CmUC10G197230 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G197230
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Voltage-gated potassium channel subunit beta
Location	CmU531Chr10: 28960842 .. 28961075 (+)
RNA-Seq Expression	CmUC10G197230
Synteny	CmUC10G197230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCAATCTTCGACAATGTTTTACGCCAATGGTCAGGACAAGGAGATCATGGGTCAGCCATTCAAGACCTCGGATGGAAGTGCTCCAATATAGTTGTCTCCACCAAGATCTTTTGGGGCGGTCCTGGTCAGATCGGTAAGGGGCTTTCCAGAAAGCACATTGTTGAAGGCACCGAGGCTTCACTGAAGCAATTGGACATGGAGTATGTTGATGTTATAAAAAAATTTTAA

mRNA sequence

ATGGCATCAATCTTCGACAATGTTTTACGCCAATGGTCAGGACAAGGAGATCATGGGTCAGCCATTCAAGACCTCGGATGGAAGTGCTCCAATATAGTTGTCTCCACCAAGATCTTTTGGGGCGGTCCTGGTCAGATCGGTAAGGGGCTTTCCAGAAAGCACATTGTTGAAGGCACCGAGGCTTCACTGAAGCAATTGGACATGGAGTATGTTGATGTTATAAAAAAATTTTAA

Coding sequence (CDS)

ATGGCATCAATCTTCGACAATGTTTTACGCCAATGGTCAGGACAAGGAGATCATGGGTCAGCCATTCAAGACCTCGGATGGAAGTGCTCCAATATAGTTGTCTCCACCAAGATCTTTTGGGGCGGTCCTGGTCAGATCGGTAAGGGGCTTTCCAGAAAGCACATTGTTGAAGGCACCGAGGCTTCACTGAAGCAATTGGACATGGAGTATGTTGATGTTATAAAAAAATTTTAA

Protein sequence

MASIFDNVLRQWSGQGDHGSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTEASLKQLDMEYVDVIKKF

Homology

[Close]

BLAST of CmUC10G197230 vs. NCBI nr
Match: KAD3337003.1 (hypothetical protein E3N88_32523 [Mikania micrantha] >KAD3337025.1 hypothetical protein E3N88_32545 [Mikania micrantha])

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 105

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVDVI
Sbjct: 106 ASLKRLDMEYVDVI 119

[Close]

BLAST of CmUC10G197230 vs. NCBI nr
Match: XP_038878068.1 (probable voltage-gated potassium channel subunit beta [Benincasa hispida])

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 105

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVDVI
Sbjct: 106 ASLKRLDMEYVDVI 119

[Close]

BLAST of CmUC10G197230 vs. NCBI nr
Match: OWM86474.1 (hypothetical protein CDL15_Pgr026366 [Punica granatum])

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 113 NFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 172

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVDVI
Sbjct: 173 ASLKRLDMEYVDVI 186

[Close]

BLAST of CmUC10G197230 vs. NCBI nr
Match: XP_004134014.1 (probable voltage-gated potassium channel subunit beta [Cucumis sativus] >KGN56765.1 hypothetical protein Csa_010532 [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 105

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVDVI
Sbjct: 106 ASLKRLDMEYVDVI 119

[Close]

BLAST of CmUC10G197230 vs. NCBI nr
Match: XP_024194075.1 (probable voltage-gated potassium channel subunit beta [Rosa chinensis] >PRQ36935.1 putative NADP-dependent oxidoreductase domain-containing protein [Rosa chinensis])

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     SG+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 51  NFFDNAEVYASGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 110

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVD+I
Sbjct: 111 ASLKRLDMEYVDLI 124

[Close]

BLAST of CmUC10G197230 vs. ExPASy Swiss-Prot
Match: O23016 (Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana OX=3702 GN=KAB1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.6e-20
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGW+ S+IV+STKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAIRELGWRRSDIVISTKIFWGGPGPNDKGLSRKHIVEGTK 105

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDM+YVDV+
Sbjct: 106 ASLKRLDMDYVDVL 119

[Close]

BLAST of CmUC10G197230 vs. ExPASy Swiss-Prot
Match: Q40648 (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica OX=39947 GN=KOB1 PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-18
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G A++DLGW+ S++VVSTK+FWGG G   KGLSRKHIVEG  
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLR 105

Query: 63  ASLKQLDMEYVDVI 75
            SLK+LDM+YVDV+
Sbjct: 106 GSLKRLDMDYVDVV 119

[Close]

BLAST of CmUC10G197230 vs. ExPASy Swiss-Prot
Match: Q27955 (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus OX=9913 GN=KCNAB2 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.7e-13
Identity = 31/56 (55.36%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 19  GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTEASLKQLDMEYVDVI 75
           G+ I+  GW+ S++V++TKIFWGG  +  +GLSRKHI+EG +ASL++L +EYVDV+
Sbjct: 100 GNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 155

[Close]

BLAST of CmUC10G197230 vs. ExPASy Swiss-Prot
Match: Q13303 (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens OX=9606 GN=KCNAB2 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 1.7e-13
Identity = 31/56 (55.36%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 19  GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTEASLKQLDMEYVDVI 75
           G+ I+  GW+ S++V++TKIFWGG  +  +GLSRKHI+EG +ASL++L +EYVDV+
Sbjct: 100 GNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 155

[Close]

BLAST of CmUC10G197230 vs. ExPASy Swiss-Prot
Match: P62482 (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus OX=10090 GN=Kcnab2 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.7e-13
Identity = 31/56 (55.36%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 19  GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTEASLKQLDMEYVDVI 75
           G+ I+  GW+ S++V++TKIFWGG  +  +GLSRKHI+EG +ASL++L +EYVDV+
Sbjct: 100 GNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 155

[Close]

BLAST of CmUC10G197230 vs. ExPASy TrEMBL
Match: A0A2I0J6N1 (probable voltage-gated potassium channel subunit beta OS=Punica granatum OX=22663 GN=LOC116196930 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 105

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVDVI
Sbjct: 106 ASLKRLDMEYVDVI 119

[Close]

BLAST of CmUC10G197230 vs. ExPASy TrEMBL
Match: A0A5N6M8P7 (Aldo_ket_red domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_32523 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 105

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVDVI
Sbjct: 106 ASLKRLDMEYVDVI 119

[Close]

BLAST of CmUC10G197230 vs. ExPASy TrEMBL
Match: A0A5A7TZY1 (Putative voltage-gated potassium channel subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002470 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 105

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVDVI
Sbjct: 106 ASLKRLDMEYVDVI 119

[Close]

BLAST of CmUC10G197230 vs. ExPASy TrEMBL
Match: A0A2P6QRW6 (Putative NADP-dependent oxidoreductase domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0396981 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     SG+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 51  NFFDNAEVYASGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 110

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVD+I
Sbjct: 111 ASLKRLDMEYVDLI 124

[Close]

BLAST of CmUC10G197230 vs. ExPASy TrEMBL
Match: A0A0A0L457 (Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G133160 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGWK S+IVVSTKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTK 105

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDMEYVDVI
Sbjct: 106 ASLKRLDMEYVDVI 119

[Close]

BLAST of CmUC10G197230 vs. TAIR 10
Match: AT1G04690.1 (potassium channel beta subunit 1 )

HSP 1 Score: 97.8 bits (242), Expect = 4.0e-21
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 3   SIFDNVLRQWSGQGDH--GSAIQDLGWKCSNIVVSTKIFWGGPGQIGKGLSRKHIVEGTE 62
           + FDN     +G+ +   G AI++LGW+ S+IV+STKIFWGGPG   KGLSRKHIVEGT+
Sbjct: 46  NFFDNAEVYANGRAEEIMGQAIRELGWRRSDIVISTKIFWGGPGPNDKGLSRKHIVEGTK 105

Query: 63  ASLKQLDMEYVDVI 75
           ASLK+LDM+YVDV+
Sbjct: 106 ASLKRLDMDYVDVL 119

The following BLAST results are available for this feature:

BLAST of CmUC10G197230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAD3337003.1	3.9e-18	67.57	hypothetical protein E3N88_32523 [Mikania micrantha] >KAD3337025.1 hypothetical ...	[more]
XP_038878068.1	3.9e-18	67.57	probable voltage-gated potassium channel subunit beta [Benincasa hispida]	[more]
OWM86474.1	3.9e-18	67.57	hypothetical protein CDL15_Pgr026366 [Punica granatum]	[more]
XP_004134014.1	3.9e-18	67.57	probable voltage-gated potassium channel subunit beta [Cucumis sativus] >KGN5676...	[more]
XP_024194075.1	3.9e-18	67.57	probable voltage-gated potassium channel subunit beta [Rosa chinensis] >PRQ36935...	[more]

BLAST of CmUC10G197230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23016	5.6e-20	62.16	Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana OX...	[more]
Q40648	8.9e-18	56.76	Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. jap...	[more]
Q27955	1.7e-13	55.36	Voltage-gated potassium channel subunit beta-2 OS=Bos taurus OX=9913 GN=KCNAB2 P...	[more]
Q13303	1.7e-13	55.36	Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens OX=9606 GN=KCNAB2...	[more]
P62482	1.7e-13	55.36	Voltage-gated potassium channel subunit beta-2 OS=Mus musculus OX=10090 GN=Kcnab...	[more]

BLAST of CmUC10G197230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I0J6N1	1.9e-18	67.57	probable voltage-gated potassium channel subunit beta OS=Punica granatum OX=2266...	[more]
A0A5N6M8P7	1.9e-18	67.57	Aldo_ket_red domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_3...	[more]
A0A5A7TZY1	1.9e-18	67.57	Putative voltage-gated potassium channel subunit beta OS=Cucumis melo var. makuw...	[more]
A0A2P6QRW6	1.9e-18	67.57	Putative NADP-dependent oxidoreductase domain-containing protein OS=Rosa chinens...	[more]
A0A0A0L457	1.9e-18	67.57	Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G13316...	[more]

BLAST of CmUC10G197230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04690.1	4.0e-21	62.16	potassium channel beta subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036812	NADP-dependent oxidoreductase domain superfamily	GENE3D	3.20.20.100		coord: 13..74 e-value: 1.2E-10 score: 43.0
IPR036812	NADP-dependent oxidoreductase domain superfamily	SUPERFAMILY	51430	NAD(P)-linked oxidoreductase	coord: 19..73
IPR023210	NADP-dependent oxidoreductase domain	PFAM	PF00248	Aldo_ket_red	coord: 19..73 e-value: 8.6E-8 score: 31.7
None	No IPR available	PANTHER	PTHR43150	HYPERKINETIC, ISOFORM M	coord: 18..74
None	No IPR available	PANTHER	PTHR43150:SF10	POTASSIUM CHANNEL BETA SUBUNIT 1-RELATED	coord: 18..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G197230.1	CmUC10G197230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006813	potassium ion transport
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0034765	regulation of ion transmembrane transport
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0047834	D-threo-aldose 1-dehydrogenase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0005244	voltage-gated ion channel activity