Homology
BLAST of CmUC10G186550 vs. NCBI nr
Match:
KAG7015576.1 (Poly(A)-specific ribonuclease PARN [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 627/753 (83.27%), Postives = 666/753 (88.45%), Query Frame = 0
Query: 1 MDPSRSLSALPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVR 60
M+ SR L A RLLCFIRTA YSSAAVTAP ASNS FPLKNVTK NFEA LSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSCFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 AADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
AADFVA+DLEMTGITSAPWRES EFDRFD+RYLKVKDSAEKFAVVQFGVCPFRWDSAKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDA 180
FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTS+EFLAKYQFDFNACI EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
ARKRLNFA+GDE SDASSNV IRD+KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240
Query: 241 GQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKS 300
GQEGSN+YQRQF+TIFFKMRPALTLSDFTSHQ +LI+L
Sbjct: 241 GQEGSNNYQRQFETIFFKMRPALTLSDFTSHQTKLIQL---------------------- 300
Query: 301 YPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAA 360
VIKKHFEDLCFVVV+DGD NLQQLVVYVDSRDDKELLMQEVNSD++EAA
Sbjct: 301 -----------VIKKHFEDLCFVVVDDGDANLQQLVVYVDSRDDKELLMQEVNSDRQEAA 360
Query: 361 EMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFV 420
EMKIQSAIGFRHVIDLL+SEKKLIIGHNCFL DIAHIH KFIGSLPSTAEEFV
Sbjct: 361 EMKIQSAIGFRHVIDLLSSEKKLIIGHNCFL--------DIAHIHKKFIGSLPSTAEEFV 420
Query: 421 SSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAFKSGVR 480
SSIGKHFP+IMDTKILLNGN +LQ+RMKKSSTSLSSAF LLCPHIAFSSQSNPAF SGV+
Sbjct: 421 SSIGKHFPFIMDTKILLNGNGVLQQRMKKSSTSLSSAFALLCPHIAFSSQSNPAFSSGVQ 480
Query: 481 VEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQK 540
VEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GIDF L PSENL DNE LQK
Sbjct: 481 VEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGIDFVL--PSENLADNEKLQK 540
Query: 541 HVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIK 600
H+NHLYLSWASGDIIDLSTGNRMTE LRSNRSKKHQAKISFENIVLIWGFP +LNAR+IK
Sbjct: 541 HINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKISFENIVLIWGFPANLNARKIK 600
Query: 601 ECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLF 660
ECISKVFGL N+VSVYH+DESAVFVQFAKPEMVSEFLDLK+NLERHDDPISVLHPLT+LF
Sbjct: 601 ECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKKNLERHDDPISVLHPLTELF 660
Query: 661 EARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEA------ 720
A++THAAGYEAYK+ICSSP+ K+LFADQAEAVGINQKT IK E+VKSQMHEA
Sbjct: 661 GAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTSIKPESVKSQMHEAANSSLT 710
Query: 721 VEMLNETTEIQGMEMGSNDLSSTNYHSLRSSSM 746
+MLNETTE+QGME+G+NDL +TNYH L+SSSM
Sbjct: 721 ADMLNETTEVQGMEVGANDLRNTNYHILQSSSM 710
BLAST of CmUC10G186550 vs. NCBI nr
Match:
XP_022932379.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita moschata])
HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 628/753 (83.40%), Postives = 664/753 (88.18%), Query Frame = 0
Query: 1 MDPSRSLSALPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVR 60
M+ SR L A RLLCFIRTA YSSAAVT P ASNSSFPLKNVTK NFEA LSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTTPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 AADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
AADFVA+DLEMTGITSAPWRES EFDRFD+RYLKVKDSAEKFAVVQFGVCPFRWDSAKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDA 180
FVAHPHNFFVFPRHEI VDGPSSEFLCQTTS+EFLAKYQFDFNACI EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEILVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
ARKRLNFA+GDE SDASSNV IRD+KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240
Query: 241 GQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKS 300
GQEGSNDYQRQF+TIFFKMRPALTLSDFTSHQ +LI+L
Sbjct: 241 GQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQL---------------------- 300
Query: 301 YPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAA 360
VIKKHFEDLCFVVV+DGD NLQQLVVYVDSRDDKELLMQEVNSD++EAA
Sbjct: 301 -----------VIKKHFEDLCFVVVDDGDANLQQLVVYVDSRDDKELLMQEVNSDRQEAA 360
Query: 361 EMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFV 420
EMKIQSAIGFRHVIDLL+SEKKLIIGHNCFL DIAHIH KFIGSLPSTAEEFV
Sbjct: 361 EMKIQSAIGFRHVIDLLSSEKKLIIGHNCFL--------DIAHIHKKFIGSLPSTAEEFV 420
Query: 421 SSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAFKSGVR 480
SSIGKHFP+IMDTKILLNGN ILQ+RMKKSSTSLSSAF LLCPHIAFSSQSNPAF SGV+
Sbjct: 421 SSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFALLCPHIAFSSQSNPAFSSGVQ 480
Query: 481 VEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQK 540
VEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GIDF L PSENL DNE LQK
Sbjct: 481 VEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGIDFVL--PSENLADNEKLQK 540
Query: 541 HVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIK 600
H+NHLYLSWASGDIIDLSTGNRMTE LRSNRSKKHQAKISFENIVLIWGFP +LNAR+IK
Sbjct: 541 HINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKISFENIVLIWGFPANLNARKIK 600
Query: 601 ECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLF 660
ECISKVFGL N+VSVYH+DESAVFVQFAKPEMVSEFLDLK+NLERHDDPISVLHPLT+LF
Sbjct: 601 ECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKKNLERHDDPISVLHPLTELF 660
Query: 661 EARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEA------ 720
A+ T+AAGYEAYK+ICSSP+ K+LFADQAEAVGINQKT IK E+VKSQMHEA
Sbjct: 661 GAKGTNAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTSIKPESVKSQMHEAANNSLT 710
Query: 721 VEMLNETTEIQGMEMGSNDLSSTNYHSLRSSSM 746
+MLNETTE+QGME+G+NDL +TNYH LRSSSM
Sbjct: 721 ADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of CmUC10G186550 vs. NCBI nr
Match:
XP_023553318.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 627/753 (83.27%), Postives = 663/753 (88.05%), Query Frame = 0
Query: 1 MDPSRSLSALPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVR 60
M+ SR L A RLLCF RTA YSSAAV++P ASNSSFPLKNVTK NFEA LSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFTRTATYSSAAVSSPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 AADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
AADFVA+DLEMTGITSAPWRES EFDRFD+RYLKVKDSAEKFAVVQFGVCPFRWDSAKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDA 180
FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTS+EFLAKYQFDFNACI EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
ARKRLNFA+GDE DASSNV IRD KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETLDASSNVTNIRDPKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240
Query: 241 GQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKS 300
GQEGSNDYQRQF+TIFFKMRPALTLSDFTSHQ +LI+L
Sbjct: 241 GQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQL---------------------- 300
Query: 301 YPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAA 360
VIKKHFEDLCFVVV+DGD NLQQLVVYVDSRDDKELLMQEVNSDQ+EAA
Sbjct: 301 -----------VIKKHFEDLCFVVVDDGDANLQQLVVYVDSRDDKELLMQEVNSDQREAA 360
Query: 361 EMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFV 420
EMKIQSAIGFRHVIDLL+SEKKLIIGHNCFL DIAHIH KFIGSLPSTAEEFV
Sbjct: 361 EMKIQSAIGFRHVIDLLSSEKKLIIGHNCFL--------DIAHIHKKFIGSLPSTAEEFV 420
Query: 421 SSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAFKSGVR 480
SSIGKHFP+IMDTKILLNGN ILQ+RMKKSSTSLSSAF LLCPHIAFSSQSNPAF SGV+
Sbjct: 421 SSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFALLCPHIAFSSQSNPAFSSGVQ 480
Query: 481 VEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQK 540
VEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GIDF L PSENL DNE LQK
Sbjct: 481 VEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGIDFVL--PSENLADNEKLQK 540
Query: 541 HVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIK 600
H+NHLYLSWASGDIIDLSTGNR TE LRSNRSKKHQAKISFENIVLIWGFP +LNAR+IK
Sbjct: 541 HINHLYLSWASGDIIDLSTGNRTTEPLRSNRSKKHQAKISFENIVLIWGFPANLNARKIK 600
Query: 601 ECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLF 660
ECISKVFGL N+VSVYH+DESAVFVQFAKPEMVSEFLDLK+NLERHDDPISVLHPLT+LF
Sbjct: 601 ECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKKNLERHDDPISVLHPLTELF 660
Query: 661 EARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEA------ 720
A++THAAGYEAYK+ICSSP+ K+LFADQAEAVGINQKT IK E+VKSQMHEA
Sbjct: 661 GAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTSIKPESVKSQMHEAANNNLT 710
Query: 721 VEMLNETTEIQGMEMGSNDLSSTNYHSLRSSSM 746
+MLNETTE+QGME+G+NDL +TNYH LRSSSM
Sbjct: 721 ADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of CmUC10G186550 vs. NCBI nr
Match:
KAG6577517.1 (Poly(A)-specific ribonuclease PARN, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1209.1 bits (3127), Expect = 0.0e+00
Identity = 624/753 (82.87%), Postives = 664/753 (88.18%), Query Frame = 0
Query: 1 MDPSRSLSALPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVR 60
M+ SR L A RLLCFIRTA YSSAAVTAP ASNS FPLKNVTK NFEA LSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSCFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 AADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
AADFVA+DLEMTGITSAPWRES EFDRFD+RYLKVKDSAEKFAVVQFGVCPFRWDSAKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDA 180
FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTS+EFLAKYQFDFN CI EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNFCIHEGISYLSRAHEDA 180
Query: 181 ARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
ARKRLNFA+GDE SDASSNV IRD+KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240
Query: 241 GQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKS 300
GQEGSN+YQRQF+TIFFKMRPALTLSDFTSHQ +LI+L
Sbjct: 241 GQEGSNNYQRQFETIFFKMRPALTLSDFTSHQTKLIQL---------------------- 300
Query: 301 YPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAA 360
VIKKHFEDLCF+VV+DGD NLQQLVVYVDSRDDKELLMQEVNSD++EAA
Sbjct: 301 -----------VIKKHFEDLCFIVVDDGDANLQQLVVYVDSRDDKELLMQEVNSDRQEAA 360
Query: 361 EMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFV 420
EMKIQSAIGFRHVIDLL+SEKKLIIGHNCFL DIAHIH KFIGSLPSTAEEFV
Sbjct: 361 EMKIQSAIGFRHVIDLLSSEKKLIIGHNCFL--------DIAHIHKKFIGSLPSTAEEFV 420
Query: 421 SSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAFKSGVR 480
SSIGKHFP+IMDTKILLNGN +LQ+RMKKSSTSLSSAF LLCPHIAFSSQSNPAF SGV+
Sbjct: 421 SSIGKHFPFIMDTKILLNGNGVLQQRMKKSSTSLSSAFALLCPHIAFSSQSNPAFSSGVQ 480
Query: 481 VEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQK 540
VEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GIDF L PSENL DNE LQK
Sbjct: 481 VEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGIDFVL--PSENLADNEKLQK 540
Query: 541 HVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIK 600
H+NHLYLSWASGDIIDLSTGNRMTE LRSNRSKKHQAKISFENIVLIWGFP +LNAR+IK
Sbjct: 541 HINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKISFENIVLIWGFPANLNARKIK 600
Query: 601 ECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLF 660
ECISKVFGL N+VSVYH+DESAVFVQFAKPEMVSEFLDLK+ LERHDDPISVLHPLT+LF
Sbjct: 601 ECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKKILERHDDPISVLHPLTELF 660
Query: 661 EARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEA------ 720
A++THAAGYEAYK+ICSSP+ K+LFADQAEAVGINQKT IK E+VKSQMHEA
Sbjct: 661 GAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTSIKPESVKSQMHEAANSSLT 710
Query: 721 VEMLNETTEIQGMEMGSNDLSSTNYHSLRSSSM 746
+MLNETTE+QGME+G+NDL +TNYH L+SSSM
Sbjct: 721 ADMLNETTEVQGMEVGANDLRNTNYHILQSSSM 710
BLAST of CmUC10G186550 vs. NCBI nr
Match:
XP_023007721.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita maxima])
HSP 1 Score: 1197.6 bits (3097), Expect = 0.0e+00
Identity = 620/753 (82.34%), Postives = 659/753 (87.52%), Query Frame = 0
Query: 1 MDPSRSLSALPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVR 60
M+ SR L A RLLCFIRTA YSSAAVTAP ASNSSFPLKNVTK NFEA LSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 AADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
AADFVA+DLEMTGITSAPWRES EFDRFD+RYLKVKDSAEKFAVVQFGVCPFRWDSAKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDA 180
FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTS+EFLAKYQFDFNACI EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
ARKRLNFA+GDE DASSNV IR++KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETLDASSNVTNIRNQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240
Query: 241 GQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKS 300
GQEG+NDYQRQF+TIFFKMRPALTLSDFTSHQ +LI+L
Sbjct: 241 GQEGANDYQRQFETIFFKMRPALTLSDFTSHQTKLIQL---------------------- 300
Query: 301 YPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAA 360
VIKKHFEDLCFVVV+DG+ NLQQLVVYVDSRDDKELLMQEVN D++EAA
Sbjct: 301 -----------VIKKHFEDLCFVVVDDGNANLQQLVVYVDSRDDKELLMQEVNCDRQEAA 360
Query: 361 EMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFV 420
EMKIQSAIGFRHVIDLL+SEKKLIIGHNCFL DIAHIH KFIGSLP TAEEFV
Sbjct: 361 EMKIQSAIGFRHVIDLLSSEKKLIIGHNCFL--------DIAHIHKKFIGSLPLTAEEFV 420
Query: 421 SSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAFKSGVR 480
SSIGK FP IMDTKILLNGN ILQ+RMKKSSTSLSSAF LLCPHIAFSSQSNPAF SGV+
Sbjct: 421 SSIGKRFPLIMDTKILLNGNGILQQRMKKSSTSLSSAFALLCPHIAFSSQSNPAFNSGVQ 480
Query: 481 VEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQK 540
VEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GIDF L PSENL DNE LQK
Sbjct: 481 VEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGIDFVL--PSENLADNEKLQK 540
Query: 541 HVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIK 600
H+NHLYLSWASGDIIDLSTGNRMTE LRSNRSK+HQ KISFENIVLIWGFP +LNAR+IK
Sbjct: 541 HINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKRHQVKISFENIVLIWGFPANLNARKIK 600
Query: 601 ECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLF 660
ECISKVFGL N+VSVYH+DESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLT+LF
Sbjct: 601 ECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTELF 660
Query: 661 EARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEA------ 720
A++THAAGYEAYK+ICSSP+ K+LFADQAEAVGINQKT IK ++VK QMHEA
Sbjct: 661 GAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTMSIKLKSVKGQMHEAANSSLT 710
Query: 721 VEMLNETTEIQGMEMGSNDLSSTNYHSLRSSSM 746
+ML ETTE+QGME+G+NDL +TNYH LRSSSM
Sbjct: 721 ADMLKETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of CmUC10G186550 vs. ExPASy Swiss-Prot
Match:
Q9LG26 (Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 SV=2)
HSP 1 Score: 734.2 bits (1894), Expect = 1.5e-210
Identity = 379/689 (55.01%), Postives = 478/689 (69.38%), Query Frame = 0
Query: 10 LPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVRAADFVAVDL 69
L L+C ++A + T+ ++ ++FPLK+VT+ NFE L++LR+ V+AADFVA+DL
Sbjct: 9 LRSLVCSFSSSA-AETVTTSTAASATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDL 68
Query: 70 EMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNSFVAHPHNFF 129
EMTG+TSAPWR+SLEFDR+D+RYLKVKDSAEKFAVVQFGVCPFRWDS SFV++PHNFF
Sbjct: 69 EMTGVTSAPWRDSLEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFF 128
Query: 130 VFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDAARKRLNFAY 189
VFPR E+ D P+ EFLCQTTSM+FLAKYQFDFN CI EGISYLSR E+ A KRL +
Sbjct: 129 VFPRQELTFDPPAHEFLCQTTSMDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLH 188
Query: 190 GDEMSDASSNVIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQGQEGSNDYQRQ 249
G++ D SS + K + +ADVLF RM+ L+EWR LL N + SN +
Sbjct: 189 GEDGID-SSGETEELKLVRLADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQS 248
Query: 250 FQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKSYPCLAACEHMQ 309
+T+F MRPAL+L FTSHQ+R++
Sbjct: 249 METVFHHMRPALSLKGFTSHQLRVLN---------------------------------S 308
Query: 310 VIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAAEMKIQSAIGFR 369
V++KHF DL ++ ND + + +VVY DS DKE LM+E ++K AE KIQSAIGFR
Sbjct: 309 VLRKHFGDLVYIHSNDKSSSSRDIVVYTDSDSDKENLMKEAKDERKRLAERKIQSAIGFR 368
Query: 370 HVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFVSSIGKHFPYIM 429
VIDLLASEKKLI+GHNCFL DIAH+++KF+G LPSTAE+FV+SI HFPYI+
Sbjct: 369 QVIDLLASEKKLIVGHNCFL--------DIAHVYSKFVGPLPSTAEKFVASINSHFPYIV 428
Query: 430 DTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAF-KSGVRVEVQVDDLRS 489
DTKILLN N +L +RMKKSSTSLSSAF LCP I FSS+S+ +F + V ++V++D++R
Sbjct: 429 DTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRC 488
Query: 490 SNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQKHVNHLYLSWA 549
SNWN+G KHEAGYDAFMTGC+FAQACN +G DF S ++ NE L+K++N LYLSW
Sbjct: 489 SNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWT 548
Query: 550 SGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIKECISKVFGLT 609
GDIIDL TG+ SN +K +ENIVLIW FP L AR IKECI K FG
Sbjct: 549 RGDIIDLRTGH-------SNADNWRVSKFKYENIVLIWNFPRKLKARGIKECICKAFGSA 608
Query: 610 NVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLFEARTTHAAGY 669
+V SVYH+D+SAVFV F E+V +FL LK LE D P+SVLHPL+K+ E T AA Y
Sbjct: 609 SVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAADY 647
Query: 670 EAYKKICSSPISKLLFADQAEAVGINQKT 698
EAYK+ICSS +S+++F+DQAE VG+ +T
Sbjct: 669 EAYKEICSSHVSEVMFSDQAETVGVKSRT 647
BLAST of CmUC10G186550 vs. ExPASy Swiss-Prot
Match:
Q8W4C3 (Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g25430 PE=2 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 5.9e-50
Identity = 166/664 (25.00%), Postives = 293/664 (44.13%), Query Frame = 0
Query: 20 AAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVRAADFVAVDLEMTGITSAPW 79
++ S+ A T+ + + +K V K NF L E+RT + ++DF+A+ L+ TG +A W
Sbjct: 7 SSISATAGNTKTL-NQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAW 66
Query: 80 RESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNSFVAHPHNFFVFPRHEIQVD 139
D YLK K +AE++ ++QF +CPF +K HP+NF +FPR E++
Sbjct: 67 HRVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSK--LTVHPYNFHLFPRDELKCG 126
Query: 140 GPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDAARKRLNFAYGDEMSDASSN 199
PS F CQ + + +A+ FDFN CI EGISYLSRA E A++ + E + +
Sbjct: 127 MPSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASK------FLSENPILADS 186
Query: 200 VIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQGQEGSNDYQRQFQTIF----- 259
V +AD +F R+++R+ WR + + + G +D + +
Sbjct: 187 VTVSSSPATVADTVFVGRIRSRVKNWRQSCIDSGS-----KTGDDDLVSSLRRLVLGSEQ 246
Query: 260 FKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKSYPCLAACEHMQVIKKH 319
+ R LT+ + Q++LI ++++ +
Sbjct: 247 YGSRLCLTIDVCSERQVQLI---------------------------------LEMLTEF 306
Query: 320 FEDLCFVVVNDGDDNLQQL-VVYVDSRDDKELLMQEVNSDQKEAAEMKIQSAIGFRHVID 379
+D+ ++V Q + V++ S++DK+L +E+ +KE + + GFR V+D
Sbjct: 307 SDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKDLEKE----ENRRVRGFREVVD 366
Query: 380 LLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFVSSIGKHFPYIMDTKI 439
++S +K ++ N + D IH KF+G LPS ++F SS+ FP ++D
Sbjct: 367 FISSSQKPVVSQN--------YLSDFTSIHAKFLGPLPSNVDDFSSSLSSAFPNVVDLSQ 426
Query: 440 LLNGNSILQRRMKKSSTSLSSAFGLLCP-HIAFSSQSNPAFKSGVRVEVQVDDLRSSNWN 499
+ S L + ++SS P + ++Q P V++D+ S+
Sbjct: 427 FMKEISPLS-NISNLPAAMSSLNRFFAPVDVEVANQGCP---------VKLDEGHQSH-- 486
Query: 500 SGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQKHVNHLYLSWASGDI 559
G +A M +FA+ C + +S + NE+ Q S +
Sbjct: 487 -------GQNAVMISQLFAKLCTI------QKSDLSTIQSNEDFQ-----ALASDEHANS 546
Query: 560 IDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIKECISKVFGL-TNVV 619
+ + N E+++ K+ ++S EN+V IWG + A ++K + K +
Sbjct: 547 VTSCSKNAGDENVKV--WSKNSRRVSSENLVFIWGLGKKMTAAKLKNVLQKSHPVFAREF 572
Query: 620 SVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLFEARTTHAAGYEAY 676
V ++D S+ + F + FL N E+ D + + A AGYE Y
Sbjct: 607 DVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDGSL-------REMVAEGLRGAGYETY 572
BLAST of CmUC10G186550 vs. ExPASy Swiss-Prot
Match:
Q7ZU92 (Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2)
HSP 1 Score: 141.4 bits (355), Expect = 4.3e-32
Identity = 128/507 (25.25%), Postives = 211/507 (41.62%), Query Frame = 0
Query: 43 VTKLNFEAALSELRTHVRAADFVAVDLEMTGITSAPWRESLE--FDRFDIRYLKVKDSAE 102
VT+ NF+ L E+ V+ ADF+++D E TGI+ P +L D + RY K++ +
Sbjct: 3 VTRQNFKEVLPEVCNAVQEADFISIDGEFTGISDGPSVSALTNGLDTPEERYTKLRKHSM 62
Query: 103 KFAVVQFGVCPFRWDSAKNSFVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQF 162
F + QFGVC FR+D +++++ NF++FP+ P +F+CQ++S++FLA F
Sbjct: 63 NFLLFQFGVCTFRYDQNQSTYITKAFNFYIFPK-PFSRTSPDIKFICQSSSIDFLASQGF 122
Query: 163 DFNACIREGISYLSRAHEDAARKRLNFAYGDEMSDASSNVIRDKKRIGIADVLFKERMKN 222
DFN R GI YL++ E R++ G +M+ A G+ +V +R
Sbjct: 123 DFNKVFRSGIPYLNQEEECQLREQYEERRG-QMNGAGPVSYTPPSGTGVCNVPEDQREFI 182
Query: 223 RLHEWRDRLLSERNMEFQGQEGSNDYQRQ--FQTIFFKMRPALTLSDFTSHQIRLIRLKL 282
R E + L + + E +QR+ +QT+ K L
Sbjct: 183 RSVEEKVEALLKNTDQTLDLEPCTGFQRKLIYQTLNSKYSKGL----------------- 242
Query: 283 SVSDIKYFSNSTFCYLFIKSYPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVD 342
H E L + ++ + +
Sbjct: 243 -----------------------------------HVEAL--------ETEKKERFIQIS 302
Query: 343 SRDDKELLMQEVNSDQKEAAEMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPD 402
DD+E +E Q+E E + A+GF VI ++ KL++GHN L D
Sbjct: 303 KVDDEERRRREQQKQQREQEE--LNDAVGFSRVIRAISKSGKLVVGHNMLL--------D 362
Query: 403 IAHIHTKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGL 462
+ H +F G LP ++F FP ++DTK++ + + +TSL+
Sbjct: 363 VMHTIHQFCGPLPEELDDFKEVAMTVFPRLLDTKLMASTQPF---KEIIHNTSLAELHKQ 422
Query: 463 LCPHIAFSSQSNPAFKSGVRVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIG 522
L + P + L+S + ++ HEAGYDAF+TG F N +G
Sbjct: 423 L--------RQKPFRPPTTECP---EGLQSYDTSTEQLHEAGYDAFITGLCFISMANYLG 422
Query: 523 IDFALRSPSENLVDNENLQKHVNHLYL 546
F S ++ L+ N L+L
Sbjct: 483 -SFLTPPKSHISARSKLLEPFYNKLFL 422
BLAST of CmUC10G186550 vs. ExPASy Swiss-Prot
Match:
Q90ZA1 (Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 3.6e-31
Identity = 127/514 (24.71%), Postives = 211/514 (41.05%), Query Frame = 0
Query: 43 VTKLNFEAALSELRTHVRAADFVAVDLEMTGITSAPWRESLE--FDRFDIRYLKVKDSAE 102
+T+ NF+ L ++ + ADF+A+D E +GI+ P +L FD + RY K+K +
Sbjct: 3 ITRSNFKDTLPKVYKAIEEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYTKLKKHSM 62
Query: 103 KFAVVQFGVCPFRWDSAKNSFVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQF 162
+F + QFG+C F +D+ + ++ NF++FP+ + P +F+CQ++S++FLA F
Sbjct: 63 EFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPK-PFNRNSPDKKFVCQSSSIDFLANQGF 122
Query: 163 DFNACIREGISYLSRAHEDAAR-----KRLNFAYGDEMSDASSNVIRDKKRIGIADVLFK 222
DFN R GI YL++ E R +R MS S N + I F
Sbjct: 123 DFNKVFRNGIPYLNQEEERVLRDQYEDRRSQSNGASTMSYISPNSSKTPVSIPDEQKGFI 182
Query: 223 ERMKNRLHEWRDRLLSERNMEFQGQEGSNDYQRQ--FQTIFFKMRPALTLSDFTSHQIRL 282
+++ R+ ++ N+ E YQR+ +QT+ +K
Sbjct: 183 DKVVERVEDFLKNEQKSMNV-----EPCTGYQRKLIYQTLNWK----------------- 242
Query: 283 IRLKLSVSDIKYFSNSTFCYLFIKSYPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQL 342
YP E ++ KK +
Sbjct: 243 -------------------------YPRGIHVETVESEKK------------------ER 302
Query: 343 VVYVDSRDDKELLMQEVNSDQKEAAEMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTS 402
+ + D++E E KE E + A+GF +I ++S KL++GHN L
Sbjct: 303 YIVISKVDEEERKRMEQQKQAKEREE--LDDAVGFSRIIQAISSSGKLVVGHNMLL---- 362
Query: 403 VFGPDIAHIHTKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLS 462
D+ H +F LP EF FP ++DTK++ + N + S L
Sbjct: 363 ----DVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMASTNPFKEIIYNTSLAELE 422
Query: 463 SAFGLLCPHIAFSSQSNPAFKSGVRVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQA 522
FK +V+ + +S N S HEAGYDA++TG F
Sbjct: 423 KRL------------KEAPFKP-PKVD-SAEGFQSYNTASEQLHEAGYDAYITGLCFISM 423
Query: 523 CNLIGIDFALRSPSENLVD--NENLQKHVNHLYL 546
N +G + SP ++ V ++ ++ N L+L
Sbjct: 483 ANYLG---SFLSPPKDYVSCRSKIVRPFFNKLFL 423
BLAST of CmUC10G186550 vs. ExPASy Swiss-Prot
Match:
O95453 (Poly(A)-specific ribonuclease PARN OS=Homo sapiens OX=9606 GN=PARN PE=1 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 4.0e-30
Identity = 125/491 (25.46%), Postives = 206/491 (41.96%), Query Frame = 0
Query: 43 VTKLNFEAALSELRTHVRAADFVAVDLEMTGITSAPWRESLE--FDRFDIRYLKVKDSAE 102
+ + NF++ L ++ + ADF A+D E +GI+ P +L FD + RY K+K +
Sbjct: 3 IIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHSM 62
Query: 103 KFAVVQFGVCPFRWDSAKNSFVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQF 162
F + QFG+C F++D + ++ NF+VFP+ P +F+CQ++S++FLA F
Sbjct: 63 DFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPK-PFNRSSPDVKFVCQSSSIDFLASQGF 122
Query: 163 DFNACIREGISYLSRAHEDAARKRLNFAYGDEMSDA--SSNVIRDKKRIGIADVLFKERM 222
DFN R GI YL++ E ++L Y ++ S A + + V E
Sbjct: 123 DFNKVFRNGIPYLNQEEE----RQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQ 182
Query: 223 KNRLHEWRDRLLSERNMEFQGQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKL 282
K ++ D+++ + Q +E N L L T Q +LI L
Sbjct: 183 K----KFIDQVVEKIEDLLQSEENKN----------------LDLEPCTGFQRKLIYQTL 242
Query: 283 SVSDIKYFSNSTFCYLFIKSYPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVD 342
S YP E ++ KK + + +
Sbjct: 243 S-----------------WKYPKGIHVETLETEKK------------------ERYIVIS 302
Query: 343 SRDDKELLMQEVNSDQKEAAEMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPD 402
D++E +E KE E + A+GF VI +A+ KL+IGHN L D
Sbjct: 303 KVDEEERKRREQQKHAKEQEE--LNDAVGFSRVIHAIANSGKLVIGHNMLL--------D 362
Query: 403 IAHIHTKFIGSLPSTAEEFVSSIGKHFPYIMDTKI---------LLNGNSI--LQRRMKK 462
+ H +F LP+ EF FP ++DTK+ ++N S+ L++R+K+
Sbjct: 363 VMHTVHQFYCPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKE 398
Query: 463 SSTSLSSAFGLLCPHIAFSSQSNPAFKSGVRVEVQVDDLRSSNWNSGDKHEAGYDAFMTG 519
+ + P S++ P++ + S HEAGYDA++TG
Sbjct: 423 TPFN---------PPKVESAEGFPSYDTA----------------SEQLHEAGYDAYITG 398
BLAST of CmUC10G186550 vs. ExPASy TrEMBL
Match:
A0A6J1EWU6 (poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438751 PE=3 SV=1)
HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 628/753 (83.40%), Postives = 664/753 (88.18%), Query Frame = 0
Query: 1 MDPSRSLSALPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVR 60
M+ SR L A RLLCFIRTA YSSAAVT P ASNSSFPLKNVTK NFEA LSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTTPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 AADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
AADFVA+DLEMTGITSAPWRES EFDRFD+RYLKVKDSAEKFAVVQFGVCPFRWDSAKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDA 180
FVAHPHNFFVFPRHEI VDGPSSEFLCQTTS+EFLAKYQFDFNACI EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEILVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
ARKRLNFA+GDE SDASSNV IRD+KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240
Query: 241 GQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKS 300
GQEGSNDYQRQF+TIFFKMRPALTLSDFTSHQ +LI+L
Sbjct: 241 GQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQL---------------------- 300
Query: 301 YPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAA 360
VIKKHFEDLCFVVV+DGD NLQQLVVYVDSRDDKELLMQEVNSD++EAA
Sbjct: 301 -----------VIKKHFEDLCFVVVDDGDANLQQLVVYVDSRDDKELLMQEVNSDRQEAA 360
Query: 361 EMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFV 420
EMKIQSAIGFRHVIDLL+SEKKLIIGHNCFL DIAHIH KFIGSLPSTAEEFV
Sbjct: 361 EMKIQSAIGFRHVIDLLSSEKKLIIGHNCFL--------DIAHIHKKFIGSLPSTAEEFV 420
Query: 421 SSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAFKSGVR 480
SSIGKHFP+IMDTKILLNGN ILQ+RMKKSSTSLSSAF LLCPHIAFSSQSNPAF SGV+
Sbjct: 421 SSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFALLCPHIAFSSQSNPAFSSGVQ 480
Query: 481 VEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQK 540
VEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GIDF L PSENL DNE LQK
Sbjct: 481 VEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGIDFVL--PSENLADNEKLQK 540
Query: 541 HVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIK 600
H+NHLYLSWASGDIIDLSTGNRMTE LRSNRSKKHQAKISFENIVLIWGFP +LNAR+IK
Sbjct: 541 HINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKISFENIVLIWGFPANLNARKIK 600
Query: 601 ECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLF 660
ECISKVFGL N+VSVYH+DESAVFVQFAKPEMVSEFLDLK+NLERHDDPISVLHPLT+LF
Sbjct: 601 ECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKKNLERHDDPISVLHPLTELF 660
Query: 661 EARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEA------ 720
A+ T+AAGYEAYK+ICSSP+ K+LFADQAEAVGINQKT IK E+VKSQMHEA
Sbjct: 661 GAKGTNAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTTSIKPESVKSQMHEAANNSLT 710
Query: 721 VEMLNETTEIQGMEMGSNDLSSTNYHSLRSSSM 746
+MLNETTE+QGME+G+NDL +TNYH LRSSSM
Sbjct: 721 ADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of CmUC10G186550 vs. ExPASy TrEMBL
Match:
A0A6J1L1G4 (poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111500250 PE=3 SV=1)
HSP 1 Score: 1197.6 bits (3097), Expect = 0.0e+00
Identity = 620/753 (82.34%), Postives = 659/753 (87.52%), Query Frame = 0
Query: 1 MDPSRSLSALPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVR 60
M+ SR L A RLLCFIRTA YSSAAVTAP ASNSSFPLKNVTK NFEA LSELR+HVR
Sbjct: 1 MNLSRPLWAPTRLLCFIRTATYSSAAVTAPATASNSSFPLKNVTKSNFEAVLSELRSHVR 60
Query: 61 AADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
AADFVA+DLEMTGITSAPWRES EFDRFD+RYLKVKDSAEKFAVVQFGVCPFRWDSAKNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
Query: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDA 180
FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTS+EFLAKYQFDFNACI EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHEDA 180
Query: 181 ARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
ARKRLNFA+GDE DASSNV IR++KRIGIADVLFKERMKNRLHEWRDRLLSERNME Q
Sbjct: 181 ARKRLNFAHGDETLDASSNVTNIRNQKRIGIADVLFKERMKNRLHEWRDRLLSERNMECQ 240
Query: 241 GQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKS 300
GQEG+NDYQRQF+TIFFKMRPALTLSDFTSHQ +LI+L
Sbjct: 241 GQEGANDYQRQFETIFFKMRPALTLSDFTSHQTKLIQL---------------------- 300
Query: 301 YPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAA 360
VIKKHFEDLCFVVV+DG+ NLQQLVVYVDSRDDKELLMQEVN D++EAA
Sbjct: 301 -----------VIKKHFEDLCFVVVDDGNANLQQLVVYVDSRDDKELLMQEVNCDRQEAA 360
Query: 361 EMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFV 420
EMKIQSAIGFRHVIDLL+SEKKLIIGHNCFL DIAHIH KFIGSLP TAEEFV
Sbjct: 361 EMKIQSAIGFRHVIDLLSSEKKLIIGHNCFL--------DIAHIHKKFIGSLPLTAEEFV 420
Query: 421 SSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAFKSGVR 480
SSIGK FP IMDTKILLNGN ILQ+RMKKSSTSLSSAF LLCPHIAFSSQSNPAF SGV+
Sbjct: 421 SSIGKRFPLIMDTKILLNGNGILQQRMKKSSTSLSSAFALLCPHIAFSSQSNPAFNSGVQ 480
Query: 481 VEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQK 540
VEVQVDDL SSNWNSGDKHEAGYDAFMTGCVFAQACNL+GIDF L PSENL DNE LQK
Sbjct: 481 VEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMGIDFVL--PSENLADNEKLQK 540
Query: 541 HVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIK 600
H+NHLYLSWASGDIIDLSTGNRMTE LRSNRSK+HQ KISFENIVLIWGFP +LNAR+IK
Sbjct: 541 HINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKRHQVKISFENIVLIWGFPANLNARKIK 600
Query: 601 ECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLF 660
ECISKVFGL N+VSVYH+DESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLT+LF
Sbjct: 601 ECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTELF 660
Query: 661 EARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEA------ 720
A++THAAGYEAYK+ICSSP+ K+LFADQAEAVGINQKT IK ++VK QMHEA
Sbjct: 661 GAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTMSIKLKSVKGQMHEAANSSLT 710
Query: 721 VEMLNETTEIQGMEMGSNDLSSTNYHSLRSSSM 746
+ML ETTE+QGME+G+NDL +TNYH LRSSSM
Sbjct: 721 ADMLKETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of CmUC10G186550 vs. ExPASy TrEMBL
Match:
A0A0A0L4V6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G048430 PE=3 SV=1)
HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 588/748 (78.61%), Postives = 641/748 (85.70%), Query Frame = 0
Query: 1 MDPSRSLSALP-RLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHV 60
M+PS L AL RL CFIRT YSSAAVTAP+ ASNSSFPLKNVTK NFEAALSELR+HV
Sbjct: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
Query: 61 RAADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKN 120
RAADFVA+DLEMTGITSAPWR+ LEFDRFD+RYL VKDSAEKFAV+QFG+CPFRWDSAKN
Sbjct: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
Query: 121 SFVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHED 180
SFVAHPHNFF+FPRHEI+VDGPSSEFLCQTTSMEFLAKYQFDFNACI EGISYLSRAHED
Sbjct: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFAYGDEM DASSNV + DKKR+GI DVLFKERMKNRLHEWRDRLLSERNMEF
Sbjct: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
Query: 241 QGQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIK 300
QGQEGSND++RQFQTIFFKMRPALTLSDFTSHQI+LI+L
Sbjct: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQL--------------------- 300
Query: 301 SYPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEA 360
VIKKHFEDLCFVVVNDG+ +LQQLVV+VDSRDDKELLMQEVN DQKE
Sbjct: 301 ------------VIKKHFEDLCFVVVNDGNADLQQLVVFVDSRDDKELLMQEVNRDQKEV 360
Query: 361 AEMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEF 420
EMKIQSAIGFRHVIDLL+SEKKLI+GHNCFL D+ HIH KFIGSLPST EEF
Sbjct: 361 NEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFL--------DMLHIHRKFIGSLPSTTEEF 420
Query: 421 VSSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAFKSGV 480
VSS+GKHFPYIMDTKILLNGN+IL RRM KS+TSLSSAFGLLCPHIAFSSQ A+ SGV
Sbjct: 421 VSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGLLCPHIAFSSQRVSAWNSGV 480
Query: 481 RVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQ 540
+VEVQVDDLRSS WNSGD HEAGYDAFMTGCVFAQAC+L+GIDF RS SENL+ NE LQ
Sbjct: 481 QVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMGIDFVDRSTSENLLGNEILQ 540
Query: 541 KHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREI 600
KH+N LYLSWA GDIIDLSTGN++TES ++KH+AK+SF+NIVLIWGFPT+L AR+I
Sbjct: 541 KHINRLYLSWARGDIIDLSTGNQVTESF---TTRKHRAKVSFQNIVLIWGFPTNLTARKI 600
Query: 601 KECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKL 660
K CISK FG TNV SV HLDESAVFVQF KPEMVSEFLDLKE LE+ DDP+SVLHPLT+L
Sbjct: 601 KACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKLEKRDDPLSVLHPLTEL 660
Query: 661 FEARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEAVEMLN 720
F+ RTTHAAGYEAYKKICSSP+SK LF+DQAEAVGIN+KT IKSE +S+MH+AV
Sbjct: 661 FDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIKSEEKRSRMHQAV---- 700
Query: 721 ETTEIQGMEMGSNDLSSTNYHSLRSSSM 746
ETTEIQG E+ +NDLS+TNYHSLRSSSM
Sbjct: 721 ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
BLAST of CmUC10G186550 vs. ExPASy TrEMBL
Match:
A0A6J1CSK6 (poly(A)-specific ribonuclease PARN isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013834 PE=3 SV=1)
HSP 1 Score: 1131.7 bits (2926), Expect = 0.0e+00
Identity = 593/754 (78.65%), Postives = 639/754 (84.75%), Query Frame = 0
Query: 1 MDPSRSLSALPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVR 60
M R L ALPRLLCFIRTA YSSAAVTAP A N SFPLKNVTK NFEA ++ELR HVR
Sbjct: 1 MKTPRPLWALPRLLCFIRTATYSSAAVTAPATAVNPSFPLKNVTKSNFEAVVAELRNHVR 60
Query: 61 AADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
AADFVA+DLEMTGITSAPWRES EFDRFD+RYLKVKDSAEKFAVVQFGVCPFRWDS KNS
Sbjct: 61 AADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSTKNS 120
Query: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDA 180
F+AHPHNFFVFPR EIQVDGPS EFLCQTTS+EFLAKYQFDFNACI EGISYLSRA E A
Sbjct: 121 FIAHPHNFFVFPRQEIQVDGPSPEFLCQTTSVEFLAKYQFDFNACIHEGISYLSRAQEYA 180
Query: 181 ARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
ARKRL+FAYGDEMSDASSNV I+D+KR+ I+DVLFKERMKNRLHEWRDRLLSERN+EFQ
Sbjct: 181 ARKRLDFAYGDEMSDASSNVTDIKDEKRVSISDVLFKERMKNRLHEWRDRLLSERNVEFQ 240
Query: 241 GQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKS 300
GQE S YQR FQTIFFKMRPAL L+DFTSHQ RLI+L
Sbjct: 241 GQECS--YQRPFQTIFFKMRPALCLNDFTSHQTRLIQL---------------------- 300
Query: 301 YPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAA 360
VIKKHF DLC+V V++G+ NLQQLVVYVD RDDKELLM+EVNS++++AA
Sbjct: 301 -----------VIKKHFTDLCYVHVDNGNANLQQLVVYVDYRDDKELLMKEVNSERQKAA 360
Query: 361 EMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFV 420
EMKIQSAIGFRHVIDLL+ EKKLI+GHNCFL DIAHIH+KFIGSLPSTAEEFV
Sbjct: 361 EMKIQSAIGFRHVIDLLSLEKKLIVGHNCFL--------DIAHIHSKFIGSLPSTAEEFV 420
Query: 421 SSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFS--SQSNPAFKSG 480
SSIGKHFPYIMDTKILLNGNSILQ+RMKKSSTSLSSA G+LCPHIAFS S+S+PAF SG
Sbjct: 421 SSIGKHFPYIMDTKILLNGNSILQQRMKKSSTSLSSALGVLCPHIAFSSHSKSSPAFNSG 480
Query: 481 VRVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENL 540
V+VEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDF SPSE L DNE
Sbjct: 481 VQVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFVRSSPSETLADNEKF 540
Query: 541 QKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNARE 600
Q HVNHLYLSW SGDIIDLSTGNR TESLRSNRSKKHQAKISFENIVLIWGFPT++NAR+
Sbjct: 541 QNHVNHLYLSWXSGDIIDLSTGNRRTESLRSNRSKKHQAKISFENIVLIWGFPTNINARK 600
Query: 601 IKECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTK 660
IK+CISKVFG TNVVSVYHLDESAVFVQFAK EMVSEFL LKENLERH+DP+SVLHPL +
Sbjct: 601 IKQCISKVFGPTNVVSVYHLDESAVFVQFAKLEMVSEFLMLKENLERHNDPVSVLHPLYE 660
Query: 661 LFEARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEA---- 720
LFEAR THAA YEAYK+ICSSPI KLLFADQAEAVG N+KT IK E VKSQMHEA
Sbjct: 661 LFEARNTHAACYEAYKEICSSPICKLLFADQAEAVGFNRKTKSIKPETVKSQMHEAANGL 711
Query: 721 -VEMLNETTEIQGMEMGSNDLSSTNYHSLRSSSM 746
+ML+ TEIQ E+G+ND+S TNY+ L SSM
Sbjct: 721 TADMLDGNTEIQETEIGANDISCTNYNVLNLSSM 711
BLAST of CmUC10G186550 vs. ExPASy TrEMBL
Match:
A0A5D3CQS8 (Poly(A)-specific ribonuclease PARN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00310 PE=3 SV=1)
HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 585/747 (78.31%), Postives = 638/747 (85.41%), Query Frame = 0
Query: 1 MDPSRSLSALPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVR 60
M PS L A RL CFIRT YSSAAVTAP ASNSSFPLKNVTK NFEAALSELR+HVR
Sbjct: 1 MHPSHPLWA-RRLFCFIRTTNYSSAAVTAPATASNSSFPLKNVTKSNFEAALSELRSHVR 60
Query: 61 AADFVAVDLEMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNS 120
AADFVAVDLEMTGITSAPWR+ LEFDRFD+RYL VKDSAEKFAVVQFGVCPFRWDSAK S
Sbjct: 61 AADFVAVDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVVQFGVCPFRWDSAKKS 120
Query: 121 FVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDA 180
FVAHPHNFF+FPRHEI+VDGPSSEFLC+TTS+EFLAKYQFDFNACI EGISYLSRAHEDA
Sbjct: 121 FVAHPHNFFIFPRHEIEVDGPSSEFLCRTTSLEFLAKYQFDFNACIYEGISYLSRAHEDA 180
Query: 181 ARKRLNFAYGDEMSDASSNV--IRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQ 240
ARKRLNFAYGDEM DASSNV +RDKKR+GIADVLF+ERMKNRLHEWRDRLLSERNMEFQ
Sbjct: 181 ARKRLNFAYGDEMLDASSNVTNVRDKKRVGIADVLFRERMKNRLHEWRDRLLSERNMEFQ 240
Query: 241 GQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKS 300
GQEGSND++RQFQTIFFK RPALTLSDFTSHQI+LI+L
Sbjct: 241 GQEGSNDHKRQFQTIFFKTRPALTLSDFTSHQIKLIQL---------------------- 300
Query: 301 YPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAA 360
VIKKHFEDLCFVVVNDG+ +LQQLVVYVDSRDDKELLMQEVN DQ +AA
Sbjct: 301 -----------VIKKHFEDLCFVVVNDGNADLQQLVVYVDSRDDKELLMQEVNRDQNKAA 360
Query: 361 EMKIQSAIGFRHVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFV 420
E KIQSAIGFRHVIDLL+SEKKLI+GHNCFL D+ HIH KFIGSLPSTAEEFV
Sbjct: 361 ETKIQSAIGFRHVIDLLSSEKKLIVGHNCFL--------DMLHIHRKFIGSLPSTAEEFV 420
Query: 421 SSIGKHFPYIMDTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAFKSGVR 480
SS GKHFPY+MDTKILLN N IL+RRM KS+TSLSSAFG LCPHIAFSS A GV+
Sbjct: 421 SSFGKHFPYVMDTKILLNDNYILRRRMNKSNTSLSSAFGSLCPHIAFSSLRVNALNDGVQ 480
Query: 481 VEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQK 540
VEVQVDDLRSS WNSGDKHEAGYDAFMTGCVFAQACNL+GIDF S S+NLVDNE LQK
Sbjct: 481 VEVQVDDLRSSKWNSGDKHEAGYDAFMTGCVFAQACNLMGIDFVDCSTSKNLVDNEILQK 540
Query: 541 HVNHLYLSWASGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIK 600
H+N LYL+WASGDIIDLSTGN++TES +++KH+ ++SFENIVLIWGF T+L AR+IK
Sbjct: 541 HINRLYLNWASGDIIDLSTGNQVTESF---KTRKHRVRVSFENIVLIWGFSTNLTARKIK 600
Query: 601 ECISKVFGLTNVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLF 660
CISKVFG NV SV HLDESAVFVQF KPEMVSEFL+LKE LE+ DDPISVLHPLT+LF
Sbjct: 601 ACISKVFGQANVSSVNHLDESAVFVQFTKPEMVSEFLNLKEKLEKRDDPISVLHPLTELF 660
Query: 661 EARTTHAAGYEAYKKICSSPISKLLFADQAEAVGINQKTALIKSEAVKSQMHEAVEMLNE 720
+AR THAAGYEAYKKICSSP+SKLLF+DQAEAVGIN+KT LIKSEA +S++ +AV+ML+E
Sbjct: 661 DARATHAAGYEAYKKICSSPMSKLLFSDQAEAVGINRKTMLIKSEAKRSKIDQAVDMLDE 702
Query: 721 TTEIQGMEMGSNDLSSTNYHSLRSSSM 746
TTEIQG E +N+LSSTNY SLRSSSM
Sbjct: 721 TTEIQGTEGEANNLSSTNYQSLRSSSM 702
BLAST of CmUC10G186550 vs. TAIR 10
Match:
AT1G55870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 734.2 bits (1894), Expect = 1.1e-211
Identity = 379/689 (55.01%), Postives = 478/689 (69.38%), Query Frame = 0
Query: 10 LPRLLCFIRTAAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVRAADFVAVDL 69
L L+C ++A + T+ ++ ++FPLK+VT+ NFE L++LR+ V+AADFVA+DL
Sbjct: 9 LRSLVCSFSSSA-AETVTTSTAASATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDL 68
Query: 70 EMTGITSAPWRESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNSFVAHPHNFF 129
EMTG+TSAPWR+SLEFDR+D+RYLKVKDSAEKFAVVQFGVCPFRWDS SFV++PHNFF
Sbjct: 69 EMTGVTSAPWRDSLEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFF 128
Query: 130 VFPRHEIQVDGPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDAARKRLNFAY 189
VFPR E+ D P+ EFLCQTTSM+FLAKYQFDFN CI EGISYLSR E+ A KRL +
Sbjct: 129 VFPRQELTFDPPAHEFLCQTTSMDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLH 188
Query: 190 GDEMSDASSNVIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQGQEGSNDYQRQ 249
G++ D SS + K + +ADVLF RM+ L+EWR LL N + SN +
Sbjct: 189 GEDGID-SSGETEELKLVRLADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQS 248
Query: 250 FQTIFFKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKSYPCLAACEHMQ 309
+T+F MRPAL+L FTSHQ+R++
Sbjct: 249 METVFHHMRPALSLKGFTSHQLRVLN---------------------------------S 308
Query: 310 VIKKHFEDLCFVVVNDGDDNLQQLVVYVDSRDDKELLMQEVNSDQKEAAEMKIQSAIGFR 369
V++KHF DL ++ ND + + +VVY DS DKE LM+E ++K AE KIQSAIGFR
Sbjct: 309 VLRKHFGDLVYIHSNDKSSSSRDIVVYTDSDSDKENLMKEAKDERKRLAERKIQSAIGFR 368
Query: 370 HVIDLLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFVSSIGKHFPYIM 429
VIDLLASEKKLI+GHNCFL DIAH+++KF+G LPSTAE+FV+SI HFPYI+
Sbjct: 369 QVIDLLASEKKLIVGHNCFL--------DIAHVYSKFVGPLPSTAEKFVASINSHFPYIV 428
Query: 430 DTKILLNGNSILQRRMKKSSTSLSSAFGLLCPHIAFSSQSNPAF-KSGVRVEVQVDDLRS 489
DTKILLN N +L +RMKKSSTSLSSAF LCP I FSS+S+ +F + V ++V++D++R
Sbjct: 429 DTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRC 488
Query: 490 SNWNSGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQKHVNHLYLSWA 549
SNWN+G KHEAGYDAFMTGC+FAQACN +G DF S ++ NE L+K++N LYLSW
Sbjct: 489 SNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWT 548
Query: 550 SGDIIDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIKECISKVFGLT 609
GDIIDL TG+ SN +K +ENIVLIW FP L AR IKECI K FG
Sbjct: 549 RGDIIDLRTGH-------SNADNWRVSKFKYENIVLIWNFPRKLKARGIKECICKAFGSA 608
Query: 610 NVVSVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLFEARTTHAAGY 669
+V SVYH+D+SAVFV F E+V +FL LK LE D P+SVLHPL+K+ E T AA Y
Sbjct: 609 SVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAADY 647
Query: 670 EAYKKICSSPISKLLFADQAEAVGINQKT 698
EAYK+ICSS +S+++F+DQAE VG+ +T
Sbjct: 669 EAYKEICSSHVSEVMFSDQAETVGVKSRT 647
BLAST of CmUC10G186550 vs. TAIR 10
Match:
AT1G55870.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 542.3 bits (1396), Expect = 5.9e-154
Identity = 287/547 (52.47%), Postives = 362/547 (66.18%), Query Frame = 0
Query: 152 MEFLAKYQFDFNACIREGISYLSRAHEDAARKRLNFAYGDEMSDASSNVIRDKKRIGIAD 211
M+FLAKYQFDFN CI EGISYLSR E+ A KRL +G++ D SS + K + +AD
Sbjct: 1 MDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGID-SSGETEELKLVRLAD 60
Query: 212 VLFKERMKNRLHEWRDRLLSERNMEFQGQEGSNDYQRQFQTIFFKMRPALTLSDFTSHQI 271
VLF RM+ L+EWR LL N + SN + +T+F MRPAL+L FTSHQ+
Sbjct: 61 VLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQL 120
Query: 272 RLIRLKLSVSDIKYFSNSTFCYLFIKSYPCLAACEHMQVIKKHFEDLCFVVVNDGDDNLQ 331
R++ V++KHF DL ++ ND + +
Sbjct: 121 RVLN---------------------------------SVLRKHFGDLVYIHSNDKSSSSR 180
Query: 332 QLVVYVDSRDDKELLMQEVNSDQKEAAEMKIQSAIGFRHVIDLLASEKKLIIGHNCFLAD 391
+VVY DS DKE LM+E ++K AE KIQSAIGFR VIDLLASEKKLI+GHNCFL
Sbjct: 181 DIVVYTDSDSDKENLMKEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLIVGHNCFL-- 240
Query: 392 TSVFGPDIAHIHTKFIGSLPSTAEEFVSSIGKHFPYIMDTKILLNGNSILQRRMKKSSTS 451
DIAH+++KF+G LPSTAE+FV+SI HFPYI+DTKILLN N +L +RMKKSSTS
Sbjct: 241 ------DIAHVYSKFVGPLPSTAEKFVASINSHFPYIVDTKILLNVNPMLHQRMKKSSTS 300
Query: 452 LSSAFGLLCPHIAFSSQSNPAF-KSGVRVEVQVDDLRSSNWNSGDKHEAGYDAFMTGCVF 511
LSSAF LCP I FSS+S+ +F + V ++V++D++R SNWN+G KHEAGYDAFMTGC+F
Sbjct: 301 LSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCSNWNAGGKHEAGYDAFMTGCIF 360
Query: 512 AQACNLIGIDFALRSPSENLVDNENLQKHVNHLYLSWASGDIIDLSTGNRMTESLRSNRS 571
AQACN +G DF S ++ NE L+K++N LYLSW GDIIDL TG+ SN
Sbjct: 361 AQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTRGDIIDLRTGH-------SNAD 420
Query: 572 KKHQAKISFENIVLIWGFPTHLNAREIKECISKVFGLTNVVSVYHLDESAVFVQFAKPEM 631
+K +ENIVLIW FP L AR IKECI K FG +V SVYH+D+SAVFV F E+
Sbjct: 421 NWRVSKFKYENIVLIWNFPRKLKARGIKECICKAFGSASVTSVYHVDDSAVFVLFKNSEL 480
Query: 632 VSEFLDLKENLERHDDPISVLHPLTKLFEARTTHAAGYEAYKKICSSPISKLLFADQAEA 691
V +FL LK LE D P+SVLHPL+K+ E T AA YEAYK+ICSS +S+++F+DQAE
Sbjct: 481 VWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAADYEAYKEICSSHVSEVMFSDQAET 498
Query: 692 VGINQKT 698
VG+ +T
Sbjct: 541 VGVKSRT 498
BLAST of CmUC10G186550 vs. TAIR 10
Match:
AT3G25430.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 200.7 bits (509), Expect = 4.2e-51
Identity = 166/664 (25.00%), Postives = 293/664 (44.13%), Query Frame = 0
Query: 20 AAYSSAAVTAPTIASNSSFPLKNVTKLNFEAALSELRTHVRAADFVAVDLEMTGITSAPW 79
++ S+ A T+ + + +K V K NF L E+RT + ++DF+A+ L+ TG +A W
Sbjct: 7 SSISATAGNTKTL-NQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAW 66
Query: 80 RESLEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSAKNSFVAHPHNFFVFPRHEIQVD 139
D YLK K +AE++ ++QF +CPF +K HP+NF +FPR E++
Sbjct: 67 HRVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSK--LTVHPYNFHLFPRDELKCG 126
Query: 140 GPSSEFLCQTTSMEFLAKYQFDFNACIREGISYLSRAHEDAARKRLNFAYGDEMSDASSN 199
PS F CQ + + +A+ FDFN CI EGISYLSRA E A++ + E + +
Sbjct: 127 MPSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASK------FLSENPILADS 186
Query: 200 VIRDKKRIGIADVLFKERMKNRLHEWRDRLLSERNMEFQGQEGSNDYQRQFQTIF----- 259
V +AD +F R+++R+ WR + + + G +D + +
Sbjct: 187 VTVSSSPATVADTVFVGRIRSRVKNWRQSCIDSGS-----KTGDDDLVSSLRRLVLGSEQ 246
Query: 260 FKMRPALTLSDFTSHQIRLIRLKLSVSDIKYFSNSTFCYLFIKSYPCLAACEHMQVIKKH 319
+ R LT+ + Q++LI ++++ +
Sbjct: 247 YGSRLCLTIDVCSERQVQLI---------------------------------LEMLTEF 306
Query: 320 FEDLCFVVVNDGDDNLQQL-VVYVDSRDDKELLMQEVNSDQKEAAEMKIQSAIGFRHVID 379
+D+ ++V Q + V++ S++DK+L +E+ +KE + + GFR V+D
Sbjct: 307 SDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKDLEKE----ENRRVRGFREVVD 366
Query: 380 LLASEKKLIIGHNCFLADTSVFGPDIAHIHTKFIGSLPSTAEEFVSSIGKHFPYIMDTKI 439
++S +K ++ N + D IH KF+G LPS ++F SS+ FP ++D
Sbjct: 367 FISSSQKPVVSQN--------YLSDFTSIHAKFLGPLPSNVDDFSSSLSSAFPNVVDLSQ 426
Query: 440 LLNGNSILQRRMKKSSTSLSSAFGLLCP-HIAFSSQSNPAFKSGVRVEVQVDDLRSSNWN 499
+ S L + ++SS P + ++Q P V++D+ S+
Sbjct: 427 FMKEISPLS-NISNLPAAMSSLNRFFAPVDVEVANQGCP---------VKLDEGHQSH-- 486
Query: 500 SGDKHEAGYDAFMTGCVFAQACNLIGIDFALRSPSENLVDNENLQKHVNHLYLSWASGDI 559
G +A M +FA+ C + +S + NE+ Q S +
Sbjct: 487 -------GQNAVMISQLFAKLCTI------QKSDLSTIQSNEDFQ-----ALASDEHANS 546
Query: 560 IDLSTGNRMTESLRSNRSKKHQAKISFENIVLIWGFPTHLNAREIKECISKVFGL-TNVV 619
+ + N E+++ K+ ++S EN+V IWG + A ++K + K +
Sbjct: 547 VTSCSKNAGDENVKV--WSKNSRRVSSENLVFIWGLGKKMTAAKLKNVLQKSHPVFAREF 572
Query: 620 SVYHLDESAVFVQFAKPEMVSEFLDLKENLERHDDPISVLHPLTKLFEARTTHAAGYEAY 676
V ++D S+ + F + FL N E+ D + + A AGYE Y
Sbjct: 607 DVKYIDRSSAILVFWESGPSETFLSAVNNEEQLDGSL-------REMVAEGLRGAGYETY 572
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7015576.1 | 0.0e+00 | 83.27 | Poly(A)-specific ribonuclease PARN [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022932379.1 | 0.0e+00 | 83.40 | poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita moschata] | [more] |
XP_023553318.1 | 0.0e+00 | 83.27 | poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
KAG6577517.1 | 0.0e+00 | 82.87 | Poly(A)-specific ribonuclease PARN, partial [Cucurbita argyrosperma subsp. soror... | [more] |
XP_023007721.1 | 0.0e+00 | 82.34 | poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9LG26 | 1.5e-210 | 55.01 | Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 ... | [more] |
Q8W4C3 | 5.9e-50 | 25.00 | Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g2... | [more] |
Q7ZU92 | 4.3e-32 | 25.25 | Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2 | [more] |
Q90ZA1 | 3.6e-31 | 24.71 | Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1 | [more] |
O95453 | 4.0e-30 | 25.46 | Poly(A)-specific ribonuclease PARN OS=Homo sapiens OX=9606 GN=PARN PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EWU6 | 0.0e+00 | 83.40 | poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita moschata OX=3662 GN=L... | [more] |
A0A6J1L1G4 | 0.0e+00 | 82.34 | poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC... | [more] |
A0A0A0L4V6 | 0.0e+00 | 78.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G048430 PE=3 SV=1 | [more] |
A0A6J1CSK6 | 0.0e+00 | 78.65 | poly(A)-specific ribonuclease PARN isoform X1 OS=Momordica charantia OX=3673 GN=... | [more] |
A0A5D3CQS8 | 0.0e+00 | 78.31 | Poly(A)-specific ribonuclease PARN OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
Match Name | E-value | Identity | Description | |
AT1G55870.1 | 1.1e-211 | 55.01 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
AT1G55870.2 | 5.9e-154 | 52.47 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
AT3G25430.1 | 4.2e-51 | 25.00 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |