CmUC09G180340 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G180340
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr09: 35777432 .. 35777809 (-)
RNA-Seq ExpressionCmUC09G180340
SyntenyCmUC09G180340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGTATGGGAATTTCGAAAGGGCTGTCATTTGTTTGCGTCATCGCCATGTTGATTTGCAAAGTCGCCGACGCCGATTCCGACCACTTCGGGATCCACGCGGTGGGGCACGCGGTGGAGCCGTTCTGCCCAGGTGGATACTCCGACAGAGGGGACCACTGCCAGCACATCGGCCGCATCACCTCCGTAAACTACAACGAGAATGATGACGAGGACGAATTTGACGACACGTATAAAGTAGTGGGAAAGCTTTCGATGTCGTTGTCCACGTCGGAGTCCACGGAGGCCGCCGAAGAACGGGCGGTGGGTTTAGAACTTGAGACCATTTCACCTGAAGAACAGGCTTCCGGTAGAGCCATCGTCTTGGGGCATTGA

mRNA sequence

ATGGACAGTATGGGAATTTCGAAAGGGCTGTCATTTGTTTGCGTCATCGCCATGTTGATTTGCAAAGTCGCCGACGCCGATTCCGACCACTTCGGGATCCACGCGGTGGGGCACGCGGTGGAGCCGTTCTGCCCAGGTGGATACTCCGACAGAGGGGACCACTGCCAGCACATCGGCCGCATCACCTCCGTAAACTACAACGAGAATGATGACGAGGACGAATTTGACGACACGTATAAAGTAGTGGGAAAGCTTTCGATGTCGTTGTCCACGTCGGAGTCCACGGAGGCCGCCGAAGAACGGGCGGTGGGTTTAGAACTTGAGACCATTTCACCTGAAGAACAGGCTTCCGGTAGAGCCATCGTCTTGGGGCATTGA

Coding sequence (CDS)

ATGGACAGTATGGGAATTTCGAAAGGGCTGTCATTTGTTTGCGTCATCGCCATGTTGATTTGCAAAGTCGCCGACGCCGATTCCGACCACTTCGGGATCCACGCGGTGGGGCACGCGGTGGAGCCGTTCTGCCCAGGTGGATACTCCGACAGAGGGGACCACTGCCAGCACATCGGCCGCATCACCTCCGTAAACTACAACGAGAATGATGACGAGGACGAATTTGACGACACGTATAAAGTAGTGGGAAAGCTTTCGATGTCGTTGTCCACGTCGGAGTCCACGGAGGCCGCCGAAGAACGGGCGGTGGGTTTAGAACTTGAGACCATTTCACCTGAAGAACAGGCTTCCGGTAGAGCCATCGTCTTGGGGCATTGA

Protein sequence

MDSMGISKGLSFVCVIAMLICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMSLSTSESTEAAEERAVGLELETISPEEQASGRAIVLGH
Homology
BLAST of CmUC09G180340 vs. NCBI nr
Match: KAE8647343.1 (hypothetical protein Csa_003811 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 1.7e-44
Identity = 93/110 (84.55%), Postives = 101/110 (91.82%), Query Frame = 0

Query: 1   MDSMGISKGLSFVCVIAMLICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGR 60
           M  MGISKGLSFVCVIA+LICKVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQH+GR
Sbjct: 1   MTKMGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGR 60

Query: 61  ITSVNYNENDDEDEFDDTYKVVGKLSMSLSTSESTEAAEERAVGLELETI 111
           I+SVNYNENDD+DEFDDTYKVVGKLS SL    S EAAE+RA GLELE++
Sbjct: 61  ISSVNYNENDDDDEFDDTYKVVGKLSASL----SPEAAEDRADGLELESL 106

BLAST of CmUC09G180340 vs. NCBI nr
Match: KAA0061659.1 (hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 186.0 bits (471), Expect = 1.9e-43
Identity = 95/124 (76.61%), Postives = 106/124 (85.48%), Query Frame = 0

Query: 4   MGISKGLSFVCVIAMLICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITS 63
           MGISK LSFVCVIA+L+ KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQH+GRI+S
Sbjct: 1   MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 60

Query: 64  VNYNEN--DDEDEFDDTYKVVGKLSMSLSTSESTEAAEERAVGLELETISPEEQASGRAI 123
           VNYNEN  DD+DEFDD YKVVGKLS+S+S       AE++A GLEL TISP++Q S   I
Sbjct: 61  VNYNENDDDDDDEFDDRYKVVGKLSVSVSPD-----AEDQADGLELGTISPDQQLSNNVI 119

Query: 124 VLGH 126
           VLGH
Sbjct: 121 VLGH 119

BLAST of CmUC09G180340 vs. NCBI nr
Match: KAG6572424.1 (hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-39
Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = 0

Query: 16  IAMLICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEF 75
           I++L  K+A AD  HFGIHA+GHAVEPFCPGGYSDRGDHC HIGRITSVNY E+DD+D+F
Sbjct: 8   ISLLFIKLAHADPHHFGIHAIGHAVEPFCPGGYSDRGDHCNHIGRITSVNYGEDDDDDDF 67

Query: 76  DDTYKVVGKLSMSLSTSESTEAAEERAVGLELETISPEEQASGRAIVLGH 126
           DDTYKV+GKLSM++S SEST+ AE+ AVGLELE ISPEEQ S +  VLGH
Sbjct: 68  DDTYKVLGKLSMAMSVSESTDDAEKEAVGLELEDISPEEQLSDKVTVLGH 117

BLAST of CmUC09G180340 vs. NCBI nr
Match: KAG6589281.1 (hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20
Identity = 67/126 (53.17%), Postives = 84/126 (66.67%), Query Frame = 0

Query: 4   MGISKGLSFVCVIAMLIC----KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIG 63
           M ISKGLSF+ ++A+ IC    +VADA S H G     HAVE  CPGG    G+HC H G
Sbjct: 1   MPISKGLSFLGLVAIFICLLFIEVADAHSGHSGT----HAVEKPCPGG----GEHCHHSG 60

Query: 64  RITSVNYNENDDEDEFDDTYKVVGKLSMSLSTSESTEAAEERAVGLELETISPEEQASGR 123
           R+ +   +E+DD   FDDTYK   K  M++S SESTE AEERAV +E+ET SPEE A+ +
Sbjct: 61  RMAAQTVDEDDD---FDDTYKAPVKGRMAMSMSESTEDAEERAVEMEIETTSPEEPANQK 115

Query: 124 AIVLGH 126
            +VLGH
Sbjct: 121 VVVLGH 115

BLAST of CmUC09G180340 vs. NCBI nr
Match: XP_030928299.1 (uncharacterized protein LOC115954561 [Quercus lobata])

HSP 1 Score: 54.3 bits (129), Expect = 8.8e-04
Identity = 38/119 (31.93%), Postives = 61/119 (51.26%), Query Frame = 0

Query: 9   GLSFVCVIAMLICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNE 68
           G   VC++ M + +  D++ ++  IHAV H  +  C GG ++ GD C+        + N+
Sbjct: 13  GALMVCLLLMKVTEANDSEPNYAPIHAVRHDGK-HCDGGQANNGDQCRE-------DDNK 72

Query: 69  N-DDEDEFDDTYKVVGKLSMSLSTSESTEAAEERAVGLELETISPE-EQASGRAIVLGH 126
           N D +D+ DDTYKVV K+S+S +TS           G  ++ + P  +       VLGH
Sbjct: 73  NVDVDDDVDDTYKVVNKMSVSFTTS----------AGQSMDPLDPSFDDLENHVTVLGH 113

BLAST of CmUC09G180340 vs. ExPASy TrEMBL
Match: A0A0A0KE60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421690 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.8e-48
Identity = 100/125 (80.00%), Postives = 109/125 (87.20%), Query Frame = 0

Query: 1   MDSMGISKGLSFVCVIAMLICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGR 60
           M  MGISKGLSFVCVIA+LICKVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQH+GR
Sbjct: 1   MTKMGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGR 60

Query: 61  ITSVNYNENDDEDEFDDTYKVVGKLSMSLSTSESTEAAEERAVGLELETISPEEQASGRA 120
           I+SVNYNENDD+DEFDDTYKVVGKLS SL    S EAAE+RA GLEL   SP ++ S + 
Sbjct: 61  ISSVNYNENDDDDEFDDTYKVVGKLSASL----SPEAAEDRADGLELGIFSPHDRLSVKE 120

Query: 121 IVLGH 126
           IVLGH
Sbjct: 121 IVLGH 121

BLAST of CmUC09G180340 vs. ExPASy TrEMBL
Match: A0A5A7V7L4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00280 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.3e-44
Identity = 95/124 (76.61%), Postives = 106/124 (85.48%), Query Frame = 0

Query: 4   MGISKGLSFVCVIAMLICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITS 63
           MGISK LSFVCVIA+L+ KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQH+GRI+S
Sbjct: 1   MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 60

Query: 64  VNYNEN--DDEDEFDDTYKVVGKLSMSLSTSESTEAAEERAVGLELETISPEEQASGRAI 123
           VNYNEN  DD+DEFDD YKVVGKLS+S+S       AE++A GLEL TISP++Q S   I
Sbjct: 61  VNYNENDDDDDDEFDDRYKVVGKLSVSVSPD-----AEDQADGLELGTISPDQQLSNNVI 119

Query: 124 VLGH 126
           VLGH
Sbjct: 121 VLGH 119

BLAST of CmUC09G180340 vs. ExPASy TrEMBL
Match: A0A2N9FLD3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-05
Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = 0

Query: 15  VIAMLICKVADAD-SDHFG-IHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDD- 74
           ++ +L+ KV++AD SDH+  IH + H     C G + + GD C+          N++DD 
Sbjct: 16  LVCLLLIKVSEADESDHYAPIHVIKHD-GIHCDGAHPNNGDQCR----------NDDDDN 75

Query: 75  ---EDEFDDTYKVVGKLSMSLSTSESTEAAEERAVGLELETISPEEQASGRAIVLGH 126
              +D+ DDTYKVV K+S+S S S    ++ E     E +  S EE+ +   IVLGH
Sbjct: 76  EEVDDDVDDTYKVVNKMSVSFSASTGQSSSSEDP--SESDATSTEEELNNHMIVLGH 119

BLAST of CmUC09G180340 vs. ExPASy TrEMBL
Match: A0A7N2MB50 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.2e-04
Identity = 38/119 (31.93%), Postives = 61/119 (51.26%), Query Frame = 0

Query: 9   GLSFVCVIAMLICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNE 68
           G   VC++ M + +  D++ ++  IHAV H  +  C GG ++ GD C+        + N+
Sbjct: 13  GALMVCLLLMKVTEANDSEPNYAPIHAVRHDGK-HCDGGQANNGDQCRE-------DDNK 72

Query: 69  N-DDEDEFDDTYKVVGKLSMSLSTSESTEAAEERAVGLELETISPE-EQASGRAIVLGH 126
           N D +D+ DDTYKVV K+S+S +TS           G  ++ + P  +       VLGH
Sbjct: 73  NVDVDDDVDDTYKVVNKMSVSFTTS----------AGQSMDPLDPSFDDLENHVTVLGH 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8647343.11.7e-4484.55hypothetical protein Csa_003811 [Cucumis sativus][more]
KAA0061659.11.9e-4376.61hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa][more]
KAG6572424.11.3e-3974.55hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6589281.11.0e-2053.17hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_030928299.18.8e-0431.93uncharacterized protein LOC115954561 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KE604.8e-4880.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421690 PE=4 SV=1[more]
A0A5A7V7L49.3e-4476.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A2N9FLD32.9e-0535.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1[more]
A0A7N2MB504.2e-0431.93Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G180340.1CmUC09G180340.1mRNA