Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCGGCCAATTTTCCGGCGAAATTTCTGGCTCTGGTTGTCGTTTTCCACCTCAACTCCGCCGTCTCCGCCACCGACGACGCTGCCATGGTCACACCCATTTCCTGCGACAACTGCACCATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCGCCGCCACCGCCGCCGCCGTTTGCAGAGCCAGAGCCACTGCCGGTTCCAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCAAGCGACGGCGGTGAATGGTAATATATATACACCGATTTATAATGAGTCGTCTTCTTCGTTTTTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCACTTTCTGA
mRNA sequence
ATGTTTCCGGCCAATTTTCCGGCGAAATTTCTGGCTCTGGTTGTCGTTTTCCACCTCAACTCCGCCGTCTCCGCCACCGACGACGCTGCCATGGTCACACCCATTTCCTGCGACAACTGCACCATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCGCCGCCACCGCCGCCGCCGTTTGCAGAGCCAGAGCCACTGCCGGTTCCAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCAAGCGACGGCGGTGAATGGTAATATATATACACCGATTTATAATGAGTCGTCTTCTTCGTTTTTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCACTTTCTGA
Coding sequence (CDS)
ATGTTTCCGGCCAATTTTCCGGCGAAATTTCTGGCTCTGGTTGTCGTTTTCCACCTCAACTCCGCCGTCTCCGCCACCGACGACGCTGCCATGGTCACACCCATTTCCTGCGACAACTGCACCATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCGCCGCCACCGCCGCCGCCGTTTGCAGAGCCAGAGCCACTGCCGGTTCCAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCAAGCGACGGCGGTGAATGGTAATATATATACACCGATTTATAATGAGTCGTCTTCTTCGTTTTTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCACTTTCTGA
Protein sequence
MFPANFPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF
Homology
BLAST of CmUC09G180820 vs. NCBI nr
Match:
XP_008463043.1 (PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo])
HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52
Identity = 116/136 (85.29%), Postives = 120/136 (88.24%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPP-- 65
FPAK LALVVVF+LNSAVSATDDAAM TPISCDNCTICQS CRPP EPLPL PPPPP
Sbjct: 2 FPAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPPP 61
Query: 66 -PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKV 125
P+AEPEPLP+PVAPANCPPTIVQCCQFL PPPPPQATA NGNIYTPIYNESSSSFL+V
Sbjct: 62 APYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLRV 121
Query: 126 GLASVLAPVFGLAATF 137
GL S LAPVFGL A F
Sbjct: 122 GLGSALAPVFGLVAIF 137
BLAST of CmUC09G180820 vs. NCBI nr
Match:
KGN44024.1 (hypothetical protein Csa_011878 [Cucumis sativus])
HSP 1 Score: 208.0 bits (528), Expect = 5.2e-50
Identity = 114/135 (84.44%), Postives = 119/135 (88.15%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYE--PLPLSPPPPP 65
FPAK LALVVVF+LN+AVSATDDAAM TPISCDNCTICQS C PPP E PLPLSPPPP
Sbjct: 45 FPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPS 104
Query: 66 PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKVG 125
P+AEPEPLP PVAPANCPPTIVQCCQFL PPPPPQATAVNGN+YTPIYN SSSSFL+VG
Sbjct: 105 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYN-SSSSFLRVG 164
Query: 126 LASVLAPVFGLAATF 137
L S LAPVFGL A F
Sbjct: 165 LGSALAPVFGLLAIF 178
BLAST of CmUC09G180820 vs. NCBI nr
Match:
XP_011659730.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus])
HSP 1 Score: 208.0 bits (528), Expect = 5.2e-50
Identity = 114/135 (84.44%), Postives = 119/135 (88.15%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYE--PLPLSPPPPP 65
FPAK LALVVVF+LN+AVSATDDAAM TPISCDNCTICQS C PPP E PLPLSPPPP
Sbjct: 2 FPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPS 61
Query: 66 PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKVG 125
P+AEPEPLP PVAPANCPPTIVQCCQFL PPPPPQATAVNGN+YTPIYN SSSSFL+VG
Sbjct: 62 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYN-SSSSFLRVG 121
Query: 126 LASVLAPVFGLAATF 137
L S LAPVFGL A F
Sbjct: 122 LGSALAPVFGLLAIF 135
BLAST of CmUC09G180820 vs. NCBI nr
Match:
KAG7037325.1 (hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 184.9 bits (468), Expect = 4.7e-43
Identity = 96/130 (73.85%), Postives = 104/130 (80.00%), Query Frame = 0
Query: 7 PAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPPPFA 66
PAKFLALV+VFHL SA++A DDA+M TP SC+NC +CQSACRPPP L PPPPPP A
Sbjct: 3 PAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPPIA 62
Query: 67 EPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVGLASVL 126
EPEPLPVPV PANCPPTIVQCCQF+PPP P NIYTP YNES SSFLK GL SVL
Sbjct: 63 EPEPLPVPVPPANCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVSVL 122
Query: 127 APVFGLAATF 137
APVFG+AA F
Sbjct: 123 APVFGVAAIF 132
BLAST of CmUC09G180820 vs. NCBI nr
Match:
KAG6607747.1 (hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 183.3 bits (464), Expect = 1.4e-42
Identity = 95/130 (73.08%), Postives = 103/130 (79.23%), Query Frame = 0
Query: 7 PAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPPPFA 66
PAKFLALV+VFHL SA++A DDA+M TP SC+NC +CQSACRPPP L PPPPPP A
Sbjct: 3 PAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPPIA 62
Query: 67 EPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVGLASVL 126
EPEPLPVPV P NCPPTIVQCCQF+PPP P NIYTP YNES SSFLK GL SVL
Sbjct: 63 EPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVSVL 122
Query: 127 APVFGLAATF 137
APVFG+AA F
Sbjct: 123 APVFGVAAIF 132
BLAST of CmUC09G180820 vs. ExPASy TrEMBL
Match:
A0A1S3CI95 (sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103501284 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 9.2e-53
Identity = 116/136 (85.29%), Postives = 120/136 (88.24%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYEPLPLSPPPPP-- 65
FPAK LALVVVF+LNSAVSATDDAAM TPISCDNCTICQS CRPP EPLPL PPPPP
Sbjct: 2 FPAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPPP 61
Query: 66 -PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKV 125
P+AEPEPLP+PVAPANCPPTIVQCCQFL PPPPPQATA NGNIYTPIYNESSSSFL+V
Sbjct: 62 APYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLRV 121
Query: 126 GLASVLAPVFGLAATF 137
GL S LAPVFGL A F
Sbjct: 122 GLGSALAPVFGLVAIF 137
BLAST of CmUC09G180820 vs. ExPASy TrEMBL
Match:
A0A0A0K536 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1)
HSP 1 Score: 208.0 bits (528), Expect = 2.5e-50
Identity = 114/135 (84.44%), Postives = 119/135 (88.15%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMVTPISCDNCTICQSACRPPPYE--PLPLSPPPPP 65
FPAK LALVVVF+LN+AVSATDDAAM TPISCDNCTICQS C PPP E PLPLSPPPP
Sbjct: 45 FPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPS 104
Query: 66 PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKVG 125
P+AEPEPLP PVAPANCPPTIVQCCQFL PPPPPQATAVNGN+YTPIYN SSSSFL+VG
Sbjct: 105 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYN-SSSSFLRVG 164
Query: 126 LASVLAPVFGLAATF 137
L S LAPVFGL A F
Sbjct: 165 LGSALAPVFGLLAIF 178
BLAST of CmUC09G180820 vs. ExPASy TrEMBL
Match:
W9QFT0 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 5.5e-05
Identity = 43/115 (37.39%), Postives = 57/115 (49.57%), Query Frame = 0
Query: 30 AMVTPISCDNCTICQSACRPPPYEPLPL--SPPPPPPFAEPEPLPVPVAP------ANCP 89
A+ +P C NCT+CQ C PP P +PPPPPP P +P+ P CP
Sbjct: 29 ALPSPTPCFNCTMCQYPCLSPPASGNPSYGAPPPPPPELPGLPADIPLPPPQQPWQGKCP 88
Query: 90 PTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVGLASVLAPVFGLAATF 137
PT +QCCQ+ PPPP +Y P YN + L + L ++ +F A TF
Sbjct: 89 PTPIQCCQYTPPPP-------YGVYVP-YNHALPCSLPIFLYVIMMLLFSSAVTF 135
BLAST of CmUC09G180820 vs. ExPASy TrEMBL
Match:
A0A6A1VX00 (4Fe-4S ferredoxin-type domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR4G016275 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 6.0e-04
Identity = 55/139 (39.57%), Postives = 65/139 (46.76%), Query Frame = 0
Query: 20 NSAVSATDDAA---MVTPISCDNCTICQSACRPP----PYEPL----PLSPPPPPPFAE- 79
N SAT +A+ + +P +C NCT+CQ C P P PL PL PPPPP AE
Sbjct: 18 NLGCSATGEASGDVLPSPSACTNCTLCQYPCHTPAPPLPDYPLYGTPPLPPPPPPSLAEY 77
Query: 80 ---------PEPLPVP---VAPANCPP-TIVQCCQFLPPPPPQATAVNGNIYTPIYNESS 134
P P P P A NCPP T+VQCCQ+ PPP A Y P N S+
Sbjct: 78 PPYETSSPPPPPPPPPSQLPAQGNCPPTTVVQCCQY---PPPIAYG-----YVPYNNYSA 137
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008463043.1 | 1.9e-52 | 85.29 | PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis me... | [more] |
| KGN44024.1 | 5.2e-50 | 84.44 | hypothetical protein Csa_011878 [Cucumis sativus] | [more] |
| XP_011659730.1 | 5.2e-50 | 84.44 | leucine-rich repeat extensin-like protein 3 [Cucumis sativus] | [more] |
| KAG7037325.1 | 4.7e-43 | 73.85 | hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6607747.1 | 1.4e-42 | 73.08 | hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3CI95 | 9.2e-53 | 85.29 | sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=365... | [more] |
| A0A0A0K536 | 2.5e-50 | 84.44 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1 | [more] |
| W9QFT0 | 5.5e-05 | 37.39 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1 | [more] |
| A0A6A1VX00 | 6.0e-04 | 39.57 | 4Fe-4S ferredoxin-type domain-containing protein OS=Morella rubra OX=262757 GN=C... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
