CmUC10G183300 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTTGTGAAGTTACAAAGCATCCAATTCTTCGCAGCTCCTCCAAAGGAGATTAGGAGTAGAAAGAAACAGAGGAGATTTATTAGATGTGGGATCGCAGAGGCATCTGGTGAGCCAGCTCCATTGGGGCAGAAAACAAAGTACAATGACGGGCCATTTGAGAAGGTTTTCATGACACTTTTTGCAAGGAAAATGGAGAAATTTGCAAATGCTAAGGAGCAAAGGAAGGAGAAAGTAGGATTATGGGATTTCCTTTATGATTATGAAAGGTTTGTTGATGTTTCAAAGAGAGTAATGCAAGGGAAGAATCGGATGCAACAGCAACTTATCGTTCGTGAGGTTCTCTTGTCTATGCTCCCTCCCGGTGCCCCGGCTCAGGTCAGCCTTTCTTGCAAAATCAAATTATTCCATGTGGTTGTTTTGCTCGTTACGGTTATGCATATATGTTTATTATGTCAATACGAGCATAGCTCAACTAAAATAAAACTTCTACTATCGAACTTAAGGTTAGATATTTGATTACTCCACCCCTATCTAAAGTGAATAAGGTAAAATTTCACGCATTGGAATGCGGGAATCTCAATAAGAGATCCTTTTGAAGTTTATAGAACATTAAGTTCGGAAGTTCAAATTCTGTAAAAGATAAAAATAATAGACCTTTGGTTGCTAATATATGTGTAGGTTAGCAAAAAAAAAAAAAGGAAAAAAAAAAACATATCTTAGGAATTATTTGCATCTTTCTCCGATCATCATGTGGACTGAAACAGAAACTGATGCTCGCAGTTCAGGAAATTGTTCCCACCAACAAAATGGAGTTGCGAATTCAATGCCTCACTAACAGTGCCATTCTTTCAATGGTTAGTCGGCCCTTCGGAGGTAATTTCATTTCATTAAATCTTCAAATGCCCTAATCTTTACCAATCCCTTGTGTTCTGTTTCACTTATTATCCTCTGTTTTCTGTTGATTTGAATGATTGCTTGAGTTTTCCAGTTGAACAATCAGTTTACACATGCTTTGAATTGAAACTGAACAACTAATGGTAGTGAGTGATTTGGAATTGTTTATATGCTACATTCTAGGTGGCATTTTGTTAAAAGTATTTGTGAAATTAGATTCACTATATTTCATCAGCTTAAGTTTTTGGGCTTATTGGTGCTTTTAACGCAGTATTAGAGCTTCTTGTGTGTAAGAGCATTCTCCCAATGATCTTTTTTTTCCCCTCTTGGTTTCTTAACAATGGCTGAATCATCTTCCTCATCTCTCATATCTATCCAACATTGATAGTACTAGAACATGAAGTCTTGTGTTCGTTCGAGGGCTATGCGTGAGAGTGTGTTAGAGTATTGGTATAGTTAAATTTACAATAACCCATCACCTTCTGCTTTTGGAATGATTGGTGGCTTAATGTGATAATTAGAGCTTCTTGCTTGAAAGAGCAGTTTCCATTTTTATTTTTATTTTTGTTTCTTTTGTTTCTTACTAATGGCTGAAGTATCTTCCTCAACCATCAAGGCCAACCTTGTTCTCATCAATTCATTCAACTTTGATAATAGTTTAACATAGTATCAAAACAAGAGGTCATGTATTCGAACTCTTGTATTGTCATTTTCTCACCAATTAATATTGATTTCAACTTGTTGGGCCTTCTAAATTTCTAAACCCACAAATGAAGGAGGTTTTGAAGTATTGATATATTTAAATTTACCGTAACCTATCAACTTAAGTTATTTGGTTGGTTGTTGATTTAACGAATAGACATAAATAGCAATGAAGAACAAAAGTAGTAAATTTTGAGAGTGAGTGAAATACATCAAACTCGTTTTTTAAGCAAATAAATGCATAAACTTATTTATTTTGAATATCCTTCTTGTATAAAGAATGATATATTTTTAATAATCCTTCCCTTGTCGTGTCCATGTCCAAGATTTTGAAAAACGATGTGTCACCATGTCCATGTCATTTTGTTCTATCCTGTGTGCATGATTGTGCTTCTTAGGAGGAATGGATAACCAATGATCAATTACTCCTTGCTTGACTATACAACCTTCTCAAACTCAAGGCTGCCACTCAAGTCCCTAATTGCAAGACATTAGAAAAACTACAGAAAAGAATATAGGAGTAATATAAATCTCAGAGATTCAAACAAAAACAACTAAGATGGAACTAATGAGCATGGAAAATGTGCAAGGTATATATTCACAATGCTTATCTAGATCTGCTGCTAGCACCATCTTTCCTATTGTATGTTGATATTTTATGACTAGGGAGCTCATCCAGTTTATACAGATTTGGTTTGTTTCTTTCTTGCCATTGAGGCATGTAAGTTTCTTTATACCTTTCTCAAATGAAGTTCACTTGTGATTCCCTGCTGTGAGCTAAAATGCAGAATGCCAAAACAAGTTCCATTTTAGGGTTTTAGTAACTATTCACCTGTCTTTCACATGCTTCAATGGTAAATTTGTAATGTGAGGGAAGAGACAACCTACGAAACAAAGAAAAATGACTCTAATGCCAAAAGTCAGAGGTAGAAAACTGTAGAATGAAAAGAAAGTCAAAACTTGAAGTTACCTCATATGGAGTTATAATAATGTATTTTTATAAAGAGTATGACCTGAAAATAGGAATAGGATGAGATGAGTTTTTCCTAATCCTGAACAAGTTATGATTAGATCTGATTGGCCATAGACTTATTTGAACCTAGATCCAATTTCAACCACAACATGAACCAAATTATCTTTTCTTGGAAGGTGTTTTGTTTAAGTGACCTTAGCCATATTGTAGTGTTATTGGGGTTGACCATTTGGAGGCTACGATGCAACAACCAGACATTAACTTTTTAGTGATTAAACTTGGTAACTTCCTTTGTGCTGATAGGTTTACTCATCAACTGCAACTCCTTAGGCCTTGTATGGTAACGATTTGTGCAATAGTTTGCATCTTTTTAAGTAAAAGAGTTGAATTCTTAGCCAAATTCCAAGAACAAAAATAAATTTTTAAAAACCACTTTAGGAAAAGTTGAAGTAAACTGTTTGGGACAAGCTAGCATTCATATAGTTGGTTTGAACCTGTGTTTTAATAACTCGTCCTTTTTAAATTCGTTTTCCGTCTAGTGGTGGGTGTCAAGATGAACTCCTTGTCAATTGTAGTCAGAATGTGATTCACTAGAGATCATCATAAGATTTGAACATCATCTCAAATTTTCATGCTACACTCTCTGGTTCCTTGCAAAGGTGAATATAGTGAATTGGCTTAATTTGCTGTAGTGTTATAAGTGCTTAGTTTGTTGTTAAATCCCCTATAAATAGAGGGTTTCCCTATCGGCCCGGACACTCCGAATCATAATAAGATCCTTGAAGAATTCTCTCCTTTTATCACTTAGGCTCTGCCAAAAAGTCATGAGTTGAATCAATTATTATGGTCTATTATGTGAATTTAATAAGTAGTTTTGACCTATAAAACCTTTCCATGTACATGAAAGAATCTTACATTTCCTCCTGTTTAGGTTGTGGAAGTGGAGGTAAATGGTATAAAGCAAAGAAGTGGAGTTCATATAAAGAAGTGCAGGTATAAACTCCATTTTCATTATGGGTTTCACAGCACTGTAAAAATTATTCTATCTATCTACAATTACATAATCATATATTCATTTTTTCTTTTTTTAATATACTTTTGAATCCCCATTATAGGTACCTAGAAAACAGTGGATGTGTAGGTATGTGTGTGAATATGTGCAAGATACCCACACAAGATTTCTTCACCAATGAATTTGGGCTCCCTCTCACCATGAATCCTAGTATGTATACTCTGATACTGTGTCTCCAATAAGGACATGTAGATTTTCAGTTAGGTTAAAAATTATTTTTGGTCTCTGGACTTTCATAGGAGTACTTTAATCCTTAAACTTTGTAACTAGTTAGTCTTTGCACTTTCAATTTTTAATTTTTTAGCGATTTAGTGCTTGTACTTTAGTATGTAACAATGTAGTTCATGTACTCTAAAGTTTGTATAATTTAGTTCCCTCGTAGAAATATGTGTTAGAGATTTAATAAACTGCTTAGGGACCCAATGTGTTTATAAGCTACGAAGTATAAGAAGTATAAATGGTTAAACAATAAAAAGTTAACATTTATTTTGATGAAATTTCTTATGGTAGGGATTAACTTGTTACAATTTTAAAAGTAGAGGGGATAAATTGTTACAAAATTCAAAGTACATGAATTAAATCGTTACAAATCAAAGTTGGATTAAATTGTTACTTCCATGTAAGCGTAGAGACCAAAAAAAAATTTTAACCTTTCTAGTTAATAATATTAGATTGGAAGGCCTTAGGCAGTGTCAAACATAACATGTTCTTGCTTTGTCACATTGTTAGATTTTGAAGACATGAGCTGTGAGATGATATATGGGCAAGTTCCACCACCATTTGAAGAGGATCCAGTATCCAACCAACCTTGCTACAAAGATATATGTAAGAGGAATTTGTTTGGCATTTTTTCAATAATCAACCCTATTTGATAAAGGTTACTCTTGGTTTTTAACTTATAAATGTGTCTTCTTGTGTGGTTGGCAGGTTCCATGGCAAATCCTAGTACTCCTTTATGTCCTAAATTACAAGCTTAA ATGGTGGTTGTGAAGTTACAAAGCATCCAATTCTTCGCAGCTCCTCCAAAGGAGATTAGGAGTAGAAAGAAACAGAGGAGATTTATTAGATGTGGGATCGCAGAGGCATCTGGTGAGCCAGCTCCATTGGGGCAGAAAACAAAGTACAATGACGGGCCATTTGAGAAGGTTTTCATGACACTTTTTGCAAGGAAAATGGAGAAATTTGCAAATGCTAAGGAGCAAAGGAAGGAGAAAGTAGGATTATGGGATTTCCTTTATGATTATGAAAGGTTTGTTGATGTTTCAAAGAGAGTAATGCAAGGGAAGAATCGGATGCAACAGCAACTTATCGTTCGTGAGGTTCTCTTGTCTATGCTCCCTCCCGGTGCCCCGGCTCAGTTCAGGAAATTGTTCCCACCAACAAAATGGAGTTGCGAATTCAATGCCTCACTAACAGTGCCATTCTTTCAATGGTTAGTCGGCCCTTCGGAGGTTGTGGAAGTGGAGGTAAATGGTATAAAGCAAAGAAGTGGAGTTCATATAAAGAAGTGCAGGTACCTAGAAAACAGTGGATGTGTAGGTATGTGTGTGAATATGTGCAAGATACCCACACAAGATTTCTTCACCAATGAATTTGGGCTCCCTCTCACCATGAATCCTAATTTTGAAGACATGAGCTGTGAGATGATATATGGGCAAGTTCCACCACCATTTGAAGAGGATCCAGTATCCAACCAACCTTGCTACAAAGATATATGTTCCATGGCAAATCCTAGTACTCCTTTATGTCCTAAATTACAAGCTTAA ATGGTGGTTGTGAAGTTACAAAGCATCCAATTCTTCGCAGCTCCTCCAAAGGAGATTAGGAGTAGAAAGAAACAGAGGAGATTTATTAGATGTGGGATCGCAGAGGCATCTGGTGAGCCAGCTCCATTGGGGCAGAAAACAAAGTACAATGACGGGCCATTTGAGAAGGTTTTCATGACACTTTTTGCAAGGAAAATGGAGAAATTTGCAAATGCTAAGGAGCAAAGGAAGGAGAAAGTAGGATTATGGGATTTCCTTTATGATTATGAAAGGTTTGTTGATGTTTCAAAGAGAGTAATGCAAGGGAAGAATCGGATGCAACAGCAACTTATCGTTCGTGAGGTTCTCTTGTCTATGCTCCCTCCCGGTGCCCCGGCTCAGTTCAGGAAATTGTTCCCACCAACAAAATGGAGTTGCGAATTCAATGCCTCACTAACAGTGCCATTCTTTCAATGGTTAGTCGGCCCTTCGGAGGTTGTGGAAGTGGAGGTAAATGGTATAAAGCAAAGAAGTGGAGTTCATATAAAGAAGTGCAGGTACCTAGAAAACAGTGGATGTGTAGGTATGTGTGTGAATATGTGCAAGATACCCACACAAGATTTCTTCACCAATGAATTTGGGCTCCCTCTCACCATGAATCCTAATTTTGAAGACATGAGCTGTGAGATGATATATGGGCAAGTTCCACCACCATTTGAAGAGGATCCAGTATCCAACCAACCTTGCTACAAAGATATATGTTCCATGGCAAATCCTAGTACTCCTTTATGTCCTAAATTACAAGCTTAA MVVVKLQSIQFFAAPPKEIRSRKKQRRFIRCGIAEASGEPAPLGQKTKYNDGPFEKVFMTLFARKMEKFANAKEQRKEKVGLWDFLYDYERFVDVSKRVMQGKNRMQQQLIVREVLLSMLPPGAPAQFRKLFPPTKWSCEFNASLTVPFFQWLVGPSEVVEVEVNGIKQRSGVHIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNFEDMSCEMIYGQVPPPFEEDPVSNQPCYKDICSMANPSTPLCPKLQA Homology
BLAST of CmUC10G183300 vs. NCBI nr
Match: XP_038876564.1 (beta-carotene isomerase D27, chloroplastic [Benincasa hispida]) HSP 1 Score: 526.9 bits (1356), Expect = 9.7e-146 Identity = 249/261 (95.40%), Postives = 255/261 (97.70%), Query Frame = 0
BLAST of CmUC10G183300 vs. NCBI nr
Match: XP_008448557.1 (PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis melo] >KAA0052966.1 beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK11422.1 beta-carotene isomerase D27 [Cucumis melo var. makuwa]) HSP 1 Score: 514.2 bits (1323), Expect = 6.5e-142 Identity = 245/263 (93.16%), Postives = 253/263 (96.20%), Query Frame = 0
BLAST of CmUC10G183300 vs. NCBI nr
Match: XP_011650294.1 (beta-carotene isomerase D27, chloroplastic [Cucumis sativus] >KGN55666.1 hypothetical protein Csa_010048 [Cucumis sativus]) HSP 1 Score: 506.9 bits (1304), Expect = 1.0e-139 Identity = 243/263 (92.40%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of CmUC10G183300 vs. NCBI nr
Match: XP_023540699.1 (beta-carotene isomerase D27, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 488.8 bits (1257), Expect = 2.9e-134 Identity = 238/267 (89.14%), Postives = 248/267 (92.88%), Query Frame = 0
BLAST of CmUC10G183300 vs. NCBI nr
Match: XP_022942554.1 (beta-carotene isomerase D27, chloroplastic [Cucurbita moschata]) HSP 1 Score: 486.5 bits (1251), Expect = 1.4e-133 Identity = 236/267 (88.39%), Postives = 248/267 (92.88%), Query Frame = 0
BLAST of CmUC10G183300 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.7e-39 Identity = 80/206 (38.83%), Postives = 120/206 (58.25%), Query Frame = 0
BLAST of CmUC10G183300 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38 Identity = 81/209 (38.76%), Postives = 122/209 (58.37%), Query Frame = 0
BLAST of CmUC10G183300 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.8e-38 Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 0
BLAST of CmUC10G183300 vs. ExPASy TrEMBL
Match: A0A5A7UFH7 (Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00760 PE=4 SV=1) HSP 1 Score: 514.2 bits (1323), Expect = 3.1e-142 Identity = 245/263 (93.16%), Postives = 253/263 (96.20%), Query Frame = 0
BLAST of CmUC10G183300 vs. ExPASy TrEMBL
Match: A0A1S3BKU4 (beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490700 PE=4 SV=1) HSP 1 Score: 514.2 bits (1323), Expect = 3.1e-142 Identity = 245/263 (93.16%), Postives = 253/263 (96.20%), Query Frame = 0
BLAST of CmUC10G183300 vs. ExPASy TrEMBL
Match: A0A0A0L682 (DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002850 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 5.0e-140 Identity = 243/263 (92.40%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of CmUC10G183300 vs. ExPASy TrEMBL
Match: A0A6J1FRN3 (beta-carotene isomerase D27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447551 PE=4 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 7.0e-134 Identity = 236/267 (88.39%), Postives = 248/267 (92.88%), Query Frame = 0
BLAST of CmUC10G183300 vs. ExPASy TrEMBL
Match: A0A6J1L2P3 (beta-carotene isomerase D27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498565 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 4.5e-133 Identity = 236/267 (88.39%), Postives = 247/267 (92.51%), Query Frame = 0
BLAST of CmUC10G183300 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). ) HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-109 Identity = 182/238 (76.47%), Postives = 208/238 (87.39%), Query Frame = 0
BLAST of CmUC10G183300 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). ) HSP 1 Score: 161.0 bits (406), Expect = 1.3e-39 Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 0
BLAST of CmUC10G183300 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 139.0 bits (349), Expect = 5.3e-33 Identity = 81/229 (35.37%), Postives = 125/229 (54.59%), Query Frame = 0
BLAST of CmUC10G183300 vs. TAIR 10
Match: AT1G03055.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 3.2e-14 Identity = 47/129 (36.43%), Postives = 64/129 (49.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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