGGAGACTTCAATATTGTTTGCTTGTTTTTATCTTCTCTCTTTCTATAATTCAGTTTCTTTTTTCCTTTTCTAATTTTTTTTGAGGGTGATGATTAACATTAATTCTTTTTTGGGACTGGAGAAACCAGCATGGGTTGGCTTAGTGGAAATGGAAATATCTTAAAAAGGCCAGAGGGCCAAGGGGTCATGGATTCAATCCATGGTGGCCACCTACCTAGGATTTAATATCCTACGGGTTTCCTTGACACCTAAATGTTGTAGGGTTAGGCGAATTGTCCCATGAGATTAGTCGAGGTGCACGTAAGCTGGTCTGGACACTCACGGATATAAAAAAAAAAAAGTTTTTGGGACTGGAGAAATTTAGAAATGTTGAGCGGGTTTTCTGAGAAGTATAGTATGAAAGCCAAAATTTTCTTATTGTAACATACTCCTTTTGTTTTCAGTCATTAAGCCTCGCACATCAACAACATTATTTTCTATTGGCTTTTGTTTTTTAAATCAATTTGGAAACTAACTGATGAGTGTGTGGGAGTAAAATTGACTTGTGTGAGGACCTAAGTTTATGATTACATTAACCTTGTGCAATATCACTTATTGACATTTTTAGATAGTAATGTTTCTTCCCTTGTACTTAATCTCTCTTCTCTGTCAACAAAATAAACAAGTTGCAAGCACACCATCACTTAGTGTGTCCAAAACTTCCTCGTTATTCTTTGTGTCAATTTTGTTTTTGTTTTTGTTTTTTGTGTTCAGATTTGAATGAGAGTGATATCAGGAGAGTAAAATATGAGAAATAATTAGAGAAAAAACAAACTAAATAATGAGAGGGAGGAATAATAGCAACTGATTCTGAGATTTGATTTTTAGGAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAGCATGGAACTTTCGATTCAAAAGGCGGAGAATATGAATGGGTTCATAAGGTAAGTCTAAGTCTCTTGATCAGAAATGCATGAAACTCAAATGATATTAGATCATCCATCTTGTTTATCTAATGTGTTTTTCCCGTCTTTTCTTTGAATTCCAGCCTGAAATGGATACCAGCCGCAGAAGATTTTTCTTGTAA

mRNA sequence

ATGGGGGAGGAGAAAAAGAACAAGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAACCTCAAGAACCAGAAGAAGCTTGAGAAACGTAGGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAAGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCCGATGAATTTAGTTCCATCATAAAGCGCGACATTTTGCCGAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACTATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGTCTTTTAATTATTGGCTTACCTGACGGACCTACTGCGCATTTTAAGATATCTAATGTTGTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGCCATCAGCCAGAGCTGGTATTGACCAACTTCACAACACGCCTTGGTCTTCGTGTTGGAAGATTAATACAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGACGGGTTGCAACTTTTCACAACCAACGAGATTTTATATTCTTTCGGCATCATCGATACATTTTTGAAAGCAAGGAAAATAAGAAAGAGTCAGACTCAAAAAATAAGTCCAAGGATACCAAGGGTGAGAAAGTTCTTCAGCAGAAAGTAGTTGCTCGGCTTCAGGAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAGCATGGAACTTTCGATTCAAAAGGCGGAGAATATGAATGGGTTCATAAGCCTGAAATGGATACCAGCCGCAGAAGATTTTTCTTGTAA

Coding sequence (CDS)

ATGGGGGAGGAGAAAAAGAACAAGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAACCTCAAGAACCAGAAGAAGCTTGAGAAACGTAGGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAAGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCCGATGAATTTAGTTCCATCATAAAGCGCGACATTTTGCCGAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACTATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGTCTTTTAATTATTGGCTTACCTGACGGACCTACTGCGCATTTTAAGATATCTAATGTTGTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGCCATCAGCCAGAGCTGGTATTGACCAACTTCACAACACGCCTTGGTCTTCGTGTTGGAAGATTAATACAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGACGGGTTGCAACTTTTCACAACCAACGAGATTTTATATTCTTTCGGCATCATCGATACATTTTTGAAAGCAAGGAAAATAAGAAAGAGTCAGACTCAAAAAATAAGTCCAAGGATACCAAGGGTGAGAAAGTTCTTCAGCAGAAAGTAGTTGCTCGGCTTCAGGAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAGCATGGAACTTTCGATTCAAAAGGCGGAGAATATGAATGGGTTCATAAGCCTGAAATGGATACCAGCCGCAGAAGATTTTTCTTGTAA

Protein sequence

MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTAHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Homology
[Close]
BLAST of CmUC10G198070 vs. NCBI nr
Match: XP_008443155.1 (PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >XP_008443156.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >XP_016899701.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >KAA0053947.1 ribosome production factor 1 isoform X1 [Cucumis melo var. makuwa] >TYK25457.1 ribosome production factor 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 641.0 bits (1652), Expect = 5.8e-180
Identity = 323/332 (97.29%), Postives = 328/332 (98.80%), Query Frame = 0 

Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPR 60
           MGEEKKNKGIIPSMIKNKEKRAEVHANLK+QKKLEKR+RAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVAT 240
           HFKISNVVLRKDIKNHGNPT HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV T
Sbjct: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]
BLAST of CmUC10G198070 vs. NCBI nr
Match: XP_038906205.1 (ribosome production factor 1 [Benincasa hispida])

HSP 1 Score: 635.6 bits (1638), Expect = 2.4e-178
Identity = 318/332 (95.78%), Postives = 327/332 (98.49%), Query Frame = 0 

Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPR 60
           MGEE KN+GIIPSMIKNKEKRAEVHANLKNQKKLEKR+RAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEENKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR+ILPKVLITTCRFNSTIGP F
Sbjct: 61  KIPRTIENTREVDETLCKPDDEELFAGNDADEFSSIIKREILPKVLITTCRFNSTIGPTF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVAT 240
           HFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRV T
Sbjct: 181 HFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRIGRLIQALFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]
BLAST of CmUC10G198070 vs. NCBI nr
Match: XP_031737500.1 (ribosome production factor 1 [Cucumis sativus] >KGN59366.1 hypothetical protein Csa_002461 [Cucumis sativus])

HSP 1 Score: 629.8 bits (1623), Expect = 1.3e-176
Identity = 316/332 (95.18%), Postives = 325/332 (97.89%), Query Frame = 0 

Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPR 60
           MGEEKKNK I+PS IKNKEKRAEVHANLK+QKKLEKR+RAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPK+LITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVAT 240
           HFKISNVVLRK+IKNHGNPT HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV T
Sbjct: 181 HFKISNVVLRKEIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKE+DSK KSK TKGEKV QQKV+ARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]
BLAST of CmUC10G198070 vs. NCBI nr
Match: XP_022156150.1 (ribosome production factor 1-like [Momordica charantia] >XP_022156151.1 ribosome production factor 1-like [Momordica charantia])

HSP 1 Score: 613.6 bits (1581), Expect = 1.0e-171
Identity = 311/333 (93.39%), Postives = 321/333 (96.40%), Query Frame = 0 

Query: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKR+RAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNSTIGP+
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSTIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVA 240
           AHFKISNVVLRKDIKNHGNPTSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV 
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK 300
           TFHNQRDFIFFRHHRYIF+SKENKKE+DSK+ SKD KGEKV +QKV+ARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]
BLAST of CmUC10G198070 vs. NCBI nr
Match: XP_022155906.1 (ribosome production factor 1-like [Momordica charantia])

HSP 1 Score: 613.2 bits (1580), Expect = 1.3e-171
Identity = 310/333 (93.09%), Postives = 321/333 (96.40%), Query Frame = 0 

Query: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKR+RAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNS+IGP+
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVA 240
           AHFKISNVVLRKDIKNHGNPTSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV 
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKE+DSK+ SKD KGEKV QQKV+ARLQECGPRFTMK
Sbjct: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]
BLAST of CmUC10G198070 vs. ExPASy Swiss-Prot
Match: Q5R631 (Ribosome production factor 1 OS=Pongo abelii OX=9601 GN=RPF1 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.9e-73
Identity = 155/326 (47.55%), Postives = 203/326 (62.27%), Query Frame = 0 

Query: 9   GIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPRKIPRTIEN 68
           G   S IKNKE+R   H      K+ +++ +  A+   +K+   LG++ PP+ +P+TI+N
Sbjct: 51  GFSISEIKNKERR---HLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDN 110

Query: 69  TREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVI 128
            R  DET   P+DEE+      DEF+S   +   PK+LITT             +L +VI
Sbjct: 111 QRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVI 170

Query: 129 PNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTAHFKISNVV 188
           PN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP+GPTAHFK+S+V 
Sbjct: 171 PNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVR 230

Query: 189 LRKDIKNHG-NPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDF 248
           LRK+IK  G +PT H PE++L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+
Sbjct: 231 LRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDY 290

Query: 249 IFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT 308
           IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Sbjct: 291 IFFRFHRYIFRSEKK------------------------VGIQELGPRFTLKLRSLQKGT 349

Query: 309 FDSKGGEYEWVHKP-EMDTSRRRFFL 333
           FDSK GEYEWVHKP EMDTSRR+F L
Sbjct: 351 FDSKYGEYEWVHKPREMDTSRRKFHL 349

[Close]
BLAST of CmUC10G198070 vs. ExPASy Swiss-Prot
Match: Q8AVP1 (Ribosome production factor 1 OS=Xenopus laevis OX=8355 GN=rpf1 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.9e-73
Identity = 155/322 (48.14%), Postives = 203/322 (63.04%), Query Frame = 0 

Query: 13  SMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPRKIPRTIENTREV 72
           S IKNK++R  +   LK +K+ EK    K R   +K+   LG++ PP+ +P+TIEN R  
Sbjct: 49  SEIKNKQRRQFMFIKLKQEKRKEKLILRKKR---KKEREALGDKAPPKPVPKTIENQRVY 108

Query: 73  DETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAH 132
           DET   P DEE+      DEF+    +   PK+LITT          F  +L S+IPN+ 
Sbjct: 109 DETTVDPADEEVALDEATDEFAPYFNKQTTPKILITTSDRPRGRSVRFTEQLSSIIPNSD 168

Query: 133 YYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTAHFKISNVVLRKD 192
            Y R    LKKII    ++D+T L+V++  R+  +GL++  LPDGPTAHFKISNV LRK+
Sbjct: 169 VYYRRGLALKKIIPQCVSRDYTDLLVINEDRKVPNGLVLCHLPDGPTAHFKISNVRLRKE 228

Query: 193 IKNHG-NPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFR 252
           +K  G  PT H+PE++L NFTTRLG  +GR+  SL+P DP+F GR+VATFHNQRD+IFFR
Sbjct: 229 MKRKGKEPTEHKPEVILNNFTTRLGHSIGRMFASLYPHDPHFVGRQVATFHNQRDYIFFR 288

Query: 253 HHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSK 312
           +HRY+F+S++                           +QE GPRFT+KL SLQ GTFDSK
Sbjct: 289 YHRYLFKSEKK------------------------VGIQELGPRFTLKLRSLQKGTFDSK 343

Query: 313 GGEYEWVHK-PEMDTSRRRFFL 333
            GEYEWVHK  EMDTSRR+F L
Sbjct: 349 YGEYEWVHKRHEMDTSRRKFHL 343

[Close]
BLAST of CmUC10G198070 vs. ExPASy Swiss-Prot
Match: Q9H9Y2 (Ribosome production factor 1 OS=Homo sapiens OX=9606 GN=RPF1 PE=1 SV=2)

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-72
Identity = 154/326 (47.24%), Postives = 203/326 (62.27%), Query Frame = 0 

Query: 9   GIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPRKIPRTIEN 68
           G   S IKNK++R   H      K+ +++ +  A+   +K+   LG++ PP+ +P+TI+N
Sbjct: 51  GFSISEIKNKQRR---HLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDN 110

Query: 69  TREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVI 128
            R  DET   P+DEE+      DEF+S   +   PK+LITT             +L +VI
Sbjct: 111 QRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVI 170

Query: 129 PNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTAHFKISNVV 188
           PN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP+GPTAHFK+S+V 
Sbjct: 171 PNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVR 230

Query: 189 LRKDIKNHG-NPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDF 248
           LRK+IK  G +PT H PE++L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+
Sbjct: 231 LRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDY 290

Query: 249 IFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT 308
           IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Sbjct: 291 IFFRFHRYIFRSEKK------------------------VGIQELGPRFTLKLRSLQKGT 349

Query: 309 FDSKGGEYEWVHKP-EMDTSRRRFFL 333
           FDSK GEYEWVHKP EMDTSRR+F L
Sbjct: 351 FDSKYGEYEWVHKPREMDTSRRKFHL 349

[Close]
BLAST of CmUC10G198070 vs. ExPASy Swiss-Prot
Match: Q7TND5 (Ribosome production factor 1 OS=Mus musculus OX=10090 GN=Rpf1 PE=2 SV=2)

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-72
Identity = 154/326 (47.24%), Postives = 204/326 (62.58%), Query Frame = 0 

Query: 9   GIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPRKIPRTIEN 68
           G   S IKNK++R   H      K+ +++ +  A+   +K+   LG++ PP+ +P+TI+N
Sbjct: 51  GFSISEIKNKQRR---HLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDN 110

Query: 69  TREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVI 128
            R  DET   P+DEE+      DEF+S   R   PK+LITT             +L +VI
Sbjct: 111 QRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVI 170

Query: 129 PNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTAHFKISNVV 188
           P++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP+GPTAHFK+S+V 
Sbjct: 171 PDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVR 230

Query: 189 LRKDIKNHG-NPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDF 248
           LRK+IK  G +PT H PE++L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+
Sbjct: 231 LRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDY 290

Query: 249 IFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGT 308
           IFFR HRYIF+S++                           +QE GPRFT+KL SLQ GT
Sbjct: 291 IFFRFHRYIFKSEKK------------------------VGIQELGPRFTLKLRSLQKGT 349

Query: 309 FDSKGGEYEWVHKP-EMDTSRRRFFL 333
           FDSK GEYEWVHKP EMDTSRR+F L
Sbjct: 351 FDSKYGEYEWVHKPREMDTSRRKFHL 349

[Close]
BLAST of CmUC10G198070 vs. ExPASy Swiss-Prot
Match: Q6IQU6 (Ribosome production factor 1 OS=Danio rerio OX=7955 GN=rpf1 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.5e-72
Identity = 159/322 (49.38%), Postives = 206/322 (63.98%), Query Frame = 0 

Query: 13  SMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPRKIPRTIENTREV 72
           S IKNK++R  +   LK +K+ +KR   K +   E++AL+  ++ PP+++P+TIEN R  
Sbjct: 36  SEIKNKQRRHTMFLKLKEEKR-KKRMELKKKKKKERKALD--DKAPPKEVPKTIENQRIY 95

Query: 73  DETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAH 132
           DET   P+DEE+      DEFS+   R   PKVLITT          F  +L +VIP+A+
Sbjct: 96  DETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAY 155

Query: 133 YYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTAHFKISNVVLRKD 192
            Y R    LKK+I    ++ FT LMV++  R+  +G+++  LPDGPTAHFK+S+V LRK+
Sbjct: 156 VYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKE 215

Query: 193 IKNHG-NPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFR 252
           +K  G NPT H PE++L NFTTRLG  +GRL  +LFP DP F GR+VATFHNQRDFIFFR
Sbjct: 216 MKRRGKNPTEHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFR 275

Query: 253 HHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSK 312
            HRYIF           KN+ K               +QE GPRFT+KL SLQ GTFDSK
Sbjct: 276 FHRYIF-----------KNEKK-------------VGIQELGPRFTLKLRSLQKGTFDSK 330

Query: 313 GGEYEWVHK-PEMDTSRRRFFL 333
            GEYEWVHK  EMD+SRR+F L
Sbjct: 336 FGEYEWVHKRHEMDSSRRKFHL 330

[Close]
BLAST of CmUC10G198070 vs. ExPASy TrEMBL
Match: A0A1S3B854 (ribosome production factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486828 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 2.8e-180
Identity = 323/332 (97.29%), Postives = 328/332 (98.80%), Query Frame = 0 

Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPR 60
           MGEEKKNKGIIPSMIKNKEKRAEVHANLK+QKKLEKR+RAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVAT 240
           HFKISNVVLRKDIKNHGNPT HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV T
Sbjct: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]
BLAST of CmUC10G198070 vs. ExPASy TrEMBL
Match: A0A5A7UHC7 (Ribosome production factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006030 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 2.8e-180
Identity = 323/332 (97.29%), Postives = 328/332 (98.80%), Query Frame = 0 

Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPR 60
           MGEEKKNKGIIPSMIKNKEKRAEVHANLK+QKKLEKR+RAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVAT 240
           HFKISNVVLRKDIKNHGNPT HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV T
Sbjct: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKE+DSK KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]
BLAST of CmUC10G198070 vs. ExPASy TrEMBL
Match: A0A0A0LH42 (Brix domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G814330 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 6.5e-177
Identity = 316/332 (95.18%), Postives = 325/332 (97.89%), Query Frame = 0 

Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPR 60
           MGEEKKNK I+PS IKNKEKRAEVHANLK+QKKLEKR+RAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPK+LITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVAT 240
           HFKISNVVLRK+IKNHGNPT HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV T
Sbjct: 181 HFKISNVVLRKEIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKE+DSK KSK TKGEKV QQKV+ARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]
BLAST of CmUC10G198070 vs. ExPASy TrEMBL
Match: A0A6J1DPH5 (ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111023106 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 4.8e-172
Identity = 311/333 (93.39%), Postives = 321/333 (96.40%), Query Frame = 0 

Query: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKR+RAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNSTIGP+
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSTIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVA 240
           AHFKISNVVLRKDIKNHGNPTSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV 
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK 300
           TFHNQRDFIFFRHHRYIF+SKENKKE+DSK+ SKD KGEKV +QKV+ARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]
BLAST of CmUC10G198070 vs. ExPASy TrEMBL
Match: A0A6J1DT48 (ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111022909 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 6.3e-172
Identity = 310/333 (93.09%), Postives = 321/333 (96.40%), Query Frame = 0 

Query: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKR+RAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNS+IGP+
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLP+GPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVA 240
           AHFKISNVVLRKDIKNHGNPTSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV 
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKE+DSK+ SKD KGEKV QQKV+ARLQECGPRFTMK
Sbjct: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]
BLAST of CmUC10G198070 vs. TAIR 10
Match: AT4G01560.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 488.0 bits (1255), Expect = 5.9e-138
Identity = 245/331 (74.02%), Postives = 285/331 (86.10%), Query Frame = 0 

Query: 2   GEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRRRAKARDAAEKQALELGEELPPRK 61
           G EK+N  I+PSMIKNK+KR++V+A  K++KKLEK+++ +ARDAAEK+ALELGEE P + 
Sbjct: 27  GGEKRNV-ILPSMIKNKDKRSKVYAKQKHEKKLEKQKKIRARDAAEKRALELGEEPPQKM 86

Query: 62  IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFI 121
           IP+TIENTRE DETVC+PDDEELFA  DADEF+ +++R+I PKVL+TTCRFNST GPA I
Sbjct: 87  IPKTIENTRESDETVCRPDDEELFADIDADEFNPVLRREIAPKVLLTTCRFNSTRGPALI 146

Query: 122 SELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPDGPTAH 181
           SELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP+GPTAH
Sbjct: 147 SELLSVIPNSHYQKRGTYDLKKIVEYATKKDFTSLIVVHTNRREPDALLIIGLPNGPTAH 206

Query: 182 FKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATF 241
           FK+SN+VLRKDIKNHGNPTSHQPELVL NFTTRLG RVGR  QSLFP DPNFRGRRV TF
Sbjct: 207 FKLSNLVLRKDIKNHGNPTSHQPELVLNNFTTRLGNRVGRFFQSLFPPDPNFRGRRVVTF 266

Query: 242 HNQRDFIFFRHHRYIFESKENKKESDSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLI 301
           HNQRDFIFFRHHRYIFE+KE          SK  KG+   ++ +  RLQECGPRFT+KL+
Sbjct: 267 HNQRDFIFFRHHRYIFETKE----------SKSDKGK---EETIKPRLQECGPRFTLKLV 326

Query: 302 SLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           +LQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Sbjct: 327 TLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 343

[Close]
BLAST of CmUC10G198070 vs. TAIR 10
Match: AT1G63780.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-36
Identity = 103/306 (33.66%), Postives = 160/306 (52.29%), Query Frame = 0 

Query: 31  QKKLE-KRRRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGND 90
           +K LE   R+   +    ++AL+ G+ +P        +  +E+D    +  +  +   + 
Sbjct: 15  RKSLEGDERKVYEQKRLIREALQEGKPIPTELRNVEAKLRQEID---LEDQNTAVPRSHI 74

Query: 91  ADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAN 150
            DE+++  + D  PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE A 
Sbjct: 75  DDEYANATEAD--PKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGSQVISEIIETAR 134

Query: 151 AKDFTSLMVVHTSRRKLDGLLIIGLPDGPTAHFKISNVVLRKDI---KNHGNPTSHQPEL 210
           + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G      P L
Sbjct: 135 SHDFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDISDKKSIGKMPEQYPHL 194

Query: 211 VLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKES 270
           +  NFTT++G RVG +++ +FP  P    +R+ TF NQ D+I FR+H Y           
Sbjct: 195 IFNNFTTQMGQRVGNILKHIFPA-PKLDAKRIVTFSNQSDYISFRNHVY----------- 254

Query: 271 DSKNKSKDTKGEKVLQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTS 330
                 K   G K ++      L+E GPRF ++L  ++ GT +    E EWV +P M+TS
Sbjct: 255 -----DKGEGGPKSIE------LKEIGPRFELRLYQVKLGTVEQNEAEIEWVIRPYMNTS 292

Query: 331 RRRFFL 333
           ++R F+
Sbjct: 315 KKRKFI 292

The following BLAST results are available for this feature:
BLAST of CmUC10G198070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443155.15.8e-18097.29PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >XP_008443156.... [more]
XP_038906205.12.4e-17895.78ribosome production factor 1 [Benincasa hispida][more]
XP_031737500.11.3e-17695.18ribosome production factor 1 [Cucumis sativus] >KGN59366.1 hypothetical protein ... [more]
XP_022156150.11.0e-17193.39ribosome production factor 1-like [Momordica charantia] >XP_022156151.1 ribosome... [more]
XP_022155906.11.3e-17193.09ribosome production factor 1-like [Momordica charantia][more]
BLAST of CmUC10G198070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5R6314.9e-7347.55Ribosome production factor 1 OS=Pongo abelii OX=9601 GN=RPF1 PE=2 SV=1[more]
Q8AVP14.9e-7348.14Ribosome production factor 1 OS=Xenopus laevis OX=8355 GN=rpf1 PE=2 SV=1[more]
Q9H9Y21.1e-7247.24Ribosome production factor 1 OS=Homo sapiens OX=9606 GN=RPF1 PE=1 SV=2[more]
Q7TND51.1e-7247.24Ribosome production factor 1 OS=Mus musculus OX=10090 GN=Rpf1 PE=2 SV=2[more]
Q6IQU62.5e-7249.38Ribosome production factor 1 OS=Danio rerio OX=7955 GN=rpf1 PE=2 SV=1[more]
BLAST of CmUC10G198070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B8542.8e-18097.29ribosome production factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486828 ... [more]
A0A5A7UHC72.8e-18097.29Ribosome production factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A0A0LH426.5e-17795.18Brix domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G814330 PE=4 S... [more]
A0A6J1DPH54.8e-17293.39ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111023106... [more]
A0A6J1DT486.3e-17293.09ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111022909... [more]
BLAST of CmUC10G198070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G01560.15.9e-13874.02Ribosomal RNA processing Brix domain protein [more]
AT1G63780.12.9e-3633.66Ribosomal RNA processing Brix domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availableGENE3D3.40.50.10480coord: 103..299
e-value: 6.7E-37
score: 128.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..57
NoneNo IPR availablePANTHERPTHR22734:SF3RIBOSOME PRODUCTION FACTOR 1coord: 1..332
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 103..306
IPR007109Brix domainSMARTSM00879Brix_2coord: 106..303
e-value: 3.7E-55
score: 199.2
IPR007109Brix domainPFAMPF04427Brixcoord: 119..301
e-value: 2.8E-32
score: 112.4
IPR007109Brix domainPROSITEPS50833BRIXcoord: 103..309
score: 41.217625
IPR044281U3 snoRNP protein/Ribosome production factor 1PANTHERPTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4coord: 1..332

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC10G198070.1CmUC10G198070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000460 maturation of 5.8S rRNA
biological_process GO:0000470 maturation of LSU-rRNA
biological_process GO:0006364 rRNA processing
cellular_component GO:0005730 nucleolus
cellular_component GO:0030687 preribosome, large subunit precursor
molecular_function GO:0042134 rRNA primary transcript binding
molecular_function GO:0019843 rRNA binding