CmUC09G176740 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGTAAACCCTAGTGAGTGTCACTTTTCGTTTCCACCCTCGTCTCCTCTCCTTTTGGTCCTTCTCCCATCTGTGTCGTGGCCGCAGATCGGCACCCAACCCATAAACGAAGGTTTCTCTCCCTCACTCTCTGCGGCAGCCACACCCACGCCAATCTCTCTCCGTCTTTGATATCTTTTTTCTCTCCTCATCTTCACCGTTGTCATTATCGATTGTCAGCACGCCCCTGCACTCAGTTTCTTTCTCCTTCCCTTCTCTCACTCTCTACTGCAATCCCACGCCGCAATGCTTCCATCTCGAGGTCTATCGTCCTCATCAAAGTTTTATTTCGCTTGTTTTTCTTTCGCTCTTCTCTATTTCGACCCAACTTTGGAATCGGGGCATTTTTTTTTTTTAAATTTTTTATTCCAATCTGTTTTAGTTGAATATTTTTTTGGATCAAAACAAGATTTCAAATCATTTTGGTTTCTCAATTCTGTGTTTTTATTCATTCCAATCACCAGAAATGATTTGAAATCCATTCTGATTTGAAATCGTAGTTCCAAACAGGGGTAAATGGCATTCAAAATGTTTTTAGCGTTTTCTGCAAAGCAAAAGTGAGAAAAAAATCTAAATTGTTTCTGTTCTTCATAATTCTGAATCTAAGGAAGTGGCTGCCATTTCATTCCTTTTTATCTTTGTTTTTGCTTCCTTCAGTTGGTCTTTTCTTTTTTGTATTTAATTTACGTTTCCGAGTTTTAATTTTGAGCTTTTCATGTTCTATGTAGGATTTCTATTGCTAGAATTAGAATTTGGTATCTGGTTCAGGATTATCCTTGCTGGACTTCAATAGTGGTGGATTGCCTTTCATAGCCTAAAATTGGATGGATCTGGCATGGCTGAGTGCCATTGTAGTTGGGGCCGGCTGCCTTGTTTTGGGATACTATATTGGTTCGAAGTATCCTCCTCGCATCTTTATCAAAGCCAAATTAGCCAAAAGCAACGAATCCAGCAAAAATGGGAAGAAGGATAAGCCTAAAGAGCCACTGGAGGTTGAAAGTTTGGCTGACATTCTCGATGACTTCAAGATGGTCTGCCTCTGAGTGTCTTTGTCTATTTCTGTTTCTCTTGTGCTATCTATTAGAAAATCATTCTCGATTACTTTAAGATGTTGTCTTTTTCTTTGTCTCTAAAGAAAATGTAACAACATTTCACTGTGTCTCTTCAGGTTTTAGTTGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATTGCAGCCCAATGCAGGTATTTTATTACCACCTTGTGGTTGCTCTTTCATTACTTGATATTTTAAATGCTAATTGCTAACAATGGCAGAAGTTTTAAATATTACTGCTGCTTGCATATTGTGAATGTCGGAGTTTTGTTGTTGTTGTTTTTCAAAAGCTTAGGTTAACAACCCACTGCTCACCTGGTATGGTAAAATTCCCACAATGACTATAATAAATTTAATTTGTCAATGACTTTTTTTTTTGGATATCCATGAGTAAAAATTTATCAATGACTACAACAACAAGAGACGTTTTGGACGAAAATAGGCTTCAAGTCAAAGTTTTCATAATGCAGAATTTTGGAAGATAATAGTGCTTCTATTCTTCAAAATCAGGAAAATTATTGACGAATGGAATCTTCTTATCAGAAAAAAAAAATAAAAATTGATGAATGGAATCTACAAAACAACAACAAAAGTGCTAATGGTAAGAATCAGGAACATCCTCGTAAATATAATTTCAGAAGATCAGCAAACTAAGACTAAAATCTCGCATTTATATTGCAAATGAGACCGTGGAGGAAAAGGTTGAGTCTGATAAAGTGGATCCACAGTTTTGGATAAAACATGGGAAGTAAAGCAGGGTCAGAAATTGAGAAAGGCGAAGAAGAGGGTGCATCATCAATAAATCTTGCTTTCTTCATGAAAAACCAAAAAGAAAAATAAAAGCTTCAATGGGATTGAGGCAAGGGGATTCTGTTGCCCTTTTTCTTTACTATGAGGGTCATCCTAGGGAGGGGTGGAGTCTTGACAAAATTACCCTCTGAATACCAGTCATTTTTAAGATTAGTTTACTGTATAAGGAGGATTCTCTCGTCCCTTCATTTTCTAGGTGTTCTACTGTTGGTGGATCTCAACTGTTTTCTGGTTATTTGGTTTGAGGATTATTGTCTGGATTCTTTGCTTGGTTGGTTGATAGTTGAATAATAGACAATAGTCATAAGGATTATGGTACGAAGGGGTGTGTGTGTGTGTGAAAGAGAGAGATTTCGTGGAATATAATATTATAGCATACGACTAGATTCTGGGTTTTACGTTCTTATTGTATTCTGTCATACGGATACCTTTCAACTTCTCATGATGGATTGCAAATTGGGACATAATGGTTATACTAAAACTTGGTTGAGGTTCCATAGGTGCAGTTTAATATGATAAGAAAGAAGAACTATCAGAACTTTTATGGTACAACCTACAAGGCAAGGCATTATAAGTGGAACATGTAATTGAAAAAACACCTGCCAATGAAGGAATAATGATAAATAATGATGGAATTTAATCATATTGAGTTGCATTATGATGGATACTTTCAGTTATCACCTCCCTTGTACTATTCTTATCCCATGGAAGTCCATTTTTTCTCAAAATAATTTACGTGTGGTTGTGCCTCTGCTGAATTTTCGTGAACACAATATTATGATGCTTAACCGTTGTGCAGGCATAAAGTAGTGTAAGCTAATGAGTGCTTGTTCCTTAAAAGCTAAATTTAAACATTCTTACAAAGGAAGGGCCAAGTAAGATAGATGTTAAAAAAAACCATTGAAATCCCTATCCTTGTCAGCAAAAGATATGATGATTCTTCTCATTCCAAATGGATCACAGGAAGGCCCTAATAAAGTAAAATTACTTGGTGGGAGTGGAAGATAAAAATAATAATAATAATAAAAAATCTTCCCATCGGGTATAAAAATCCCGGGATCAGCAACATGAAACTTTTCAAGCATACAAAATAAATATTCTAGTAATGCTCAGGAATATGTTTTTGAGTATTACCGTCCGAAAAAAACCCATATTACATTATGGCAATTATCAGCTAACTCGTAGCCGACCTTTATTGAAAGAAATACCGTCCTACAGATATGACTGTATAAGTACTGCCTTTTTACTTGTTTAATAGTTAAATTATTGAGAATTGAAACTAGTGATCTAATTTTCTCAAACCTTTGCACAGTAAAGTTCCCAGTTTCTTAATGTTGTAAATTGGATTTGGACTAGTTTTTAATCTACTCTACTTGCTTTTTATTAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCAAAAGCCTTGAATAGGTATGTATCTACAAAATAGTCCTCTCTATGTTAATATGCATCGCATACTTCGTTCTATATACATTTAGTTTTGAATTTTTTTACATGTAGGTGGGAGATGTGTGCGCAACCCAAGGTGGTTCTGAAGATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGTAATAATTCCGCTATGATTTCTTTTCTTAAAATTTCCACTATGACTTTATGGTATCTAGCTGTTTTCTTTATGTGTATGTCAAAAGAACATTGCATCTCCAGTTAGTTGATCTTTGTTAGTTTTTCTATTCTGTTATATATATTTATATTAGGGGGTGTAAGCAATTGATTTGAGCTGGTTTCTTGCTGAAACCAAGTTTTTTCTCCAAACTGACCAACCCACTATTTTTTTTTTTTATTTGACTTAATTAATCGGCTATTGTACTTCAAAACAGCCAAACTACTAATTAAGACGTATGTTCCTCTTAGCTTGCACCCCGCCAACCCCCTTCATATTTATTGAAACATTTGTTCTTTTACGGCCTTACCTCTGGTCAGCTTCTTTTCGTCTCATTAGATCTTATTTTTCTTACCAACTTTCCCATAGTGCCATGAGCATAATATTATACAATTCGTTCTAGTGTTTATTTCTGGTTAGTCTTCTTTATAATCTTGCTTCCTTTTCTTCCCAGCTAATTTTGCATCATATCTGAGACAATTCAATGCAGCTTGCTCTTTTCTATATCTCATCTATTCTTTGAGGCCTTTGAGTAAGTTATTTTATTTTTCAAAATTTTATATTATTGTACATCAGGAGAGGGCAAAATCATTGAAGTTACCAACTCATATTACCATTGATGCCGGAAGAACTCAAATTGCTCCAAGTAAGTTGTATGAAATTCTCTCAAGTAGATCGTTTTTTTCATGGCAAATTTATCAAGTTCACCAATTTTCACTTTTCTGTTCTTTCAGATTCAAGAACGGTGATGGCAATTCTTGGTAAGTAGATTTTTTCCATGCAACCTTTATAAATCAAAGAGTCTTTGTTGCTGCTATATTCAAATTAAGCATTCCTTTTTCAGCAAGATTCCTCAGATCGGAGGAATGCTAAATTTTTCACTCTTTTGTTTGACTCGTAGTTAGCATAACTGGTGGATCTACTTAACAATTTCATTTTGGTGCTAACTAAAATTATGATAAACTAATTGGGTTCCAATGAACATAATAGTATAATACGCTTCTTACTTCCCAAATTGCAGGTCCTGTTGAAGTGGTTGATGAAGTAACTGGTGGGTTGAAACTTTTGTAGTTTCTAAATTCTTGCCTGTCTCTCCCCAAACTTCTTGAAGAGTTCAATTCTCAGAAGGCTCTGCTCTGCAAAATCCATCCATGCTTGGACCAACTACACGGTATGAAACCGATCTATGTGGAGCTGAGCTATCATGA AAGTAAACCCTAGTGAGTGTCACTTTTCGTTTCCACCCTCGTCTCCTCTCCTTTTGGTCCTTCTCCCATCTGTGTCGTGGCCGCAGATCGGCACCCAACCCATAAACGAAGGTTTCTCTCCCTCACTCTCTGCGGCAGCCACACCCACGCCAATCTCTCTCCGTCTTTGATATCTTTTTTCTCTCCTCATCTTCACCGTTGTCATTATCGATTGTCAGCACGCCCCTGCACTCAGTTTCTTTCTCCTTCCCTTCTCTCACTCTCTACTGCAATCCCACGCCGCAATGCTTCCATCTCGAGGATTTCTATTGCTAGAATTAGAATTTGGTATCTGGTTCAGGATTATCCTTGCTGGACTTCAATAGTGGTGGATTGCCTTTCATAGCCTAAAATTGGATGGATCTGGCATGGCTGAGTGCCATTGTAGTTGGGGCCGGCTGCCTTGTTTTGGGATACTATATTGGTTCGAAGTATCCTCCTCGCATCTTTATCAAAGCCAAATTAGCCAAAAGCAACGAATCCAGCAAAAATGGGAAGAAGGATAAGCCTAAAGAGCCACTGGAGGTTGAAAGTTTGGCTGACATTCTCGATGACTTCAAGATGGTTTTAGTTGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATTGCAGCCCAATGCAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCAAAAGCCTTGAATAGGTGGGAGATGTGTGCGCAACCCAAGGTGGTTCTGAAGATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAAGTTACCAACTCATATTACCATTGATGCCGGAAGAACTCAAATTGCTCCAAATTCAAGAACGGTGATGGCAATTCTTGGTCCTGTTGAAGTGGTTGATGAAGTAACTGGCTCTGCTCTGCAAAATCCATCCATGCTTGGACCAACTACACGGTATGAAACCGATCTATGTGGAGCTGAGCTATCATGA ATGGATCTGGCATGGCTGAGTGCCATTGTAGTTGGGGCCGGCTGCCTTGTTTTGGGATACTATATTGGTTCGAAGTATCCTCCTCGCATCTTTATCAAAGCCAAATTAGCCAAAAGCAACGAATCCAGCAAAAATGGGAAGAAGGATAAGCCTAAAGAGCCACTGGAGGTTGAAAGTTTGGCTGACATTCTCGATGACTTCAAGATGGTTTTAGTTGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATTGCAGCCCAATGCAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCAAAAGCCTTGAATAGGTGGGAGATGTGTGCGCAACCCAAGGTGGTTCTGAAGATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAAGTTACCAACTCATATTACCATTGATGCCGGAAGAACTCAAATTGCTCCAAATTCAAGAACGGTGATGGCAATTCTTGGTCCTGTTGAAGTGGTTGATGAAGTAACTGGCTCTGCTCTGCAAAATCCATCCATGCTTGGACCAACTACACGGTATGAAACCGATCTATGTGGAGCTGAGCTATCATGA MDLAWLSAIVVGAGCLVLGYYIGSKYPPRIFIKAKLAKSNESSKNGKKDKPKEPLEVESLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGSALQNPSMLGPTTRYETDLCGAELS Homology
BLAST of CmUC09G176740 vs. NCBI nr
Match: XP_038901927.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 332.4 bits (851), Expect = 2.7e-87 Identity = 169/176 (96.02%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of CmUC09G176740 vs. NCBI nr
Match: XP_004148093.1 (peptidyl-tRNA hydrolase 2, mitochondrial [Cucumis sativus] >XP_008459200.1 PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis melo] >KAA0042983.1 peptidyl-tRNA hydrolase 2 [Cucumis melo var. makuwa] >KGN63396.1 hypothetical protein Csa_022142 [Cucumis sativus]) HSP 1 Score: 331.6 bits (849), Expect = 4.6e-87 Identity = 169/176 (96.02%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of CmUC09G176740 vs. NCBI nr
Match: XP_022148652.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like isoform X1 [Momordica charantia]) HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86 Identity = 166/175 (94.86%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of CmUC09G176740 vs. NCBI nr
Match: KAG7035146.1 (Peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 328.9 bits (842), Expect = 3.0e-86 Identity = 167/175 (95.43%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of CmUC09G176740 vs. NCBI nr
Match: XP_022947215.1 (peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947216.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata] >XP_022947217.1 peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 328.6 bits (841), Expect = 3.9e-86 Identity = 167/175 (95.43%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy Swiss-Prot
Match: Q9Y3E5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.4e-29 Identity = 70/133 (52.63%), Postives = 89/133 (66.92%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy Swiss-Prot
Match: Q8R2Y8 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28 Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy Swiss-Prot
Match: Q3ZBL5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.2e-28 Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy Swiss-Prot
Match: O97067 (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 PE=2 SV=2) HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24 Identity = 57/113 (50.44%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy Swiss-Prot
Match: O13830 (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC19A8.14 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.3e-23 Identity = 76/190 (40.00%), Postives = 103/190 (54.21%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy TrEMBL
Match: A0A5A7TI30 (Aminoacyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00570 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.2e-87 Identity = 169/176 (96.02%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy TrEMBL
Match: A0A0A0LTR6 (Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G437060 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.2e-87 Identity = 169/176 (96.02%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy TrEMBL
Match: A0A1S3C945 (Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103498393 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.2e-87 Identity = 169/176 (96.02%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy TrEMBL
Match: A0A6J1D5N0 (Aminoacyl-tRNA hydrolase OS=Momordica charantia OX=3673 GN=LOC111017259 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87 Identity = 166/175 (94.86%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of CmUC09G176740 vs. ExPASy TrEMBL
Match: A0A6J1G686 (Aminoacyl-tRNA hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111451148 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 1.9e-86 Identity = 167/175 (95.43%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of CmUC09G176740 vs. TAIR 10
Match: AT3G03010.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 241.5 bits (615), Expect = 5.8e-64 Identity = 131/177 (74.01%), Postives = 145/177 (81.92%), Query Frame = 0
BLAST of CmUC09G176740 vs. TAIR 10
Match: AT3G03010.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 241.5 bits (615), Expect = 5.8e-64 Identity = 131/177 (74.01%), Postives = 145/177 (81.92%), Query Frame = 0
BLAST of CmUC09G176740 vs. TAIR 10
Match: AT5G16870.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 235.0 bits (598), Expect = 5.4e-62 Identity = 128/175 (73.14%), Postives = 139/175 (79.43%), Query Frame = 0
BLAST of CmUC09G176740 vs. TAIR 10
Match: AT4G32900.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 108.2 bits (269), Expect = 7.6e-24 Identity = 55/111 (49.55%), Postives = 77/111 (69.37%), Query Frame = 0
BLAST of CmUC09G176740 vs. TAIR 10
Match: AT4G32900.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein ) HSP 1 Score: 66.2 bits (160), Expect = 3.3e-11 Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|