CmUC10G188620 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G188620
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	plant intracellular Ras-group-related LRR protein 6
Location	CmU531Chr10: 8813931 .. 8816851 (+)
RNA-Seq Expression	CmUC10G188620
Synteny	CmUC10G188620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAAAGTCGACAGGGGCGGCGAAAGTTGCGTCCAGATACAACAGCGGCGGCAACACTTAAAAAATAGGGTTAGGGTGTTTTTATGCTCGGATACCATGTGGCAAAGGTAGAATATTTTATTTAGTATTACTATCTTTTCTTAATAATACAAGGGTACAAAGCCCTAAAATCAAGTATTGGATAAATCAACCCCCCCCCCCCCCCCCTTCACCGCTTTAATTAGAGAATTGTTTAATGAAACAGAATTAGCGCCTCCTTGTGAATCGACTCGGACTTGCCACTTGTGCTACGTCATCGTAGTATAGGTAGTATTTCGGTATTATTAATTTTTTGTGATCAGCTTCCTTTGGGAATTGAATGACGGCCAAAGGGATTCTATCAATAACCAACTAAAGAAAGACCTAAGTAAGTAGATGGCCATTGTCTCTGTATGCAACCAAAATTTGACATCCCTTCCATCTCATGGTTAGCAATATGAAACTCAAGCTACTCGCTCTAGTAAAGACTAAATTTTAAACTAGAGGCTCTCTCAAATATATGAACAGTCTCAAAAAGTTGTTCCAAAGCAGTCCAAATCAGTCGTGGAAAACAAGAGCGTGTTATCAGCAAATTTAAGATGGTTCAAACATAAATAGGAAGCATTAATAGGATGGGTGGCAATACTGCCCAAACGAGCACGATGAGCCAGAAGACGATCAAGGCAATCAACAACCAAAATAAATAAGAAAGGTGAGAGAGGGTCACATGTTGCGGGGATGGATGATTTTCCCTTGTGGTCTACCATTAATAATGATAGAATAATTAGCACTAGAGCTAGTGCCCCTGATCCAAGATCGCCAAAGAAAACCAAAACCCTTAGCCTGAACAACTTCAAGAAACTCTCAATCAATAGTATCAAAAGCCTCCCTAAGATTCAATTTGAGAATCACGCCTTCTTTATGAGAGATAGTCAAATCATCAATCAGTTCATTAGCCATTAACTGAGGCATCTAGAATCTATCTATTGGTGACAAAAGCTAGTTGATTTTCAACAATGGTAGAAGGGAGAACAGACCTTAACTAATTAGACGAAATTCAACCAATGATCTTATAAGCACAAGCAATAAGACTAATTAGCGATAATGAACAACTGATTTAGAGTCAATTTTCTTTGGAATTAAACAAATGTATGTCTCATTCAGGGAAGCATTAACAGTACTGGAAGAAAAGAAATCATGGATCATAGTCATAATGTTGGGCTTAAGAGTAAGTAAAAAGATTTGAAGAATTCAGCAGCAAAACCATAAGGACCAGGAGACTTGTTTGACCCCAAAAAGGAAATTGCATGAAAAACCTCTGCTTCAGTAAAAGGAACTTCAATCCCAATTGTCTGTTCACAGCTCCAGTCAAGATTCAAAACATCCTTTGTAAACAATTCGTACAAAAATCAGTAAATTCAGTCTCAAGATCACTGGCTGACTAGAGGCTCTGGAAAGGATTTCAGTAATTGAGCTTCTATGCTTGGCAGCTAGAATTCGATGAAAAAAACTTGTTTTCATCACCCTTCTTAAGCCAATTTAATTTATAGCGTTGATGCCAATAAATATGCTCTTGAGCCGTCAACAATTTAATCTATTCTCTGAGCAACTGCGGATGTTTTCATCGCCCTCCTTAAACCTACTATTACTCATTTATTAAGAAACATAAGTTTTGTTAACCATCCCGTTACTTGTTTTAAATATATATATATATATATATATATTTTTGGAGTATTCCTAAAATAGTGTTTCAGAAAATATATAAAAAAAAATAGTTTCTCTCTATTCTATTTCTGCTTTAAGGAGCTTTCTCTAGAAGGGCAAGGGCTAAGTGCTGTGCCATCAGAAGTTTGGGAATCCAGTGAACTCATGAAACTTAATCTGTCAAAGAATTCCCTCCAGGATCTGTCAAAAATCTGTGAATATTCTTGCTGCAGTCAAATAAAGCCTCAATAGATGCAGAAACTTAGGCCAGCCAGTTTGATATTCACGAGTATGAAGGTCAAATTTCCTTCTCGTTATCACTGCATTTTGCATGTGTTTTTCATGGTAAATAAAATGTGCAGGACTTTGCCTAAAATACCGATTCAGATGGATGCAGGATTAGCTCTGAAAGTCAAGTAGTTTAGCTATTTTTAGTTAAGTCTTTTCAAGTAATTGAATGCCATTAATTCATCAAATACATGCAGACCTTGATTTTGTCTAGGAACAAGATTAAAGATTGGCCAGGTGCAATTCTCAAGTCGCTACCTAATCTCATGTGTTTAAAGCTGGACAATAATCCACTTAAACAGGTAAAAAGTAATTCATGTATGTACCCTGCTTTTGTTTCTTTTTATTGTTATTATTTTTATTTTAAATTAGAGAGATGTTCTAGAGTTTGAATTGTACGTTGGCATTTTAAAAGAAGGTTTTTGTTGATACTTAGACTTCTTTCTTAAATTCTGTAATATGCTATTTTCTCAAAGGATTTAGCTACATTGTTGTATTTTTAAGGTCATACATTCATTATTCAATGATAGACTGGTGGCATAGTTTTGAAGTTTTGCATTATTTTAAATTTATTGTTTCCTGACATTCTGGACTGGCCCCTCCTTTTTAATGTCTTGAATGCTGAATGGTCGACTGTTCTCCTGTTATTGGCTTCTTTACTTATAAAACTCTAACCAGGTGATGTTACTTGATTTTGTAGATTCCGTCAGATGGGTTTTAAGCAATCTCCATGCTACAGGTTTTAGATCTTAGTGGCAATATAGCTTCCTTGCCAGAGCACCCAACATTTTCCAGCGTACCACTTCTGCAAGAGCTTTACGTAAGGCTAGTTCACAAGAAACTGGGATATTTTCCAGCCCTCCAAGATTCTTGTCATACTTACTTGTGCCGTGTTCTTATGTATTAA

mRNA sequence

ATGGAATTAGCGCCTCCTTGTGAATCGACTCGGACTTGCCACTTGTGCTACGTCATCGTAGAGCTTTCTCTAGAAGGGCAAGGGCTAAGTGCTGTGCCATCAGAAGTTTGGGAATCCAGTGAACTCATGAAACTTAATCTGTCAAAGAATTCCCTCCAGGATCTGTCAAAAATCTATGGATGCAGGATTAGCTCTGAAAGTCAAACCTTGATTTTGTCTAGGAACAAGATTAAAGATTGGCCAGGTGCAATTCTCAAGTCGCTACCTAATCTCATGTGTTTAAAGCTGGACAATAATCCACTTAAACAGAGAGATGTTCTAGAGTTTGAATTGTACGTTGGCATTTTAAAAGAAGATTCCGTCAGATGGGTTTTAAGCAATCTCCATGCTACAGATCTTAGTGGCAATATAGCTTCCTTGCCAGAGCACCCAACATTTTCCAGCGTACCACTTCTGCAAGAGCTTTACGTAAGGCTAGTTCACAAGAAACTGGGATATTTTCCAGCCCTCCAAGATTCTTGTCATACTTACTTGTGCCGTGTTCTTATGTATTAA

Coding sequence (CDS)

ATGGAATTAGCGCCTCCTTGTGAATCGACTCGGACTTGCCACTTGTGCTACGTCATCGTAGAGCTTTCTCTAGAAGGGCAAGGGCTAAGTGCTGTGCCATCAGAAGTTTGGGAATCCAGTGAACTCATGAAACTTAATCTGTCAAAGAATTCCCTCCAGGATCTGTCAAAAATCTATGGATGCAGGATTAGCTCTGAAAGTCAAACCTTGATTTTGTCTAGGAACAAGATTAAAGATTGGCCAGGTGCAATTCTCAAGTCGCTACCTAATCTCATGTGTTTAAAGCTGGACAATAATCCACTTAAACAGAGAGATGTTCTAGAGTTTGAATTGTACGTTGGCATTTTAAAAGAAGATTCCGTCAGATGGGTTTTAAGCAATCTCCATGCTACAGATCTTAGTGGCAATATAGCTTCCTTGCCAGAGCACCCAACATTTTCCAGCGTACCACTTCTGCAAGAGCTTTACGTAAGGCTAGTTCACAAGAAACTGGGATATTTTCCAGCCCTCCAAGATTCTTGTCATACTTACTTGTGCCGTGTTCTTATGTATTAA

Protein sequence

MELAPPCESTRTCHLCYVIVELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLSKIYGCRISSESQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIASLPEHPTFSSVPLLQELYVRLVHKKLGYFPALQDSCHTYLCRVLMY

Homology

[Close]

BLAST of CmUC10G188620 vs. NCBI nr
Match: XP_038905189.1 (plant intracellular Ras-group-related LRR protein 6 isoform X2 [Benincasa hispida])

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-39
Identity = 96/139 (69.06%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLS-KIYGCRISSESQTLILSRNKIKD 80
           +LSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L  ++  C   +  QTLILSRNKIKD
Sbjct: 362 DLSLEGQGLSAVPSEVWESSELMKLDLSKNSLQELPVELSSC---TSLQTLILSRNKIKD 421

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILKSLPNL+CLKLDNNPLKQ            +  D  +  +S L   DLSGNIAS
Sbjct: 422 WPGAILKSLPNLICLKLDNNPLKQ------------IPSDGFQ-AVSMLQVLDLSGNIAS 481

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLLQELY+R
Sbjct: 482 LPEHPTFSSLPLLQELYLR 484

[Close]

BLAST of CmUC10G188620 vs. NCBI nr
Match: XP_038905186.1 (plant intracellular Ras-group-related LRR protein 6 isoform X1 [Benincasa hispida])

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-39
Identity = 96/139 (69.06%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLS-KIYGCRISSESQTLILSRNKIKD 80
           +LSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L  ++  C   +  QTLILSRNKIKD
Sbjct: 377 DLSLEGQGLSAVPSEVWESSELMKLDLSKNSLQELPVELSSC---TSLQTLILSRNKIKD 436

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILKSLPNL+CLKLDNNPLKQ            +  D  +  +S L   DLSGNIAS
Sbjct: 437 WPGAILKSLPNLICLKLDNNPLKQ------------IPSDGFQ-AVSMLQVLDLSGNIAS 496

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLLQELY+R
Sbjct: 497 LPEHPTFSSLPLLQELYLR 499

[Close]

BLAST of CmUC10G188620 vs. NCBI nr
Match: XP_004133702.1 (plant intracellular Ras-group-related LRR protein 6 [Cucumis sativus] >KGN56230.1 hypothetical protein Csa_010148 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 2.8e-38
Identity = 94/139 (67.63%), Postives = 105/139 (75.54%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLS-KIYGCRISSESQTLILSRNKIKD 80
           ELSLEGQGLSAVPSEVWESSELMKL+LSKNS Q+L  ++  C   +  QTLILSRNKIKD
Sbjct: 362 ELSLEGQGLSAVPSEVWESSELMKLDLSKNSFQELPVELSSC---TSLQTLILSRNKIKD 421

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILK+LPNL CLKLDNNPLKQ            +  D  +  +S L   DLSGNIA 
Sbjct: 422 WPGAILKTLPNLTCLKLDNNPLKQ------------IPSDGFQ-AVSKLQVLDLSGNIAC 481

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLLQELY+R
Sbjct: 482 LPEHPTFSSLPLLQELYLR 484

[Close]

BLAST of CmUC10G188620 vs. NCBI nr
Match: TYK23805.1 (plant intracellular Ras-group-related LRR protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 6.1e-38
Identity = 94/139 (67.63%), Postives = 105/139 (75.54%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLS-KIYGCRISSESQTLILSRNKIKD 80
           ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L  ++  C   +  Q LILSRNKIKD
Sbjct: 362 ELSLEGQGLSAVPSEVWESSELMKLDLSKNSLQELPVELSSC---TSLQILILSRNKIKD 421

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILK+LPNL CLKLDNNPLKQ            +  D  +  +S L   DLSGNIA 
Sbjct: 422 WPGAILKTLPNLTCLKLDNNPLKQ------------ISSDGFQ-AVSMLQVLDLSGNIAC 481

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLLQELY+R
Sbjct: 482 LPEHPTFSSLPLLQELYLR 484

[Close]

BLAST of CmUC10G188620 vs. NCBI nr
Match: XP_008452268.1 (PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 6.1e-38
Identity = 94/139 (67.63%), Postives = 105/139 (75.54%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLS-KIYGCRISSESQTLILSRNKIKD 80
           ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L  ++  C   +  Q LILSRNKIKD
Sbjct: 362 ELSLEGQGLSAVPSEVWESSELMKLDLSKNSLQELPVELSSC---TSLQILILSRNKIKD 421

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILK+LPNL CLKLDNNPLKQ            +  D  +  +S L   DLSGNIA 
Sbjct: 422 WPGAILKTLPNLTCLKLDNNPLKQ------------ISSDGFQ-AVSMLQVLDLSGNIAC 481

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLLQELY+R
Sbjct: 482 LPEHPTFSSLPLLQELYLR 484

[Close]

BLAST of CmUC10G188620 vs. ExPASy Swiss-Prot
Match: Q6K7R2 (Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL6 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 66/148 (44.59%), Postives = 87/148 (58.78%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLSKIYGCRISSESQTLILSRNKIKDW 80
           EL L G G+++VP   WE++++MKL+LSKNS++DL       + S  Q+LILS NKIK W
Sbjct: 364 ELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPN--ELSLCSSLQSLILSNNKIKRW 423

Query: 81  PGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIASL 140
           PG +  SL +L  LKLDNNPL +    + E              LS L   DLSG+ +SL
Sbjct: 424 PGTVFSSLASLSLLKLDNNPLAEILATDLE-------------ALSKLEVLDLSGSASSL 483

Query: 141 PEHPTFSSVPLLQELYVRLVHKKLGYFP 169
           PE    S +P L+ELY+R    KL  FP
Sbjct: 484 PEPSAVSKLPHLKELYLR--RMKLHGFP 494

[Close]

BLAST of CmUC10G188620 vs. ExPASy Swiss-Prot
Match: Q6R5P0 (Toll-like receptor 11 OS=Mus musculus OX=10090 GN=Tlr11 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-04
Identity = 42/136 (30.88%), Postives = 59/136 (43.38%), Query Frame = 0


Query: 22  LSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLSKIYGCRISSESQTLILSRNKIKDWP 81
           LSL G G+  VP+ +   SEL  L+L KN +Q++ +          + L L  N ++  P
Sbjct: 269 LSLVGTGIEKVPASLTGYSELRALDLGKNQIQNILENGEIPGYKALEFLSLHDNHLQTLP 328

Query: 82  GAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIASLP 141
              L +LP L  L L  N L        EL  G+          +NL   DLS N     
Sbjct: 329 TRFLHTLPQLQKLNLSMNKLGP----ILELPEGLFS--------TNLKVLDLSYNQLCDV 388

Query: 142 EHPTFSSVPLLQELYV 158
            H   S +  LQEL++
Sbjct: 389 PHGALSLLSQLQELWL 392

[Close]

BLAST of CmUC10G188620 vs. ExPASy TrEMBL
Match: A0A0A0L2M1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104350 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 94/139 (67.63%), Postives = 105/139 (75.54%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLS-KIYGCRISSESQTLILSRNKIKD 80
           ELSLEGQGLSAVPSEVWESSELMKL+LSKNS Q+L  ++  C   +  QTLILSRNKIKD
Sbjct: 362 ELSLEGQGLSAVPSEVWESSELMKLDLSKNSFQELPVELSSC---TSLQTLILSRNKIKD 421

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILK+LPNL CLKLDNNPLKQ            +  D  +  +S L   DLSGNIA 
Sbjct: 422 WPGAILKTLPNLTCLKLDNNPLKQ------------IPSDGFQ-AVSKLQVLDLSGNIAC 481

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLLQELY+R
Sbjct: 482 LPEHPTFSSLPLLQELYLR 484

[Close]

BLAST of CmUC10G188620 vs. ExPASy TrEMBL
Match: A0A5D3DJP1 (Plant intracellular Ras-group-related LRR protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold580G00180 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.0e-38
Identity = 94/139 (67.63%), Postives = 105/139 (75.54%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLS-KIYGCRISSESQTLILSRNKIKD 80
           ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L  ++  C   +  Q LILSRNKIKD
Sbjct: 362 ELSLEGQGLSAVPSEVWESSELMKLDLSKNSLQELPVELSSC---TSLQILILSRNKIKD 421

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILK+LPNL CLKLDNNPLKQ            +  D  +  +S L   DLSGNIA 
Sbjct: 422 WPGAILKTLPNLTCLKLDNNPLKQ------------ISSDGFQ-AVSMLQVLDLSGNIAC 481

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLLQELY+R
Sbjct: 482 LPEHPTFSSLPLLQELYLR 484

[Close]

BLAST of CmUC10G188620 vs. ExPASy TrEMBL
Match: A0A1S3BTH8 (plant intracellular Ras-group-related LRR protein 6 OS=Cucumis melo OX=3656 GN=LOC103493340 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.0e-38
Identity = 94/139 (67.63%), Postives = 105/139 (75.54%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLS-KIYGCRISSESQTLILSRNKIKD 80
           ELSLEGQGLSAVPSEVWESSELMKL+LSKNSLQ+L  ++  C   +  Q LILSRNKIKD
Sbjct: 362 ELSLEGQGLSAVPSEVWESSELMKLDLSKNSLQELPVELSSC---TSLQILILSRNKIKD 421

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILK+LPNL CLKLDNNPLKQ            +  D  +  +S L   DLSGNIA 
Sbjct: 422 WPGAILKTLPNLTCLKLDNNPLKQ------------ISSDGFQ-AVSMLQVLDLSGNIAC 481

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLLQELY+R
Sbjct: 482 LPEHPTFSSLPLLQELYLR 484

[Close]

BLAST of CmUC10G188620 vs. ExPASy TrEMBL
Match: A0A6J1ENG2 (plant intracellular Ras-group-related LRR protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111435942 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.9e-38
Identity = 94/139 (67.63%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDL-SKIYGCRISSESQTLILSRNKIKD 80
           ELSLEGQGLSAVPSEVWE SELMKL+LSKNSLQ+L  ++  C   +  QTLILSRNKIKD
Sbjct: 362 ELSLEGQGLSAVPSEVWECSELMKLDLSKNSLQELPGELSSC---TSLQTLILSRNKIKD 421

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILKSLPNLMCLKLDNNPLKQ     F+                 L   DLSGNI S
Sbjct: 422 WPGAILKSLPNLMCLKLDNNPLKQIPSYGFQ-------------ETPMLQVLDLSGNIDS 481

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLL+ELY+R
Sbjct: 482 LPEHPTFSSLPLLRELYLR 484

[Close]

BLAST of CmUC10G188620 vs. ExPASy TrEMBL
Match: A0A6J1CM00 (plant intracellular Ras-group-related LRR protein 6 OS=Momordica charantia OX=3673 GN=LOC111012848 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37
Identity = 92/139 (66.19%), Postives = 104/139 (74.82%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLS-KIYGCRISSESQTLILSRNKIKD 80
           ELSLEGQGLS VPSEVWES ELMKL+LSKNS+Q+L  ++  C   +  QTLILSRNKIKD
Sbjct: 362 ELSLEGQGLSTVPSEVWESCELMKLDLSKNSIQELPVELSSC---TSLQTLILSRNKIKD 421

Query: 81  WPGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIAS 140
           WPGAILKSLPNL+CLKLDNNPLKQ            +  D  +  +S L   DLS NI S
Sbjct: 422 WPGAILKSLPNLVCLKLDNNPLKQ------------IPSDGFQ-AVSMLQVLDLSANIGS 481

Query: 141 LPEHPTFSSVPLLQELYVR 159
           LPEHPTFSS+PLLQELY+R
Sbjct: 482 LPEHPTFSSLPLLQELYLR 484

[Close]

BLAST of CmUC10G188620 vs. TAIR 10
Match: AT3G15410.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 79/137 (57.66%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLSKIYGCRISSESQTLILSRNKIKDW 80
           ELSLEG  LS VPSEVWES E+ K+NLSKNS+++L       +S   QTLILSRNKIKDW
Sbjct: 362 ELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVS--LQTLILSRNKIKDW 421

Query: 81  PGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIASL 140
           PGAILKSLPNLMCLKLDNNPL Q  +  F+             V+S L   DLS N  S 
Sbjct: 422 PGAILKSLPNLMCLKLDNNPLNQIPLDGFQ-------------VVSGLQILDLSVNAVSF 481

Query: 141 PEHPTFSSVPLLQELYV 158
            EHP F  +P L+ELY+
Sbjct: 482 REHPKFCHLPQLRELYL 483

[Close]

BLAST of CmUC10G188620 vs. TAIR 10
Match: AT3G15410.2 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 79/137 (57.66%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 21  ELSLEGQGLSAVPSEVWESSELMKLNLSKNSLQDLSKIYGCRISSESQTLILSRNKIKDW 80
           ELSLEG  LS VPSEVWES E+ K+NLSKNS+++L       +S   QTLILSRNKIKDW
Sbjct: 368 ELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVS--LQTLILSRNKIKDW 427

Query: 81  PGAILKSLPNLMCLKLDNNPLKQRDVLEFELYVGILKEDSVRWVLSNLHATDLSGNIASL 140
           PGAILKSLPNLMCLKLDNNPL Q  +  F+             V+S L   DLS N  S 
Sbjct: 428 PGAILKSLPNLMCLKLDNNPLNQIPLDGFQ-------------VVSGLQILDLSVNAVSF 487

Query: 141 PEHPTFSSVPLLQELYV 158
            EHP F  +P L+ELY+
Sbjct: 488 REHPKFCHLPQLRELYL 489

[Close]

BLAST of CmUC10G188620 vs. TAIR 10
Match: AT5G58150.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.6e-04
Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 22  LSLEGQGLSAVPSEVWESSELMKLNLSKNSLQD-LSKIYGCRISSESQTLILSRNKIKDW 81
           L L G  ++++PS++W  S L  LNLS N + + L    G  +S    TL LS N I   
Sbjct: 95  LDLSGNKITSLPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMS--LHTLDLSFNSISGK 154

Query: 82  PGAILKSLPNLMCLKLDNN 100
             A + +L NL  LKL NN
Sbjct: 155 IPAAISNLVNLTTLKLHNN 171

The following BLAST results are available for this feature:

BLAST of CmUC10G188620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905189.1	2.5e-39	69.06	plant intracellular Ras-group-related LRR protein 6 isoform X2 [Benincasa hispid...	[more]
XP_038905186.1	2.5e-39	69.06	plant intracellular Ras-group-related LRR protein 6 isoform X1 [Benincasa hispid...	[more]
XP_004133702.1	2.8e-38	67.63	plant intracellular Ras-group-related LRR protein 6 [Cucumis sativus] >KGN56230....	[more]
TYK23805.1	6.1e-38	67.63	plant intracellular Ras-group-related LRR protein 6 [Cucumis melo var. makuwa]	[more]
XP_008452268.1	6.1e-38	67.63	PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Cucumis melo]	[more]

BLAST of CmUC10G188620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K7R2	1.2e-23	44.59	Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japon...	[more]
Q6R5P0	4.6e-04	30.88	Toll-like receptor 11 OS=Mus musculus OX=10090 GN=Tlr11 PE=1 SV=1	[more]

BLAST of CmUC10G188620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2M1	1.3e-38	67.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104350 PE=4 SV=1	[more]
A0A5D3DJP1	3.0e-38	67.63	Plant intracellular Ras-group-related LRR protein 6 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BTH8	3.0e-38	67.63	plant intracellular Ras-group-related LRR protein 6 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1ENG2	3.9e-38	67.63	plant intracellular Ras-group-related LRR protein 6 OS=Cucurbita moschata OX=366...	[more]
A0A6J1CM00	1.5e-37	66.19	plant intracellular Ras-group-related LRR protein 6 OS=Momordica charantia OX=36...	[more]

BLAST of CmUC10G188620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15410.1	1.7e-33	57.66	Leucine-rich repeat (LRR) family protein	[more]
AT3G15410.2	1.7e-33	57.66	Leucine-rich repeat (LRR) family protein	[more]
AT5G58150.1	3.6e-04	39.24	Leucine-rich repeat protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 20..183 e-value: 1.8E-15 score: 58.5
None	No IPR available	PANTHER	PTHR16083:SF20	LRR RECEPTOR-LIKE KINASE	coord: 65..160
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 65..160
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 15..158
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 41..62 score: 7.072797

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G188620.1	CmUC10G188620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding