CmUC10G190270 (gene) Watermelon (USVL531) v1

Overview
NameCmUC10G190270
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionClassical arabinogalactan protein 9
LocationCmU531Chr10: 17464646 .. 17465164 (-)
RNA-Seq ExpressionCmUC10G190270
SyntenyCmUC10G190270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATGGGTTTCCAATTTGTGTTGGTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAGGCTCCCGGTAGCGCTCCGGCTCAGCCGCCCACCACCCCCGCCGTCCCTCCGCCATCTACTCCTCCCCCAGCCGCCTCCCCACCTCCAGCCACCCCTCCTCCTGCAACCCCACCACCGGCCACCCCTCCAGTCGCAACCCCACCACCGGCCACCCCTCCAGTCGCCACCCCACCACCAGCTTCAACCCCACCATCATCACCGCCAGCTTCAGCTCCCACATCTCCCGCCCCAGCATCACCTACATCGTCTCCGAGCGCGCCACCAAAGGAGGGTCCGACCTCATCTCCAACTTCATCACCGCCATCACCACCACCGGAAGGAAATGTCCCTACGGGAAGCCCAGGACCGAGCCCGCCACCACCCCCACCCGAAGGAAATGGCGCAGCCAGCGTTAGCCGGGGAATGATGGTGGGTGGCGCAGTGGCCGGAGCTTTGTTGGCAATGGTATTTGCTTAG

mRNA sequence

ATGAAAATGGGTTTCCAATTTGTGTTGGTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAGGCTCCCGGTAGCGCTCCGGCTCAGCCGCCCACCACCCCCGCCGTCCCTCCGCCATCTACTCCTCCCCCAGCCGCCTCCCCACCTCCAGCCACCCCTCCTCCTGCAACCCCACCACCGGCCACCCCTCCAGTCGCAACCCCACCACCGGCCACCCCTCCAGTCGCCACCCCACCACCAGCTTCAACCCCACCATCATCACCGCCAGCTTCAGCTCCCACATCTCCCGCCCCAGCATCACCTACATCGTCTCCGAGCGCGCCACCAAAGGAGGGTCCGACCTCATCTCCAACTTCATCACCGCCATCACCACCACCGGAAGGAAATGTCCCTACGGGAAGCCCAGGACCGAGCCCGCCACCACCCCCACCCGAAGGAAATGGCGCAGCCAGCGTTAGCCGGGGAATGATGGTGGGTGGCGCAGTGGCCGGAGCTTTGTTGGCAATGGTATTTGCTTAG

Coding sequence (CDS)

ATGAAAATGGGTTTCCAATTTGTGTTGGTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAGGCTCCCGGTAGCGCTCCGGCTCAGCCGCCCACCACCCCCGCCGTCCCTCCGCCATCTACTCCTCCCCCAGCCGCCTCCCCACCTCCAGCCACCCCTCCTCCTGCAACCCCACCACCGGCCACCCCTCCAGTCGCAACCCCACCACCGGCCACCCCTCCAGTCGCCACCCCACCACCAGCTTCAACCCCACCATCATCACCGCCAGCTTCAGCTCCCACATCTCCCGCCCCAGCATCACCTACATCGTCTCCGAGCGCGCCACCAAAGGAGGGTCCGACCTCATCTCCAACTTCATCACCGCCATCACCACCACCGGAAGGAAATGTCCCTACGGGAAGCCCAGGACCGAGCCCGCCACCACCCCCACCCGAAGGAAATGGCGCAGCCAGCGTTAGCCGGGGAATGATGGTGGGTGGCGCAGTGGCCGGAGCTTTGTTGGCAATGGTATTTGCTTAG

Protein sequence

MKMGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPTSSPPSPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA
Homology
BLAST of CmUC10G190270 vs. NCBI nr
Match: KAA0053440.1 (classical arabinogalactan protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 2.0e-51
Identity = 147/172 (85.47%), Postives = 156/172 (90.70%), Query Frame = 0

Query: 1   MKMGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPP 60
           MKMGFQFV+ LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPP
Sbjct: 1   MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP 60

Query: 61  ATPPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPTSS 120
           ATPP ATPPPA    +TPP  S+PPS PPAS PTSP P+SP+S P+APPKEGP S PTSS
Sbjct: 61  ATPPPATPPPA----STPP--SSPPSQPPASPPTSPPPSSPSSPPTAPPKEGPISPPTSS 120

Query: 121 PPSPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
           PPSPPPEGNVPT SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGA LAM+FA
Sbjct: 121 PPSPPPEGNVPTNSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA 166

BLAST of CmUC10G190270 vs. NCBI nr
Match: TYK14854.1 (vegetative cell wall protein gp1 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 2.0e-51
Identity = 147/172 (85.47%), Postives = 156/172 (90.70%), Query Frame = 0

Query: 1   MKMGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPP 60
           MKMGFQFV+ LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPP
Sbjct: 1   MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP 60

Query: 61  ATPPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPTSS 120
           ATPP ATPPPA    +TPP  S+PPS PPAS PTSP P+SP+S P+APPKEGP S PTSS
Sbjct: 61  ATPPPATPPPA----STPP--SSPPSQPPASPPTSPPPSSPSSPPTAPPKEGPISPPTSS 120

Query: 121 PPSPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
           PPSPPPEGNVPT SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGA LAM+FA
Sbjct: 121 PPSPPPEGNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA 166

BLAST of CmUC10G190270 vs. NCBI nr
Match: XP_008455676.1 (PREDICTED: vegetative cell wall protein gp1 [Cucumis melo])

HSP 1 Score: 209.1 bits (531), Expect = 2.9e-50
Identity = 145/170 (85.29%), Postives = 154/170 (90.59%), Query Frame = 0

Query: 3   MGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPAT 62
           MGFQFV+ LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPAT
Sbjct: 1   MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPAT 60

Query: 63  PPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPTSSPP 122
           PP ATPPPA    +TPP  S+PPS PPAS PTSP P+SP+S P+APPKEGP S PTSSPP
Sbjct: 61  PPPATPPPA----STPP--SSPPSQPPASPPTSPPPSSPSSPPTAPPKEGPISPPTSSPP 120

Query: 123 SPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
           SPPPEGNVPT SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGA LAM+FA
Sbjct: 121 SPPPEGNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA 164

BLAST of CmUC10G190270 vs. NCBI nr
Match: KAG6600667.1 (hypothetical protein SDJN03_05900, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-38
Identity = 137/182 (75.27%), Postives = 148/182 (81.32%), Query Frame = 0

Query: 1   MKMGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPA-TPP 60
           MKMG QF++VLA  ATS MAQAPG+APAQPPTTPAVPPPSTPPPAASPPPATPPPA TPP
Sbjct: 1   MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPP 60

Query: 61  PATPPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSP-- 120
           PATPP ATPPPATPP ATPP A TPPS PPA+ PTSPA   PTSSP+ PPKEGP SSP  
Sbjct: 61  PATPPPATPPPATPPPATPPSA-TPPSQPPATPPTSPA---PTSSPTPPPKEGPASSPSP 120

Query: 121 -------TSSPPSPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMV 173
                  T+SPPSPP EGNVP+G+PGP+  PPPPE NGA S+SR  MVG AV+G LLAMV
Sbjct: 121 SPSPSPSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMV 177

BLAST of CmUC10G190270 vs. NCBI nr
Match: XP_023545089.1 (classical arabinogalactan protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168.3 bits (425), Expect = 5.7e-38
Identity = 134/177 (75.71%), Postives = 147/177 (83.05%), Query Frame = 0

Query: 3   MGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPP-ATPPPA 62
           MG QF+++LA  ATS MAQAPG+APAQPPTTPAVPPPSTPPPAASPPPATPPP ATPPPA
Sbjct: 1   MGIQFLMLLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPAATPPPA 60

Query: 63  TPPVATPPPATPPVATPP---PASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSP- 122
           TPP ATPPPATPP ATPP   P S+PPS PPA+ PTSPA   PTSSP+ PPKEGP SSP 
Sbjct: 61  TPPPATPPPATPPPATPPSATPPSSPPSQPPATPPTSPA---PTSSPTPPPKEGPASSPS 120

Query: 123 --TSSPPSPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
             T+SPPSPP EGNVP+G+PGP+  PPPPE NGA S+SR  MVG AV+G LLAMVFA
Sbjct: 121 PSTASPPSPPTEGNVPSGAPGPN-APPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA 173

BLAST of CmUC10G190270 vs. ExPASy TrEMBL
Match: A0A0A0L0L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G098710 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.5e-52
Identity = 148/172 (86.05%), Postives = 156/172 (90.70%), Query Frame = 0

Query: 1   MKMGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPP 60
           MKMGFQFV+ LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPP
Sbjct: 1   MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP 60

Query: 61  ATPPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPTSS 120
           ATPP ATPPPA    +TPP  S+PPS PPAS PTSP P+SP+S P+APPKEGP S PTSS
Sbjct: 61  ATPPPATPPPA----STPP--SSPPSQPPASPPTSPPPSSPSSPPTAPPKEGPISPPTSS 120

Query: 121 PPSPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
           PPSPPPEGNVPT SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGA LAMVFA
Sbjct: 121 PPSPPPEGNVPTNSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMVFA 166

BLAST of CmUC10G190270 vs. ExPASy TrEMBL
Match: A0A5D3CV77 (Vegetative cell wall protein gp1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold461G00250 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.8e-52
Identity = 147/172 (85.47%), Postives = 156/172 (90.70%), Query Frame = 0

Query: 1   MKMGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPP 60
           MKMGFQFV+ LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPP
Sbjct: 1   MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP 60

Query: 61  ATPPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPTSS 120
           ATPP ATPPPA    +TPP  S+PPS PPAS PTSP P+SP+S P+APPKEGP S PTSS
Sbjct: 61  ATPPPATPPPA----STPP--SSPPSQPPASPPTSPPPSSPSSPPTAPPKEGPISPPTSS 120

Query: 121 PPSPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
           PPSPPPEGNVPT SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGA LAM+FA
Sbjct: 121 PPSPPPEGNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA 166

BLAST of CmUC10G190270 vs. ExPASy TrEMBL
Match: A0A5A7UE17 (Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G001110 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.8e-52
Identity = 147/172 (85.47%), Postives = 156/172 (90.70%), Query Frame = 0

Query: 1   MKMGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPP 60
           MKMGFQFV+ LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPP
Sbjct: 1   MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP 60

Query: 61  ATPPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPTSS 120
           ATPP ATPPPA    +TPP  S+PPS PPAS PTSP P+SP+S P+APPKEGP S PTSS
Sbjct: 61  ATPPPATPPPA----STPP--SSPPSQPPASPPTSPPPSSPSSPPTAPPKEGPISPPTSS 120

Query: 121 PPSPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
           PPSPPPEGNVPT SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGA LAM+FA
Sbjct: 121 PPSPPPEGNVPTNSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA 166

BLAST of CmUC10G190270 vs. ExPASy TrEMBL
Match: A0A1S3C1K1 (vegetative cell wall protein gp1 OS=Cucumis melo OX=3656 GN=LOC103495791 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.4e-50
Identity = 145/170 (85.29%), Postives = 154/170 (90.59%), Query Frame = 0

Query: 3   MGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPAT 62
           MGFQFV+ LALFATSCMAQAPG+APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPAT
Sbjct: 1   MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPAT 60

Query: 63  PPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPTSSPP 122
           PP ATPPPA    +TPP  S+PPS PPAS PTSP P+SP+S P+APPKEGP S PTSSPP
Sbjct: 61  PPPATPPPA----STPP--SSPPSQPPASPPTSPPPSSPSSPPTAPPKEGPISPPTSSPP 120

Query: 123 SPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
           SPPPEGNVPT SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGA LAM+FA
Sbjct: 121 SPPPEGNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA 164

BLAST of CmUC10G190270 vs. ExPASy TrEMBL
Match: A0A6J1J5L5 (classical arabinogalactan protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111482820 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35
Identity = 128/175 (73.14%), Postives = 138/175 (78.86%), Query Frame = 0

Query: 1   MKMGFQFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPP 60
           MKMGFQFV+VLALFATS MAQAPG+APAQPPTTPAVPPPSTPPP  +       PATPPP
Sbjct: 1   MKMGFQFVMVLALFATSSMAQAPGAAPAQPPTTPAVPPPSTPPPVVA-------PATPPP 60

Query: 61  ATPPVATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPT-- 120
           A    ATPPPATPP A  PP S PPSSP    PT P PASP +SP+ PPKEGP SSPT  
Sbjct: 61  A----ATPPPATPPPAVTPPPSQPPSSP----PTQP-PASPPTSPTPPPKEGPASSPTPS 120

Query: 121 -SSPPSPPPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
            +SPPSPP EG VP+ SPGP+ PPPPP  NGAA+VSRG+MVGGAVAGALLAMVFA
Sbjct: 121 SASPPSPPSEGMVPSASPGPNSPPPPPGDNGAATVSRGVMVGGAVAGALLAMVFA 159

BLAST of CmUC10G190270 vs. TAIR 10
Match: AT5G10430.1 (arabinogalactan protein 4 )

HSP 1 Score: 42.4 bits (98), Expect = 4.4e-04
Identity = 82/168 (48.81%), Postives = 93/168 (55.36%), Query Frame = 0

Query: 6   QFVLVLALFATSCMAQAPGSAPAQPPTTPAVPPPSTPPPAASPPP-ATPPPATPPPATPP 65
           Q  L+LALFATS +AQAP       PT  A PPP+TPPP A+PPP ATPPPA    ATP 
Sbjct: 7   QVFLMLALFATSALAQAPA------PTPTATPPPATPPPVATPPPVATPPPA----ATPA 66

Query: 66  VATPPPATPPVATPPPASTPPSSPPASAPTSPAPASPTSSPSAPPKEGPTSSPTSSPPSP 125
            ATPPPA    ATP PA+TPPS  P     SPA   PT+SP AP  EGPT SP+S     
Sbjct: 67  PATPPPA----ATPAPATTPPSVAP-----SPADV-PTASPPAP--EGPTVSPSS----- 126

Query: 126 PPEGNVPTGSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGALLAMVFA 173
                    +PGPS   P P    AA  ++    G A A  + A V A
Sbjct: 127 ---------APGPSDASPAP---SAAFSNKAFFAGTAFAAIMYAAVLA 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0053440.12.0e-5185.47classical arabinogalactan protein 9 [Cucumis melo var. makuwa][more]
TYK14854.12.0e-5185.47vegetative cell wall protein gp1 [Cucumis melo var. makuwa][more]
XP_008455676.12.9e-5085.29PREDICTED: vegetative cell wall protein gp1 [Cucumis melo][more]
KAG6600667.11.2e-3875.27hypothetical protein SDJN03_05900, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023545089.15.7e-3875.71classical arabinogalactan protein 4-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L0L17.5e-5286.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G098710 PE=4 SV=1[more]
A0A5D3CV779.8e-5285.47Vegetative cell wall protein gp1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7UE179.8e-5285.47Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A1S3C1K11.4e-5085.29vegetative cell wall protein gp1 OS=Cucumis melo OX=3656 GN=LOC103495791 PE=4 SV... [more]
A0A6J1J5L51.7e-3573.14classical arabinogalactan protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
Match NameE-valueIdentityDescription
AT5G10430.14.4e-0448.81arabinogalactan protein 4 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 47..64
score: 45.56
coord: 27..43
score: 40.0
coord: 68..93
score: 36.92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..152
NoneNo IPR availablePANTHERPTHR36321:SF6CLASSICAL ARABINOGALACTAN PROTEIN 2coord: 1..72
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
IPR044959Classical arabinogalactan proteinPANTHERPTHR36321CLASSICAL ARABINOGALACTAN PROTEIN 9coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC10G190270.1CmUC10G190270.1mRNA