CmUC09G174010 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G174010
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRetrotrans_gag domain-containing protein
LocationCmU531Chr09: 20746374 .. 20748792 (-)
RNA-Seq ExpressionCmUC09G174010
SyntenyCmUC09G174010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCCATCGATCCTTGATCTTCGAACCACTCCACAAGCAAGATCGATCAAGTCAAGCTTGAATGATTCTGAACATGTAATCTAAACACCATAGAATTGCAAAATAAACATAGCACAAGGCTAAAAGAAAGCTCAATGGCTCTTTTACTACCTTTTCCAAGTCTCTTCCATGTCTCTTTTTGTGAACAATTACATGCCATTATATAGCCCTCAAAAGCTGACTCTAGACATTCTATGAGCCATTTGAAGAGTTCTAACCCTCATAGTTAATGACCATTATAAGTCATGATCTAAATGTAACATAAAAATACATAAAATGACTTAAAGAATAAAATTACATTTAATTAATACAATAAATCCGAAAATATTTCTTTTTAATCAGCAACCCATCATTTTGTAACCATCTTTGAGTTATGAACCTCCACTTGAACTCTTTTTTCCATAAATGAAGTTTGATTCTTCATAAATTTCACTTGACTTCACATAATTTTTTTTCTTTGGTTAGTGTAAACTTCGGACAAAATGGATGGCTCCTTCTTGTAGTTCATATTGCATGATTGAGGTTCATCCATTCATATCACCAGTGGGCGCCCCACGGACGGCAGTCTCACCAGCTTGGAAGAAGGGTTGGAAGAGGTAGAACTTGTCGTGGTTCGGCTTAGTGAACGTATTGAAGAGCTTGTCTAAGAAAGCTCGGAGATCACGACAGTTGCAAAAGAGATGATCAAGGAGCTGGGACAGACATGGGTAAAGAGGTAAGTACCCTCTTTGATGAAGTAGCCAACCTTAGGAAGTTTGTGGAGGGGGAACTCCACGACCTTTGCGGGGAAGTCGACGACATGAGGAAGGAGTGTTGGGCACGACATAGTATTAATGGTGGCACATCCACCAGCACCTCATCCGCTTTGCATGGCACCCATGGGGTGAAGGTGTCGAAGCCTGATACTTACGATGGTACAAGGAGCGCCACGGTGATTAAGAACTTCTTGTTCGGTCAAGAGCAATACTTTGAGGCCCTAGGCGTCGTCCATGATGGCACTAAGATTGCGAATACGCCCAAGTTCCTACGTGAGGCAGCACAATTATGGTGGCGTAGGAAGCATGCTAAGCGTGAGCGGGATGGATGCAACATCCGAACGTGGGGGCAATTCAACGTAGAATTCCGAAAGCACCTTGTTACCCACAATGTTGATATGGAAGCTCGAGGCAAACTAAGGTGATTAAGGCAGACCGGTAGCATACCCGAGTACATCAAAGAGTTCACGACCCTAATGCTGGAATCAAAGGCCTATCTGGCAAAGATGCACTTTTTTATTTCTGCGATGGTCTCAAGGATTGGGCAAGGATAGAGCTTGATAGGCGGAGTGTGAACACGCTCGACGATGCCATAGCCACTGCTGAGATGTTCACTGACTTCTTGGCCAAAGGGAAGAAGACCACCAAGAATGAAGGAGAAGTGTCGGAGTCCAAGGAATTTGATGGGCATAAAGCTGAGGAGAGCCACAAGAATGAGAGAAAGAATGGAAAGGCTGCTGAAAAAAATAGAGGTAAGCCCTTCAAACGCCCTTGCTTCCTTTGCGATGGCCCACATTGGACAAGGGAGTGTCCACAAAAGAAGGCCTTAAGGGCCATGGTCCCAGTCCCACATGCAAGAACAAGTCGAGCCCACCGGTCATGTGGGTTCCTTGTAGCAGATTAGTGCCATGACCAAGGGCTTCTCTCCATGGGAGACTGGGCAGAAGGGGCAACTTTATGTTGACGTGGTGATCAACGGTGAAGTTCGAGAGGTGTTGCTCGACACAAGAGCATCACACAATTTCGTCGATCCAAGTGAGGCCGTAATCCTTGGTCTTAAGGTCGTTAGGGGAGGTGGAAAGATGAAGGCGGTGAACTCAAGAACCATAGAAGCTGAGGAACTTGTCAAAGATGTTCTCCTAAAGGTGGGAACATGGCGAGGTTTGATGGATGTCACCATGGTCCCAATGGATGACTACAAGGTGGTGTTAGGTTTGGAGTTCTTTAGGAAGGCGAATGCCACGCATACACCCGCCTTAAAACTATTGATTGTGTTTGATGAACACAGAATCCGCATGGTCCCTTTGAAAAACAAGGAACTACTCGAGACGAAGGTGATGTCACACTTCGCTTGGTGAAGGGATGCACGAGAAGAAGAAGGCACTCAAAGAAGCCCCACGCAATGAGGGCATTGCGAAATCAGGTGGGGGAGGGTGTTACCTATTAGAAAAATGGCCCAACAAATCACGCCACAAACTCCCATGACTCATCTAGCATAGCCAAGGATGGGTCGAGGAGGAAGAGCCAACATGCTGCTAAGCCTGGCACACGCAGGTGCCAAGACGCCACACAAGGCTACTCAAGTCGTCAGGCCACGCCCATGCCTCAGGCGTGTGCCTTAG

mRNA sequence

ATGCTCCCATCGATCCTTGATCTTCGAACCACTCCACAAGCAAGATCGATCAAGTCAAGCTTGAATGATTCTGAACATTGTAAACTTCGGACAAAATGGATGGCTCCTTCTTGTAGTTCATATTGCATGATTGAGGTTCATCCATTCATATCACCAGTGGGCGCCCCACGGACGGCAGTCTCACCAGCTTGGAAGAAGGGTTGGAAGAGTTGCAAAAGAGATGATCAAGGAGCTGGGACAGACATGGGTAAAGAGGTAAGTACCCTCTTTGATGAAGTAGCCAACCTTAGGAAGTTTGTGGAGGGGGAACTCCACGACCTTTGCGGGGAAGTCGACGACATGAGGAAGGAGTGTTGGGCACGACATAGTATTAATGGTGGCACATCCACCAGCACCTCATCCGCTTTGCATGGCACCCATGGGGTGAAGGTGTCGAAGCCTGATACTTACGATGGTACAAGGAGCGCCACGGTGATTAAGAACTTCTTGTTCGGTCAAGAGCAATACTTTGAGGCCCTAGGCGTCGTCCATGATGGCACTAAGATTGCGAATACGCCCAAGTTCCTACGTGAGGCAGCACAATTATGGTGGCGTAGGAAGCATGCTAAGCGTGAGCGGGATGGATGCAACATCCGAACGTGGGGGCAATTCAACGTAGAATTCCGAAAGCACCTTGTTACCCACAATGTTGATATGGAAGCTCGAGGCAAACTAAGAGTTCACGACCCTAATGCTGGAATCAAAGGCCTATCTGGCAAAGATGCACTTTTTTATTTCTGCGATGGTCTCAAGGATTGGGCAAGGATAGAGCTTGATAGGCGGAGTGTGAACACGCTCGACGATGCCATAGCCACTGCTGAGATGTTCACTGACTTCTTGGCCAAAGGGAAGAAGACCACCAAGAATGAAGGAGAAGTGTCGGAGTCCAAGGAATTTGATGGGCATAAAGCTGAGGAGAGCCACAAGAATGAGAGAAAGAATGGAAAGGCTGCTGAAAAAAATAGAGGTAAGCCCTTCAAACGCCCTTGCTTCCTTTGCGATGGCCCACATTGGACAAGGGAGTGTCCACAAAAGAAGGCCTTAAGGGCCATGATTAGTGCCATGACCAAGGGCTTCTCTCCATGGGAGACTGGGCAGAAGGGGCAACTTTATGTTGACGTGGTGATCAACGGTGAAGTTCGAGAGGTGTTGCTCGACACAAGAGCATCACACAATTTCGTCGATCCAAGTGAGGCCGTAATCCTTGGTCTTAAGGTCGTTAGGGGAGGTGGAAAGATGAAGGCGGTGAACTCAAGAACCATAGAAGCTGAGGAACTTGTCAAAGATGTTCTCCTAAAGGTGGGAACATGGCGAGGTTTGATGGATGTCACCATGGTCCCAATGGATGACTACAAGAATCCGCATGGTCCCTTTGAAAAACAAGGAACTACTCGAGACGAAGGTGATGTCACACTTCGCTTGGTGAAGGGATGCACGAGAAGAAGAAGGCACTCAAAGAAGCCCCACGCAATGAGGGCATTGCGAAATCAGCCAAGGATGGGTCGAGGAGGAAGAGCCAACATGCTGCTAAGCCTGGCACACGCAGGTGCCAAGACGCCACACAAGGCTACTCAAGTCGTCAGGCCACGCCCATGCCTCAGGCGTGTGCCTTAG

Coding sequence (CDS)

ATGCTCCCATCGATCCTTGATCTTCGAACCACTCCACAAGCAAGATCGATCAAGTCAAGCTTGAATGATTCTGAACATTGTAAACTTCGGACAAAATGGATGGCTCCTTCTTGTAGTTCATATTGCATGATTGAGGTTCATCCATTCATATCACCAGTGGGCGCCCCACGGACGGCAGTCTCACCAGCTTGGAAGAAGGGTTGGAAGAGTTGCAAAAGAGATGATCAAGGAGCTGGGACAGACATGGGTAAAGAGGTAAGTACCCTCTTTGATGAAGTAGCCAACCTTAGGAAGTTTGTGGAGGGGGAACTCCACGACCTTTGCGGGGAAGTCGACGACATGAGGAAGGAGTGTTGGGCACGACATAGTATTAATGGTGGCACATCCACCAGCACCTCATCCGCTTTGCATGGCACCCATGGGGTGAAGGTGTCGAAGCCTGATACTTACGATGGTACAAGGAGCGCCACGGTGATTAAGAACTTCTTGTTCGGTCAAGAGCAATACTTTGAGGCCCTAGGCGTCGTCCATGATGGCACTAAGATTGCGAATACGCCCAAGTTCCTACGTGAGGCAGCACAATTATGGTGGCGTAGGAAGCATGCTAAGCGTGAGCGGGATGGATGCAACATCCGAACGTGGGGGCAATTCAACGTAGAATTCCGAAAGCACCTTGTTACCCACAATGTTGATATGGAAGCTCGAGGCAAACTAAGAGTTCACGACCCTAATGCTGGAATCAAAGGCCTATCTGGCAAAGATGCACTTTTTTATTTCTGCGATGGTCTCAAGGATTGGGCAAGGATAGAGCTTGATAGGCGGAGTGTGAACACGCTCGACGATGCCATAGCCACTGCTGAGATGTTCACTGACTTCTTGGCCAAAGGGAAGAAGACCACCAAGAATGAAGGAGAAGTGTCGGAGTCCAAGGAATTTGATGGGCATAAAGCTGAGGAGAGCCACAAGAATGAGAGAAAGAATGGAAAGGCTGCTGAAAAAAATAGAGGTAAGCCCTTCAAACGCCCTTGCTTCCTTTGCGATGGCCCACATTGGACAAGGGAGTGTCCACAAAAGAAGGCCTTAAGGGCCATGATTAGTGCCATGACCAAGGGCTTCTCTCCATGGGAGACTGGGCAGAAGGGGCAACTTTATGTTGACGTGGTGATCAACGGTGAAGTTCGAGAGGTGTTGCTCGACACAAGAGCATCACACAATTTCGTCGATCCAAGTGAGGCCGTAATCCTTGGTCTTAAGGTCGTTAGGGGAGGTGGAAAGATGAAGGCGGTGAACTCAAGAACCATAGAAGCTGAGGAACTTGTCAAAGATGTTCTCCTAAAGGTGGGAACATGGCGAGGTTTGATGGATGTCACCATGGTCCCAATGGATGACTACAAGAATCCGCATGGTCCCTTTGAAAAACAAGGAACTACTCGAGACGAAGGTGATGTCACACTTCGCTTGGTGAAGGGATGCACGAGAAGAAGAAGGCACTCAAAGAAGCCCCACGCAATGAGGGCATTGCGAAATCAGCCAAGGATGGGTCGAGGAGGAAGAGCCAACATGCTGCTAAGCCTGGCACACGCAGGTGCCAAGACGCCACACAAGGCTACTCAAGTCGTCAGGCCACGCCCATGCCTCAGGCGTGTGCCTTAG

Protein sequence

MLPSILDLRTTPQARSIKSSLNDSEHCKLRTKWMAPSCSSYCMIEVHPFISPVGAPRTAVSPAWKKGWKSCKRDDQGAGTDMGKEVSTLFDEVANLRKFVEGELHDLCGEVDDMRKECWARHSINGGTSTSTSSALHGTHGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLREAAQLWWRRKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLRVHDPNAGIKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLAKGKKTTKNEGEVSESKEFDGHKAEESHKNERKNGKAAEKNRGKPFKRPCFLCDGPHWTRECPQKKALRAMISAMTKGFSPWETGQKGQLYVDVVINGEVREVLLDTRASHNFVDPSEAVILGLKVVRGGGKMKAVNSRTIEAEELVKDVLLKVGTWRGLMDVTMVPMDDYKNPHGPFEKQGTTRDEGDVTLRLVKGCTRRRRHSKKPHAMRALRNQPRMGRGGRANMLLSLAHAGAKTPHKATQVVRPRPCLRRVP
Homology
BLAST of CmUC09G174010 vs. NCBI nr
Match: KAA0035961.1 (uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK30442.1 uncharacterized protein E5676_scaffold349G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 345.5 bits (885), Expect = 8.4e-91
Identity = 192/424 (45.28%), Postives = 252/424 (59.43%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGEVDDMRKECWARHSINGGTSTSTSSALHG 138
           G   GKE+  +  EV NLRKFVE ELH L   VD++R E  +RH+ NG  STSTS  + G
Sbjct: 27  GDSHGKEMYDILVEVTNLRKFVEEELHALRKNVDEVRAEWHSRHASNGNASTSTSCTMVG 86

Query: 139 THGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLREAAQLWWR 198
           TH +KV KPDTY+GTR+AT+++NFLFG EQY++ALG++ DG KIAN P FLRE+AQLWWR
Sbjct: 87  THNIKVPKPDTYNGTRNATMVENFLFGLEQYYKALGIIDDGAKIANAPNFLRESAQLWWR 146

Query: 199 RKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLR--------------VHDPN 258
           RKHA+ E+D   ++TW QF  E RKH V HN DMEARGKLR                   
Sbjct: 147 RKHAEWEKDRTILQTWEQFKAELRKHFVPHNADMEARGKLRRLRQIGSIPDYIKEFTTLM 206

Query: 259 AGIKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLAKGKKTTKNEG 318
             I+ LS KDALF+F D LKDWA+IELDRR+V TLDDAIA A    D  +K KK   +EG
Sbjct: 207 LEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRTLDDAIAAAGALIDIYSKEKKRRVDEG 266

Query: 319 EVSESKEFDGHKAEESHKNERKNGKAAEKNRGKPFKRPCFLCDGPHWTRECPQKKALRAM 378
           E  E K+      E + K + K GKA   N+       CFLC GPHWTR+CP+K  L A+
Sbjct: 267 EAFEPKK------EGNSKQDGKYGKAPFANK-DTIPPTCFLCKGPHWTRDCPKKNKLSAI 326

Query: 379 IS----------------------AMTKGFSPWETGQKGQLYVDVVINGEVREVLLDTRA 438
           ++                      +  K  S  E  + G LYVD   N +    +LD  A
Sbjct: 327 VANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLLYVDATFNNKAALAMLDAGA 386

Query: 439 SHNFVDPSEAVILGLKVV-RGGGKMKAVNSRTIEAEELVKDVLLKVGTWRGLMDVTMVPM 466
           +HN +DP EA  LGL+   R   ++K +++++++     +DV  +VG W+G ++  +  +
Sbjct: 387 THNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLNFLIAHL 443

BLAST of CmUC09G174010 vs. NCBI nr
Match: KAA0035960.1 (uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK30443.1 uncharacterized protein E5676_scaffold349G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 1.4e-82
Identity = 177/370 (47.84%), Postives = 218/370 (58.92%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGEVDDMRKECWARHSINGGTSTSTSSALHG 138
           G   GKE+  L  EV NLRKFVE ELH L   VD++R EC +RH+ NG  STSTS  + G
Sbjct: 27  GDSHGKEMYDLLVEVTNLRKFVEEELHALRKNVDEVRAECHSRHASNGNASTSTSCTVVG 86

Query: 139 THGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLREAAQLWWR 198
           TH +KV KPD Y+GTR+AT+++NFLFG EQY++ALG+V DG KIAN P FL E+AQLWW 
Sbjct: 87  THNIKVPKPDMYNGTRNATMVENFLFGLEQYYKALGIVDDGAKIANAPNFLHESAQLWWH 146

Query: 199 RKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLR--------------VHDPN 258
           RKHA+ E+D   + TW QF  E RKH V HN +MEARGKLR                   
Sbjct: 147 RKHAEWEKDRTILHTWRQFKAELRKHFVLHNANMEARGKLRRLRQIGSIPDYIKEFTTLM 206

Query: 259 AGIKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLAKGKKTTKNEG 318
             I+ LS KDALF+F DGLKDWA+IELDRR+V TLDDAIA A+   D   K KKT  +EG
Sbjct: 207 LEIEDLSDKDALFHFRDGLKDWAKIELDRRNVRTLDDAIAAAKALIDIYFKEKKTRVDEG 266

Query: 319 EVSESKEFDGHKAEESHKNERKNGKAAEKNRGKPFKRPCFLCDGPHWTRECPQKKALRAM 378
           E  E KE++        K + K GK    NR       CFLC GPH TRECP++  L A+
Sbjct: 267 EAFEPKEWNS-------KQDEKYGKTPFANRDTT-PPTCFLCKGPHRTRECPKRNKLSAI 326

Query: 379 IS----------------------AMTKGFSPWETGQKGQLYVDVVINGEVREVLLDTRA 413
           ++                      +  K  S  E  + G LYVD   N +    +LD  A
Sbjct: 327 VANPREEEEVPIKGTAQLGAIRYLSAMKSDSSKEPQEGGWLYVDATFNNKAALAMLDAGA 386

BLAST of CmUC09G174010 vs. NCBI nr
Match: KAA0040659.1 (uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 309.3 bits (791), Expect = 6.7e-80
Identity = 190/461 (41.21%), Postives = 252/461 (54.66%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGE-------VDDMRKECWARHSINGGTSTS 138
           G    KE+  L   V  L+ FVEGELHDL  +       +D +  EC ++H  +   STS
Sbjct: 91  GRTFQKELRELASTVTTLKAFVEGELHDLHTKSISFETRLDALCVECRSKHLGSNAPSTS 150

Query: 139 TSSALHGTHGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLRE 198
           T     GT  +KV KPD Y+G R+ATV+ NFLFG E+YF ALGV  D  +I + P FLR+
Sbjct: 151 THPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYFVALGVRDDEARINHAPTFLRD 210

Query: 199 AAQLWWRRKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLRVHDPNAG----- 258
           AAQLWWRRK+A  ++ G  I +W QF  E RKH V HN ++E+RGKLR            
Sbjct: 211 AAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNAEIESRGKLRRLRHTGSILDYV 270

Query: 259 ---------IKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLA--K 318
                    I  L  K+ALF F DGLKDWA+IELDRR+V TLDDAIA AE   D+ A  K
Sbjct: 271 KEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAVAETLVDYSAQSK 330

Query: 319 GKK--TTKNEGEVSESKEFDGHKAEESHKNERKNGKAAEKNRGKPFK--RPCFLCDGPHW 378
           GKK    K+ G+  ++K F      +    + KNGK    +RG+     +PCF+C GPHW
Sbjct: 331 GKKPGPEKHGGKSDKTKNFGRKDGGKVKTFQWKNGKNDGAHRGESSNPPKPCFICKGPHW 390

Query: 379 TRECPQKKALRAMISAMTK------------------GFSPWET--GQKGQLYVDVVING 438
           TR+CP +KAL A+++   +                  G    ET    KG LY  + I G
Sbjct: 391 TRDCPNRKALNALVAKFQEIKQVEDAPGPQIGSMQQIGVMKKETTVEHKGLLYGSIRIEG 450

Query: 439 EVREVLLDTRASHNFVDPSEAVILGLKVVRGGGKMKAVNSRTIEAEELVKDVLLKVGTWR 491
           +    + DT ASHNF+D  EA  LGLK     G +K VN++      + K VL+K+G W+
Sbjct: 451 KEATTMFDTGASHNFIDVQEAKRLGLKFKEETGIVKVVNAKEQAIHGVAKGVLVKIGDWQ 510

BLAST of CmUC09G174010 vs. NCBI nr
Match: KAA0042140.1 (uncharacterized protein E6C27_scaffold67G006290 [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 8.7e-80
Identity = 194/463 (41.90%), Postives = 257/463 (55.51%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGE-------VDDMRKECWARHSINGGTSTS 138
           G    KE+  L   V  L+ FVEGELHDL  +       +D +  EC ++H  +   STS
Sbjct: 244 GRTFQKELKELASTVTTLKAFVEGELHDLHTKSISFETRLDALCVECHSKHLGSNAPSTS 303

Query: 139 TSSALHGTHGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLRE 198
           T     GT  +KV KPD Y+G R+ATV+ NFLFG E+YF ALGV  D  +I + P FLR+
Sbjct: 304 THPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYFVALGVRDDEARINHAPTFLRD 363

Query: 199 AAQLWWRRKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLRVHDPNAG----- 258
            AQLWWR K+A  ++ G  I +W QF  E RKH V HN ++E+RGKLR H  + G     
Sbjct: 364 VAQLWWRHKYA--DQSGNAIHSWEQFKTELRKHFVPHNAEIESRGKLR-HLRHIGSILDY 423

Query: 259 ----------IKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLA-- 318
                     I  L  K+ALF F DGLKDWA+IELDRR+V TLDDAIA AE   D+ A  
Sbjct: 424 VKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAAETLVDYSAQS 483

Query: 319 KGKK--TTKNEGEVSESKEFDGHKAEESHKN-ERKNGKAAEKNRGKPFK--RPCFLCDGP 378
           KGKK    K+ G+  ++K F GHK     K  + KNGK    +RG+     +PCF+C GP
Sbjct: 484 KGKKPGPEKHGGKPDKTKNF-GHKDGGKVKTFQWKNGKNDGAHRGESSNPPKPCFICKGP 543

Query: 379 HWTRECPQKKALRAMISAMTK------------------GFSPWET--GQKGQLYVDVVI 438
           HWTR+CP +KAL A+++   +                  G    ET    KG LY ++ I
Sbjct: 544 HWTRDCPNRKALNALVAKFQEVKQVEDAPGPQIGSMQQIGVMKKETTVEHKGLLYGNIRI 603

Query: 439 NGEVREVLLDTRASHNFVDPSEAVILGLKVVRGGGKMKAVNSRTIEAEELVKDVLLKVGT 491
            G+    + DT ASHNF+D  EA  LGLK     G +K VN++      + K VL+K+G 
Sbjct: 604 EGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGIVKVVNAKEQAIHGVAKGVLVKIGD 663

BLAST of CmUC09G174010 vs. NCBI nr
Match: TYK18079.1 (uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 8.7e-80
Identity = 194/463 (41.90%), Postives = 257/463 (55.51%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGE-------VDDMRKECWARHSINGGTSTS 138
           G    KE+  L   V  L+ FVEGELHDL  +       +D +  EC ++H  +   STS
Sbjct: 181 GRTFQKELKELASTVTTLKAFVEGELHDLHTKSISFETRLDALCVECHSKHLGSNAPSTS 240

Query: 139 TSSALHGTHGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLRE 198
           T     GT  +KV KPD Y+G R+ATV+ NFLFG E+YF ALGV  D  +I + P FLR+
Sbjct: 241 THPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYFVALGVRDDEARINHAPTFLRD 300

Query: 199 AAQLWWRRKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLRVHDPNAG----- 258
            AQLWWR K+A  ++ G  I +W QF  E RKH V HN ++E+RGKLR H  + G     
Sbjct: 301 VAQLWWRHKYA--DQSGNAIHSWEQFKTELRKHFVPHNAEIESRGKLR-HLRHIGSILDY 360

Query: 259 ----------IKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLA-- 318
                     I  L  K+ALF F DGLKDWA+IELDRR+V TLDDAIA AE   D+ A  
Sbjct: 361 VKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAAETLVDYSAQS 420

Query: 319 KGKK--TTKNEGEVSESKEFDGHKAEESHKN-ERKNGKAAEKNRGKPFK--RPCFLCDGP 378
           KGKK    K+ G+  ++K F GHK     K  + KNGK    +RG+     +PCF+C GP
Sbjct: 421 KGKKPGPEKHGGKPDKTKNF-GHKDGGKVKTFQWKNGKNDGAHRGESSNPPKPCFICKGP 480

Query: 379 HWTRECPQKKALRAMISAMTK------------------GFSPWET--GQKGQLYVDVVI 438
           HWTR+CP +KAL A+++   +                  G    ET    KG LY ++ I
Sbjct: 481 HWTRDCPNRKALNALVAKFQEVKQVEDAPGPQIGSMQQIGVMKKETTVEHKGLLYGNIRI 540

Query: 439 NGEVREVLLDTRASHNFVDPSEAVILGLKVVRGGGKMKAVNSRTIEAEELVKDVLLKVGT 491
            G+    + DT ASHNF+D  EA  LGLK     G +K VN++      + K VL+K+G 
Sbjct: 541 EGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGIVKVVNAKEQAIHGVAKGVLVKIGD 600

BLAST of CmUC09G174010 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.1e-91
Identity = 192/424 (45.28%), Postives = 252/424 (59.43%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGEVDDMRKECWARHSINGGTSTSTSSALHG 138
           G   GKE+  +  EV NLRKFVE ELH L   VD++R E  +RH+ NG  STSTS  + G
Sbjct: 27  GDSHGKEMYDILVEVTNLRKFVEEELHALRKNVDEVRAEWHSRHASNGNASTSTSCTMVG 86

Query: 139 THGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLREAAQLWWR 198
           TH +KV KPDTY+GTR+AT+++NFLFG EQY++ALG++ DG KIAN P FLRE+AQLWWR
Sbjct: 87  THNIKVPKPDTYNGTRNATMVENFLFGLEQYYKALGIIDDGAKIANAPNFLRESAQLWWR 146

Query: 199 RKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLR--------------VHDPN 258
           RKHA+ E+D   ++TW QF  E RKH V HN DMEARGKLR                   
Sbjct: 147 RKHAEWEKDRTILQTWEQFKAELRKHFVPHNADMEARGKLRRLRQIGSIPDYIKEFTTLM 206

Query: 259 AGIKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLAKGKKTTKNEG 318
             I+ LS KDALF+F D LKDWA+IELDRR+V TLDDAIA A    D  +K KK   +EG
Sbjct: 207 LEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRTLDDAIAAAGALIDIYSKEKKRRVDEG 266

Query: 319 EVSESKEFDGHKAEESHKNERKNGKAAEKNRGKPFKRPCFLCDGPHWTRECPQKKALRAM 378
           E  E K+      E + K + K GKA   N+       CFLC GPHWTR+CP+K  L A+
Sbjct: 267 EAFEPKK------EGNSKQDGKYGKAPFANK-DTIPPTCFLCKGPHWTRDCPKKNKLSAI 326

Query: 379 IS----------------------AMTKGFSPWETGQKGQLYVDVVINGEVREVLLDTRA 438
           ++                      +  K  S  E  + G LYVD   N +    +LD  A
Sbjct: 327 VANPREEEEVPIKGTAQLGGIRYLSAMKSESSKEPQEGGLLYVDATFNNKAALAMLDAGA 386

Query: 439 SHNFVDPSEAVILGLKVV-RGGGKMKAVNSRTIEAEELVKDVLLKVGTWRGLMDVTMVPM 466
           +HN +DP EA  LGL+   R   ++K +++++++     +DV  +VG W+G ++  +  +
Sbjct: 387 THNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLNFLIAHL 443

BLAST of CmUC09G174010 vs. ExPASy TrEMBL
Match: A0A5A7SY30 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00560 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.9e-83
Identity = 177/370 (47.84%), Postives = 218/370 (58.92%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGEVDDMRKECWARHSINGGTSTSTSSALHG 138
           G   GKE+  L  EV NLRKFVE ELH L   VD++R EC +RH+ NG  STSTS  + G
Sbjct: 27  GDSHGKEMYDLLVEVTNLRKFVEEELHALRKNVDEVRAECHSRHASNGNASTSTSCTVVG 86

Query: 139 THGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLREAAQLWWR 198
           TH +KV KPD Y+GTR+AT+++NFLFG EQY++ALG+V DG KIAN P FL E+AQLWW 
Sbjct: 87  THNIKVPKPDMYNGTRNATMVENFLFGLEQYYKALGIVDDGAKIANAPNFLHESAQLWWH 146

Query: 199 RKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLR--------------VHDPN 258
           RKHA+ E+D   + TW QF  E RKH V HN +MEARGKLR                   
Sbjct: 147 RKHAEWEKDRTILHTWRQFKAELRKHFVLHNANMEARGKLRRLRQIGSIPDYIKEFTTLM 206

Query: 259 AGIKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLAKGKKTTKNEG 318
             I+ LS KDALF+F DGLKDWA+IELDRR+V TLDDAIA A+   D   K KKT  +EG
Sbjct: 207 LEIEDLSDKDALFHFRDGLKDWAKIELDRRNVRTLDDAIAAAKALIDIYFKEKKTRVDEG 266

Query: 319 EVSESKEFDGHKAEESHKNERKNGKAAEKNRGKPFKRPCFLCDGPHWTRECPQKKALRAM 378
           E  E KE++        K + K GK    NR       CFLC GPH TRECP++  L A+
Sbjct: 267 EAFEPKEWNS-------KQDEKYGKTPFANRDTT-PPTCFLCKGPHRTRECPKRNKLSAI 326

Query: 379 IS----------------------AMTKGFSPWETGQKGQLYVDVVINGEVREVLLDTRA 413
           ++                      +  K  S  E  + G LYVD   N +    +LD  A
Sbjct: 327 VANPREEEEVPIKGTAQLGAIRYLSAMKSDSSKEPQEGGWLYVDATFNNKAALAMLDAGA 386

BLAST of CmUC09G174010 vs. ExPASy TrEMBL
Match: A0A5A7THC0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00130 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 3.2e-80
Identity = 190/461 (41.21%), Postives = 252/461 (54.66%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGE-------VDDMRKECWARHSINGGTSTS 138
           G    KE+  L   V  L+ FVEGELHDL  +       +D +  EC ++H  +   STS
Sbjct: 91  GRTFQKELRELASTVTTLKAFVEGELHDLHTKSISFETRLDALCVECRSKHLGSNAPSTS 150

Query: 139 TSSALHGTHGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLRE 198
           T     GT  +KV KPD Y+G R+ATV+ NFLFG E+YF ALGV  D  +I + P FLR+
Sbjct: 151 THPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYFVALGVRDDEARINHAPTFLRD 210

Query: 199 AAQLWWRRKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLRVHDPNAG----- 258
           AAQLWWRRK+A  ++ G  I +W QF  E RKH V HN ++E+RGKLR            
Sbjct: 211 AAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNAEIESRGKLRRLRHTGSILDYV 270

Query: 259 ---------IKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLA--K 318
                    I  L  K+ALF F DGLKDWA+IELDRR+V TLDDAIA AE   D+ A  K
Sbjct: 271 KEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAVAETLVDYSAQSK 330

Query: 319 GKK--TTKNEGEVSESKEFDGHKAEESHKNERKNGKAAEKNRGKPFK--RPCFLCDGPHW 378
           GKK    K+ G+  ++K F      +    + KNGK    +RG+     +PCF+C GPHW
Sbjct: 331 GKKPGPEKHGGKSDKTKNFGRKDGGKVKTFQWKNGKNDGAHRGESSNPPKPCFICKGPHW 390

Query: 379 TRECPQKKALRAMISAMTK------------------GFSPWET--GQKGQLYVDVVING 438
           TR+CP +KAL A+++   +                  G    ET    KG LY  + I G
Sbjct: 391 TRDCPNRKALNALVAKFQEIKQVEDAPGPQIGSMQQIGVMKKETTVEHKGLLYGSIRIEG 450

Query: 439 EVREVLLDTRASHNFVDPSEAVILGLKVVRGGGKMKAVNSRTIEAEELVKDVLLKVGTWR 491
           +    + DT ASHNF+D  EA  LGLK     G +K VN++      + K VL+K+G W+
Sbjct: 451 KEATTMFDTGASHNFIDVQEAKRLGLKFKEETGIVKVVNAKEQAIHGVAKGVLVKIGDWQ 510

BLAST of CmUC09G174010 vs. ExPASy TrEMBL
Match: A0A5D3D3V4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004150 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.2e-80
Identity = 194/463 (41.90%), Postives = 257/463 (55.51%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGE-------VDDMRKECWARHSINGGTSTS 138
           G    KE+  L   V  L+ FVEGELHDL  +       +D +  EC ++H  +   STS
Sbjct: 181 GRTFQKELKELASTVTTLKAFVEGELHDLHTKSISFETRLDALCVECHSKHLGSNAPSTS 240

Query: 139 TSSALHGTHGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLRE 198
           T     GT  +KV KPD Y+G R+ATV+ NFLFG E+YF ALGV  D  +I + P FLR+
Sbjct: 241 THPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYFVALGVRDDEARINHAPTFLRD 300

Query: 199 AAQLWWRRKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLRVHDPNAG----- 258
            AQLWWR K+A  ++ G  I +W QF  E RKH V HN ++E+RGKLR H  + G     
Sbjct: 301 VAQLWWRHKYA--DQSGNAIHSWEQFKTELRKHFVPHNAEIESRGKLR-HLRHIGSILDY 360

Query: 259 ----------IKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLA-- 318
                     I  L  K+ALF F DGLKDWA+IELDRR+V TLDDAIA AE   D+ A  
Sbjct: 361 VKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAAETLVDYSAQS 420

Query: 319 KGKK--TTKNEGEVSESKEFDGHKAEESHKN-ERKNGKAAEKNRGKPFK--RPCFLCDGP 378
           KGKK    K+ G+  ++K F GHK     K  + KNGK    +RG+     +PCF+C GP
Sbjct: 421 KGKKPGPEKHGGKPDKTKNF-GHKDGGKVKTFQWKNGKNDGAHRGESSNPPKPCFICKGP 480

Query: 379 HWTRECPQKKALRAMISAMTK------------------GFSPWET--GQKGQLYVDVVI 438
           HWTR+CP +KAL A+++   +                  G    ET    KG LY ++ I
Sbjct: 481 HWTRDCPNRKALNALVAKFQEVKQVEDAPGPQIGSMQQIGVMKKETTVEHKGLLYGNIRI 540

Query: 439 NGEVREVLLDTRASHNFVDPSEAVILGLKVVRGGGKMKAVNSRTIEAEELVKDVLLKVGT 491
            G+    + DT ASHNF+D  EA  LGLK     G +K VN++      + K VL+K+G 
Sbjct: 541 EGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGIVKVVNAKEQAIHGVAKGVLVKIGD 600

BLAST of CmUC09G174010 vs. ExPASy TrEMBL
Match: A0A5A7TFP3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006290 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.2e-80
Identity = 194/463 (41.90%), Postives = 257/463 (55.51%), Query Frame = 0

Query: 79  GTDMGKEVSTLFDEVANLRKFVEGELHDLCGE-------VDDMRKECWARHSINGGTSTS 138
           G    KE+  L   V  L+ FVEGELHDL  +       +D +  EC ++H  +   STS
Sbjct: 244 GRTFQKELKELASTVTTLKAFVEGELHDLHTKSISFETRLDALCVECHSKHLGSNAPSTS 303

Query: 139 TSSALHGTHGVKVSKPDTYDGTRSATVIKNFLFGQEQYFEALGVVHDGTKIANTPKFLRE 198
           T     GT  +KV KPD Y+G R+ATV+ NFLFG E+YF ALGV  D  +I + P FLR+
Sbjct: 304 THPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYFVALGVRDDEARINHAPTFLRD 363

Query: 199 AAQLWWRRKHAKRERDGCNIRTWGQFNVEFRKHLVTHNVDMEARGKLRVHDPNAG----- 258
            AQLWWR K+A  ++ G  I +W QF  E RKH V HN ++E+RGKLR H  + G     
Sbjct: 364 VAQLWWRHKYA--DQSGNAIHSWEQFKTELRKHFVPHNAEIESRGKLR-HLRHIGSILDY 423

Query: 259 ----------IKGLSGKDALFYFCDGLKDWARIELDRRSVNTLDDAIATAEMFTDFLA-- 318
                     I  L  K+ALF F DGLKDWA+IELDRR+V TLDDAIA AE   D+ A  
Sbjct: 424 VKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAAETLVDYSAQS 483

Query: 319 KGKK--TTKNEGEVSESKEFDGHKAEESHKN-ERKNGKAAEKNRGKPFK--RPCFLCDGP 378
           KGKK    K+ G+  ++K F GHK     K  + KNGK    +RG+     +PCF+C GP
Sbjct: 484 KGKKPGPEKHGGKPDKTKNF-GHKDGGKVKTFQWKNGKNDGAHRGESSNPPKPCFICKGP 543

Query: 379 HWTRECPQKKALRAMISAMTK------------------GFSPWET--GQKGQLYVDVVI 438
           HWTR+CP +KAL A+++   +                  G    ET    KG LY ++ I
Sbjct: 544 HWTRDCPNRKALNALVAKFQEVKQVEDAPGPQIGSMQQIGVMKKETTVEHKGLLYGNIRI 603

Query: 439 NGEVREVLLDTRASHNFVDPSEAVILGLKVVRGGGKMKAVNSRTIEAEELVKDVLLKVGT 491
            G+    + DT ASHNF+D  EA  LGLK     G +K VN++      + K VL+K+G 
Sbjct: 604 EGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGIVKVVNAKEQAIHGVAKGVLVKIGD 663

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0035961.18.4e-9145.28uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK3... [more]
KAA0035960.11.4e-8247.84uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK3... [more]
KAA0040659.16.7e-8041.21uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa][more]
KAA0042140.18.7e-8041.90uncharacterized protein E6C27_scaffold67G006290 [Cucumis melo var. makuwa][more]
TYK18079.18.7e-8041.90uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T2W84.1e-9145.28Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7SY306.9e-8347.84Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7THC03.2e-8041.21Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5D3D3V44.2e-8041.90Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7TFP34.2e-8041.90Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 299..360
e-value: 3.1E-5
score: 24.4
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 363..469
e-value: 2.4E-8
score: 35.7
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 380..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 529..550
NoneNo IPR availablePANTHERPTHR34482:SF18RETROTRANSPOSON GAG DOMAIN, ASPARTIC PEPTIDASE DOMAIN PROTEIN-RELATEDcoord: 141..341
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 141..341
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 385..464
e-value: 1.14625E-6
score: 45.02

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G174010.1CmUC09G174010.1mRNA