CmUC09G181470 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCCTCTCATCCGTCTCACCTTCCTTCGTTCTCCCTTCCAGAAGCCCTCTCTGCTCCCGCCGCCGCCAAATCGCCGTCTCTTTTGGGGACCTCCGGTACCCTCTCCCTCGTGTTCGCGCTTTGTTCGGTCCTCGATCGAGGAAATTGCGGGAAATTTCCTGTGGAGTGGGCGGTGCCGGCGCTAACAAAGGCGACAGCGATGCTGAAGATGGGAGTGAGGATGTGGATATGGAGAGAGCACTTAGCTTAGATGGAAATATTCCTGGTACTTCCAATGAATTTGTGAAGCGTGTTTCTTCCCGTGCTTATGATATGAGGAGGCATCTTCATCAGACGTTTGATAGCAGCAGTTATGACGGTATTTTATACATATCCAAATTCATTACACACGTTCGTCTTTTTTTTTTTATTTTTTTTTCTTTTCTCTTCAATCAATTAATTGATTTATTTGAAGGCGCGATTTGCTTCTGCATGCACCTTGTCGGTTGGTTTTCGTTTTGAATGTGTTAGATATCTGCCTTTTGCTTTAGCTATTGCTGCATCATGCATTTTACTCTGTTTCCTTTTTGAGTTTTAGTTATTGTTATGGATTCGTGTGAAGCGGCTTTCAGCTTTCTTTTGAAACGGGGATCTGAAAACATGTTATTGAGTTCTGTGCTTTCTTTTTACATACTTTTTTCTGTATGATATTATATAATACAACCGGATGCTCTCTTCTGGAGCTATGCAACTTATAGGGGTTAAATTGCTAATTTGGTAGGATGATGGAATCTATTTAGTGATGAAGTTTAAAAAGGTCTCATAATGTTCTTGAATTTTCAATTTTGATCGGTAAGCTAGTTGGACATGGACTAATCATTGATCATGTTCTTGAATTTTCAATTTTGATCGGTAAGCTATTTGGACATGGACTAATCATTGATAATGTTCTTGAATTTTCAACTCTCAACAACTTGTACTGACTAACTGTACTCATTGGAATAGACTGTTTCTGGCTGTACTATGATAAGATAATTTACCCCAAGGGAGTGTCTATGTTTTTCTTTGATGGGGTGGGGTGACTGGACATGGGTATGGTTTTTAACTTAAAGAAAGGAGATATTGTGTGGAAAGGTTCATTACAAGCTAGAGATATTTTTCCTTAGAACTCAAGGACACAGTTGTACAACCTATAGGATCTGACCTATAGAATAGATCCTGTTCAAGTAAGGTCGTTTACAAGCTAGAGATATTAATTTATCAATTCTCTTGTACTTGGAAGCTGCTTTGCTAGTTATGAATAATATGTTCAAATCTTTAGGTTTGTGGTGCTTTTTCATATATGTTCATCTATAGTTTAATCTTACCATTCTTCCATCCCGTCACTCAGTGTTGGAAGCCAATCCATGGAGAGAAAGTTCGAAACCTGTATACGTATTAACACACAATGAGAACCAAATATGCACAATGAAAACTCGAAGAAATAGGAGGTATATAACTGTCTGTTTTTCTGGTCTTAACATTTAGTACTCACTACTCAAGTCAGCGTTTTGTTTGCACAACAGTGAAGTCGAAAGGGAGCTCGGATTATTGTTCTCTAAAGGTGGAAAATGGAGGCCTGAAAATCAGAAAAAACAGTCCAAAACAGGAATTAAATTTCAGATGCTTGTGGAAGATATTACGGAGGGAGTACTTGTAAGTGCACATTTGTTCCCAGAAATATTGAACTACATGGTTTTTGGTAATACCATTCGGTAATAGAGTCCCAAAATATAAACTTCCGTGAATCGTGTTAAATATCGAATGATTAGTAAAAAAAATATTTGTTTCTTTTATAGGTATTTGAAGATGAAACTGAAGCTGCAAGATATTGTGACTTGTTGCAAGGTGGAGGCAAAGGTTGTGAAGGTGTATTTGAGATTGAAGCCTCATCGGTAAGAGATAGCGATATATCTCTCCCGAATTCGTCTAACATATTGCTTTCCGCTTTATGGTTATCATACTATCTGAATTTCAAATATGTATGTGCATATTTGTTCAGGTGTTTGATCTCTGCAAGAAGATGAGGGCTCTTGCTGTCCTGTTCCGAAGAGGGAGGACACCTCCTTTGCCTCAAAGCCTCGAGCTTAACCTCAAAGCTCGTAAACGATCACTTGAAGACCAGGACGAGTTGATGTGA ATGGATTCCCTCTCATCCGTCTCACCTTCCTTCGTTCTCCCTTCCAGAAGCCCTCTCTGCTCCCGCCGCCGCCAAATCGCCGTCTCTTTTGGGGACCTCCGGTACCCTCTCCCTCGTGTTCGCGCTTTGTTCGGTCCTCGATCGAGGAAATTGCGGGAAATTTCCTGTGGAGTGGGCGGTGCCGGCGCTAACAAAGGCGACAGCGATGCTGAAGATGGGAGTGAGGATGTGGATATGGAGAGAGCACTTAGCTTAGATGGAAATATTCCTGGTACTTCCAATGAATTTGTGAAGCGTGTTTCTTCCCGTGCTTATGATATGAGGAGGCATCTTCATCAGACGTTTGATAGCAGCAGTTATGACGTGTTGGAAGCCAATCCATGGAGAGAAAGTTCGAAACCTGTATACGTATTAACACACAATGAGAACCAAATATGCACAATGAAAACTCGAAGAAATAGGAGTGAAGTCGAAAGGGAGCTCGGATTATTGTTCTCTAAAGGTGGAAAATGGAGGCCTGAAAATCAGAAAAAACAGTCCAAAACAGGAATTAAATTTCAGATGCTTGTGGAAGATATTACGGAGGGAGTACTTGTATTTGAAGATGAAACTGAAGCTGCAAGATATTGTGACTTGTTGCAAGGTGGAGGCAAAGGTTGTGAAGGTGTATTTGAGATTGAAGCCTCATCGGTGTTTGATCTCTGCAAGAAGATGAGGGCTCTTGCTGTCCTGTTCCGAAGAGGGAGGACACCTCCTTTGCCTCAAAGCCTCGAGCTTAACCTCAAAGCTCGTAAACGATCACTTGAAGACCAGGACGAGTTGATGTGA ATGGATTCCCTCTCATCCGTCTCACCTTCCTTCGTTCTCCCTTCCAGAAGCCCTCTCTGCTCCCGCCGCCGCCAAATCGCCGTCTCTTTTGGGGACCTCCGGTACCCTCTCCCTCGTGTTCGCGCTTTGTTCGGTCCTCGATCGAGGAAATTGCGGGAAATTTCCTGTGGAGTGGGCGGTGCCGGCGCTAACAAAGGCGACAGCGATGCTGAAGATGGGAGTGAGGATGTGGATATGGAGAGAGCACTTAGCTTAGATGGAAATATTCCTGGTACTTCCAATGAATTTGTGAAGCGTGTTTCTTCCCGTGCTTATGATATGAGGAGGCATCTTCATCAGACGTTTGATAGCAGCAGTTATGACGTGTTGGAAGCCAATCCATGGAGAGAAAGTTCGAAACCTGTATACGTATTAACACACAATGAGAACCAAATATGCACAATGAAAACTCGAAGAAATAGGAGTGAAGTCGAAAGGGAGCTCGGATTATTGTTCTCTAAAGGTGGAAAATGGAGGCCTGAAAATCAGAAAAAACAGTCCAAAACAGGAATTAAATTTCAGATGCTTGTGGAAGATATTACGGAGGGAGTACTTGTATTTGAAGATGAAACTGAAGCTGCAAGATATTGTGACTTGTTGCAAGGTGGAGGCAAAGGTTGTGAAGGTGTATTTGAGATTGAAGCCTCATCGGTGTTTGATCTCTGCAAGAAGATGAGGGCTCTTGCTGTCCTGTTCCGAAGAGGGAGGACACCTCCTTTGCCTCAAAGCCTCGAGCTTAACCTCAAAGCTCGTAAACGATCACTTGAAGACCAGGACGAGTTGATGTGA MDSLSSVSPSFVLPSRSPLCSRRRQIAVSFGDLRYPLPRVRALFGPRSRKLREISCGVGGAGANKGDSDAEDGSEDVDMERALSLDGNIPGTSNEFVKRVSSRAYDMRRHLHQTFDSSSYDVLEANPWRESSKPVYVLTHNENQICTMKTRRNRSEVERELGLLFSKGGKWRPENQKKQSKTGIKFQMLVEDITEGVLVFEDETEAARYCDLLQGGGKGCEGVFEIEASSVFDLCKKMRALAVLFRRGRTPPLPQSLELNLKARKRSLEDQDELM Homology
BLAST of CmUC09G181470 vs. NCBI nr
Match: XP_038889396.1 (uncharacterized protein LOC120079316 [Benincasa hispida]) HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144 Identity = 262/275 (95.27%), Postives = 268/275 (97.45%), Query Frame = 0
BLAST of CmUC09G181470 vs. NCBI nr
Match: KAE8648385.1 (hypothetical protein Csa_009337 [Cucumis sativus]) HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141 Identity = 261/275 (94.91%), Postives = 265/275 (96.36%), Query Frame = 0
BLAST of CmUC09G181470 vs. NCBI nr
Match: XP_004153894.1 (uncharacterized protein LOC101211866 [Cucumis sativus]) HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141 Identity = 261/275 (94.91%), Postives = 265/275 (96.36%), Query Frame = 0
BLAST of CmUC09G181470 vs. NCBI nr
Match: XP_008465759.1 (PREDICTED: uncharacterized protein LOC103503364 [Cucumis melo] >KAA0066602.1 uncharacterized protein E6C27_scaffold979G00100 [Cucumis melo var. makuwa] >TYK14215.1 uncharacterized protein E5676_scaffold5G00410 [Cucumis melo var. makuwa]) HSP 1 Score: 511.5 bits (1316), Expect = 4.4e-141 Identity = 259/275 (94.18%), Postives = 264/275 (96.00%), Query Frame = 0
BLAST of CmUC09G181470 vs. NCBI nr
Match: XP_023524334.1 (uncharacterized protein LOC111788260 [Cucurbita pepo subsp. pepo] >XP_023536900.1 uncharacterized protein LOC111798145 [Cucurbita pepo subsp. pepo] >KAG6585858.1 hypothetical protein SDJN03_18591, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 504.2 bits (1297), Expect = 7.0e-139 Identity = 255/275 (92.73%), Postives = 261/275 (94.91%), Query Frame = 0
BLAST of CmUC09G181470 vs. ExPASy TrEMBL
Match: A0A5D3CRK0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00410 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141 Identity = 259/275 (94.18%), Postives = 264/275 (96.00%), Query Frame = 0
BLAST of CmUC09G181470 vs. ExPASy TrEMBL
Match: A0A1S3CR29 (uncharacterized protein LOC103503364 OS=Cucumis melo OX=3656 GN=LOC103503364 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141 Identity = 259/275 (94.18%), Postives = 264/275 (96.00%), Query Frame = 0
BLAST of CmUC09G181470 vs. ExPASy TrEMBL
Match: A0A6J1GGT4 (uncharacterized protein LOC111454068 OS=Cucurbita moschata OX=3662 GN=LOC111454068 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 7.6e-139 Identity = 254/275 (92.36%), Postives = 261/275 (94.91%), Query Frame = 0
BLAST of CmUC09G181470 vs. ExPASy TrEMBL
Match: A0A6J1IE69 (uncharacterized protein LOC111471864 OS=Cucurbita maxima OX=3661 GN=LOC111471864 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 9.9e-139 Identity = 254/275 (92.36%), Postives = 261/275 (94.91%), Query Frame = 0
BLAST of CmUC09G181470 vs. ExPASy TrEMBL
Match: A0A6J1DT80 (uncharacterized protein LOC111024094 OS=Momordica charantia OX=3673 GN=LOC111024094 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 1.2e-128 Identity = 243/277 (87.73%), Postives = 252/277 (90.97%), Query Frame = 0
BLAST of CmUC09G181470 vs. TAIR 10
Match: AT1G13990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 309.7 bits (792), Expect = 2.4e-84 Identity = 172/282 (60.99%), Postives = 199/282 (70.57%), Query Frame = 0
BLAST of CmUC09G181470 vs. TAIR 10
Match: AT1G13990.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 293.5 bits (750), Expect = 1.8e-79 Identity = 171/310 (55.16%), Postives = 199/310 (64.19%), Query Frame = 0
BLAST of CmUC09G181470 vs. TAIR 10
Match: AT1G13990.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 235.0 bits (598), Expect = 7.4e-62 Identity = 154/314 (49.04%), Postives = 186/314 (59.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|