CmUC10G191420 (gene) Watermelon (USVL531) v1

Overview
NameCmUC10G191420
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr10: 21018129 .. 21018410 (-)
RNA-Seq ExpressionCmUC10G191420
SyntenyCmUC10G191420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACACCGGATAACTTCTCTCTCCTAGGGCACCGCGAGCGACGTGTCGGCGATCTATTCGACAAAACAACTTCCAAACGTCCTTTTGCTATTTCCACTTCTCCTGGATTTGGTGCGTACGAGGAAAGCTCTAGTCCACGCGAGGTAAAGCGCGTGAACTCAACGAGCTCTGTCGTGTCGACACGTACGGTAAATCACGGAGTCCGGATTCTCTGTCGGAGGACAAGGAGTCTCGGATTGATTTACCGTAACGACATGTCGGCTGGAGAGAGCGAGTAG

mRNA sequence

ATGGCAACACCGGATAACTTCTCTCTCCTAGGGCACCGCGAGCGACGTGTCGGCGATCTATTCGACAAAACAACTTCCAAACGTCCTTTTGCTATTTCCACTTCTCCTGGATTTGGTGCGTACGAGGAAAGCTCTAGTCCACGCGAGGTAAAGCGCGTGAACTCAACGAGCTCTGTCGTGTCGACACGTACGGTAAATCACGGAGTCCGGATTCTCTGTCGGAGGACAAGGAGTCTCGGATTGATTTACCGTAACGACATGTCGGCTGGAGAGAGCGAGTAG

Coding sequence (CDS)

ATGGCAACACCGGATAACTTCTCTCTCCTAGGGCACCGCGAGCGACGTGTCGGCGATCTATTCGACAAAACAACTTCCAAACGTCCTTTTGCTATTTCCACTTCTCCTGGATTTGGTGCGTACGAGGAAAGCTCTAGTCCACGCGAGGTAAAGCGCGTGAACTCAACGAGCTCTGTCGTGTCGACACGTACGGTAAATCACGGAGTCCGGATTCTCTGTCGGAGGACAAGGAGTCTCGGATTGATTTACCGTAACGACATGTCGGCTGGAGAGAGCGAGTAG

Protein sequence

MATPDNFSLLGHRERRVGDLFDKTTSKRPFAISTSPGFGAYEESSSPREVKRVNSTSSVVSTRTVNHGVRILCRRTRSLGLIYRNDMSAGESE
Homology
BLAST of CmUC10G191420 vs. NCBI nr
Match: TYK29421.1 (hypothetical protein E5676_scaffold655G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16
Identity = 48/57 (84.21%), Postives = 50/57 (87.72%), Query Frame = 0

Query: 1  MATPDNFSLLGHRERRVGDLFDKTTSKRPFAISTSPGFGAYEESSSPREVKRVNSTS 58
          MAT D FS LGHRE+RVGDLFDKTTSKR F ISTS GFGAYEES SPRE+KRVNSTS
Sbjct: 37 MATGDKFSFLGHREQRVGDLFDKTTSKRLFVISTSSGFGAYEESFSPREMKRVNSTS 93

BLAST of CmUC10G191420 vs. NCBI nr
Match: KAG6600251.1 (hypothetical protein SDJN03_05484, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13
Identity = 48/82 (58.54%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 1   MATPDNFSLLGHRERRVGDLFDKTTSKRPFAISTSPGFGAYEESSSPREVKRVNSTSSVV 60
           M T + F LL  RE RVGDLFDKTTS R    ST PGFG YEESS+P E +RV ST  VV
Sbjct: 25  METANKFPLLWRRELRVGDLFDKTTSMRLSTSSTPPGFGEYEESSAPLEKERVESTRDVV 84

Query: 61  STRTVNHGVRILCRRTRSLGLI 83
             RT NH + I CRR     LI
Sbjct: 85  LKRTTNHRLGIPCRRPTDSDLI 106

BLAST of CmUC10G191420 vs. ExPASy TrEMBL
Match: A0A0A0KWH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G181210 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26
Identity = 66/93 (70.97%), Postives = 74/93 (79.57%), Query Frame = 0

Query: 1  MATPDNFSLLGHRERRVGDLFDKTTSKRPFAISTSPGFGAYEESSSPREVKRVNSTSSVV 60
          MAT D FS LGHRERRVGDLFDKTTS+  F IST  GFGAYEE+S+PR +KRVNSTSS +
Sbjct: 1  MATADKFSFLGHRERRVGDLFDKTTSEPLFVISTPSGFGAYEETSTPRLIKRVNSTSSQL 60

Query: 61 STRTVNHGVRILCRRTRSLGLIYRNDMSAGESE 94
           TR VN G+ ILCR   SL LIY +DMS+GESE
Sbjct: 61 LTRMVNRGLGILCRTLTSLRLIYHSDMSSGESE 93

BLAST of CmUC10G191420 vs. ExPASy TrEMBL
Match: A0A5D3E1F8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00120 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.2e-17
Identity = 48/57 (84.21%), Postives = 50/57 (87.72%), Query Frame = 0

Query: 1  MATPDNFSLLGHRERRVGDLFDKTTSKRPFAISTSPGFGAYEESSSPREVKRVNSTS 58
          MAT D FS LGHRE+RVGDLFDKTTSKR F ISTS GFGAYEES SPRE+KRVNSTS
Sbjct: 37 MATGDKFSFLGHREQRVGDLFDKTTSKRLFVISTSSGFGAYEESFSPREMKRVNSTS 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK29421.11.5e-1684.21hypothetical protein E5676_scaffold655G00120 [Cucumis melo var. makuwa][more]
KAG6600251.11.5e-1358.54hypothetical protein SDJN03_05484, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KWH41.3e-2670.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G181210 PE=4 SV=1[more]
A0A5D3E1F87.2e-1784.21Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC10G191420.1CmUC10G191420.1mRNA