CmUC10G186520 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAGACGAAATAAAAAGGCGTTGTCCGTTGTGTAATAAGCACGATTTGGCCGAAACAAAACTTTCTTCTTCTTCTTGTCTCTCTCGCTCGCTCCTCTCCTGCTTCTGGTGTGGCCATCCTCTTTCTTCCCTTCTTCGATTCTTCGTTTATTGGCAAACCAACTTTCTCGAATTCATGTCGGTATGTCATTCCTCTTCCTCCCATCCAATTCCTGTTTTTTCCCTTCTCGATTTATCGCGATCCCTTTTTTTTTTCTTGATTCGATTTACTTCCTCTGATGATTTTTTCTTTCCTCAATTGGGTTTTTTCTATATGTTGATCGTTGATTTTCCCATTCCATGATACCCCTTTTCTTTGATCCTCTTAGATTCACTGCTTTGATTGTTTCCCCCCTTTTGGGAGATTTGCTGATGTTTGTCATGGCTGGATTTTCTCCCTCATTGTTATAATTTTTGTACTCCTTCGTTCAATTCGAAGGATTTGTTCTTAATTTTTGTGAATCCTACGTTTCTCCTCTTGGTTGATTTGTTTCGAAATGTTTCCTCTTCACTCTGATCTTATATCATTTTTGTTTGTTTGAATTGAGTTTCCATTATCATGGTTCTTGGGTGATTTTCTTTTTTTTTTTTCTTTTTTTTTTTGTTAATGGAACTTGATCGGCCAAGTTTTGTACTTGACAGAGTTCTGATAAATAAAGGTTATTTCAAATTTTAATCAACTGTTAACAAACATTGGCAATTCTTTCCATTATCTTCTCATCTTTTTATCTCGCACGTTTTTCTTCTAATTTCTGATTTCTGCTATTAATCATGGATTATCTTGTTTTTAGCTCATTAATAGCAGAAAGAGCAGTTTCGTTCAACTTTTTACTTTCAAATCCATGATCTACATATTTTAGGAGAGTAAAGGTTCAAAAATTGAATCCTGATTTTCATTACAGTGTATGACTGGTTTAGATTAACACAACTATTACTTGTAGCATAGCAAGGAAGATACTTTTTTTGGGCTAAATTATAAATTTGGTTTATGAACTTTAGCTCTGTTTTGTCCTTTCAGCTTTTAAAGTTTTCTATATGGTCTTAAACTTTGGTCTATGCTTTTGTCTAATCCTTGCCATTGCATTATTTATAGAAACTGAATGGGCATGCTATCTAAGCATTCCTTTAATAGTGTTAATTGTTAATAGTAGGGACTAGATTGAAGCATAATCAAAGTTTAGAGACATAATTGTTTTAATGTTTAGAATCAAATATGCATTAAGCTTCAAGTATAGGGACTGAATGTATGTATTCTAACAGGAGAAGGGTCAGCCACTTCCGAAGTTTGGTGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCCGAATCACCTGGAAAGGCACCTCAGGCCAAAAATGTAGCAGATCCTGGCAAACCTCAGGCTGTAAGATGCTATAAATGCAATTTTATTCCTAGCCTTTTCTATCATGCCTGA GAAGACGAAATAAAAAGGCGTTGTCCGTTGTGTAATAAGCACGATTTGGCCGAAACAAAACTTTCTTCTTCTTCTTGTCTCTCTCGCTCGCTCCTCTCCTGCTTCTGGTGTGGCCATCCTCTTTCTTCCCTTCTTCGATTCTTCGTTTATTGGCAAACCAACTTTCTCGAATTCATGTCGGAGAAGGGTCAGCCACTTCCGAAGTTTGGTGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCCGAATCACCTGGAAAGGCACCTCAGGCCAAAAATGTAGCAGATCCTGGCAAACCTCAGGCTGTAAGATGCTATAAATGCAATTTTATTCCTAGCCTTTTCTATCATGCCTGA ATGTCGGAGAAGGGTCAGCCACTTCCGAAGTTTGGTGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCCGAATCACCTGGAAAGGCACCTCAGGCCAAAAATGTAGCAGATCCTGGCAAACCTCAGGCTGTAAGATGCTATAAATGCAATTTTATTCCTAGCCTTTTCTATCATGCCTGA MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKPQAVRCYKCNFIPSLFYHA Homology
BLAST of CmUC10G186520 vs. NCBI nr
Match: XP_008449047.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]) HSP 1 Score: 134.0 bits (336), Expect = 5.4e-28 Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0
BLAST of CmUC10G186520 vs. NCBI nr
Match: XP_004148258.1 (protein NOI4 [Cucumis sativus] >KGN56031.1 hypothetical protein Csa_009963 [Cucumis sativus]) HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27 Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0
BLAST of CmUC10G186520 vs. NCBI nr
Match: XP_038905925.1 (protein NOI4-like [Benincasa hispida]) HSP 1 Score: 130.6 bits (327), Expect = 6.0e-27 Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 0
BLAST of CmUC10G186520 vs. NCBI nr
Match: KAG7028294.1 (RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 128.3 bits (321), Expect = 3.0e-26 Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of CmUC10G186520 vs. NCBI nr
Match: KAA0065744.1 (RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK13768.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 3.0e-26 Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of CmUC10G186520 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of CmUC10G186520 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.9e-08 Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of CmUC10G186520 vs. ExPASy TrEMBL
Match: A0A1S3BL66 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103491035 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.6e-28 Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0
BLAST of CmUC10G186520 vs. ExPASy TrEMBL
Match: A0A0A0L7F7 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G047910 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 7.7e-28 Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0
BLAST of CmUC10G186520 vs. ExPASy TrEMBL
Match: A0A5D3CRF8 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00290 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26 Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of CmUC10G186520 vs. ExPASy TrEMBL
Match: A0A6J1GG65 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111453626 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.0e-24 Identity = 57/68 (83.82%), Postives = 61/68 (89.71%), Query Frame = 0
BLAST of CmUC10G186520 vs. ExPASy TrEMBL
Match: A0A059BWK0 (AvrRpt-cleavage domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F03683 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21 Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of CmUC10G186520 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 99.8 bits (247), Expect = 1.1e-21 Identity = 48/67 (71.64%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of CmUC10G186520 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 96.7 bits (239), Expect = 9.0e-21 Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of CmUC10G186520 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-20 Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0
BLAST of CmUC10G186520 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 84.3 bits (207), Expect = 4.6e-17 Identity = 37/47 (78.72%), Postives = 45/47 (95.74%), Query Frame = 0
BLAST of CmUC10G186520 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 72.0 bits (175), Expect = 2.4e-13 Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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