CmUC09G172130 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G172130
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionProlamin_like domain-containing protein
LocationCmU531Chr09: 13149069 .. 13149440 (+)
RNA-Seq ExpressionCmUC09G172130
SyntenyCmUC09G172130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAAATCGGCTCAATTTTTCGGATTCTTCCTCTCTGCCCTAGCAATTTCATCGGTTTTCGCCGTTAGAAAGATCCCGGAGGCGATTTATTCAGCCGATTGGTCGGCGGCAGTGTGTTGGGACGCAATAAACCCGGTGGAAGGTTGCCAGGACGAGATCGACACGGCGATGAAGAGTAATGAGATCGAGGTGAGTCACGATTGCTGTAGAGTGATTTTACATGGACTGCCGGAGAAATGCGCCGCCGTGGTTTTCTCCAATGGCGGAGAGTTTTCGCCGGAGATTAGCGGTGCGGTTAACGAATATTGCGACGGAATGGGAATTACTCCGCCGGTGCTTGAGACGGAGGATAAAGTAGAAGAAAGTTGA

mRNA sequence

ATGTCGAAATCGGCTCAATTTTTCGGATTCTTCCTCTCTGCCCTAGCAATTTCATCGGTTTTCGCCGTTAGAAAGATCCCGGAGGCGATTTATTCAGCCGATTGGTCGGCGGCAGTGTGTTGGGACGCAATAAACCCGGTGGAAGGTTGCCAGGACGAGATCGACACGGCGATGAAGAGTAATGAGATCGAGGTGAGTCACGATTGCTGTAGAGTGATTTTACATGGACTGCCGGAGAAATGCGCCGCCGTGGTTTTCTCCAATGGCGGAGAGTTTTCGCCGGAGATTAGCGGTGCGGTTAACGAATATTGCGACGGAATGGGAATTACTCCGCCGGTGCTTGAGACGGAGGATAAAGTAGAAGAAAGTTGA

Coding sequence (CDS)

ATGTCGAAATCGGCTCAATTTTTCGGATTCTTCCTCTCTGCCCTAGCAATTTCATCGGTTTTCGCCGTTAGAAAGATCCCGGAGGCGATTTATTCAGCCGATTGGTCGGCGGCAGTGTGTTGGGACGCAATAAACCCGGTGGAAGGTTGCCAGGACGAGATCGACACGGCGATGAAGAGTAATGAGATCGAGGTGAGTCACGATTGCTGTAGAGTGATTTTACATGGACTGCCGGAGAAATGCGCCGCCGTGGTTTTCTCCAATGGCGGAGAGTTTTCGCCGGAGATTAGCGGTGCGGTTAACGAATATTGCGACGGAATGGGAATTACTCCGCCGGTGCTTGAGACGGAGGATAAAGTAGAAGAAAGTTGA

Protein sequence

MSKSAQFFGFFLSALAISSVFAVRKIPEAIYSADWSAAVCWDAINPVEGCQDEIDTAMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISGAVNEYCDGMGITPPVLETEDKVEES
Homology
BLAST of CmUC09G172130 vs. NCBI nr
Match: KAA0038539.1 (hypothetical protein E6C27_scaffold92G00660 [Cucumis melo var. makuwa] >TYK31136.1 hypothetical protein E5676_scaffold455G004160 [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47
Identity = 102/128 (79.69%), Postives = 113/128 (88.28%), Query Frame = 0

Query: 1   MSKSAQFFGFFLSALAIS----SVFAVRKIPEAIYSADWSAAVCWDAINPVEGCQDEIDT 60
           MSKS +FFGFFL ALAIS    S FAVRKI EA+YSAD     CWDAIN VEGCQ++IDT
Sbjct: 1   MSKSFRFFGFFLCALAISSSFQSAFAVRKIAEAVYSAD-----CWDAINAVEGCQNQIDT 60

Query: 61  AMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISGAVNEYCDGMGITPPVLET 120
           AMKSNEIEVS+DCC+VILHG+PEKCAAVVFS+GGEFSPE+SGAVNEYCDGMGITPPVLET
Sbjct: 61  AMKSNEIEVSYDCCKVILHGMPEKCAAVVFSSGGEFSPEVSGAVNEYCDGMGITPPVLET 120

Query: 121 ED-KVEES 124
           ED KV+E+
Sbjct: 121 EDTKVDEN 123

BLAST of CmUC09G172130 vs. NCBI nr
Match: XP_022931003.1 (uncharacterized protein LOC111437329 [Cucurbita moschata] >KAG6606231.1 hypothetical protein SDJN03_03548, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 95/124 (76.61%), Postives = 102/124 (82.26%), Query Frame = 0

Query: 1   MSKSAQFFGFFLSALAIS------SVFAVRKIPEAIYSADWSAAVCWDAINPVEGCQDEI 60
           M KS +F GF L ALAIS      S FA+R IPEA+ SADWSAA CWDAI  VEGCQDEI
Sbjct: 1   MLKSVRFVGFLL-ALAISSSIQSESAFALRNIPEALNSADWSAATCWDAITAVEGCQDEI 60

Query: 61  DTAMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISGAVNEYCDGMGITPPVL 119
           D AMKSNEIEVS DCCR ILHGLP+KCAA VFS+GGEFS EISGAVNEYCDGMGITPPVL
Sbjct: 61  DMAMKSNEIEVSRDCCRAILHGLPDKCAAEVFSSGGEFSAEISGAVNEYCDGMGITPPVL 120

BLAST of CmUC09G172130 vs. NCBI nr
Match: KAG6571831.1 (hypothetical protein SDJN03_28559, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179.1 bits (453), Expect = 2.3e-41
Identity = 90/118 (76.27%), Postives = 99/118 (83.90%), Query Frame = 0

Query: 1   MSKSAQFFGFFLSALAISSV----FAVRKIPEAIYSADWSAAVCWDAINPVEGCQDEIDT 60
           MSKS +FFGFFL AL ISS+    FA+RK P+AI SADWS A C DA+N VEGCQ EID 
Sbjct: 1   MSKSVRFFGFFLLALTISSLIHSAFALRKFPKAIDSADWSTAACLDALNAVEGCQGEIDM 60

Query: 61  AMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISGAVNEYCDGMGITPPVL 115
           A+ SNEIEVS++CCRVILHGLPEKCAAVVFS+GGE S EISGAV EYCDGMGITPPVL
Sbjct: 61  AINSNEIEVSYNCCRVILHGLPEKCAAVVFSSGGESSSEISGAVKEYCDGMGITPPVL 118

BLAST of CmUC09G172130 vs. NCBI nr
Match: KAE8652857.1 (hypothetical protein Csa_023774, partial [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 5.4e-22
Identity = 52/61 (85.25%), Postives = 60/61 (98.36%), Query Frame = 0

Query: 64  EVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISGAVNEYCDGMGITPPVLETED-KVEE 123
           +VS+DCC+VILHG+PEKCAAVVFS+GGEFSP++SGAVNEYCDGMGITPPVLETED KVEE
Sbjct: 6   KVSYDCCKVILHGMPEKCAAVVFSSGGEFSPDVSGAVNEYCDGMGITPPVLETEDTKVEE 65

BLAST of CmUC09G172130 vs. NCBI nr
Match: PPR81469.1 (hypothetical protein GOBAR_AA39249 [Gossypium barbadense])

HSP 1 Score: 61.6 bits (148), Expect = 5.4e-06
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 0

Query: 39  VCWDAINPVEGCQDEIDTAMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISG 98
           VCW  IN   GC+ EI  ++   +I++S+ CC  +  G+  KC   +F N G FSPE   
Sbjct: 35  VCWAQINKANGCEHEIYASLVKKKIKLSYGCCEAV-QGMSSKCKNWMF-NHGRFSPEFGD 94

Query: 99  AVNEYCDGMGITPP 113
            +  YC  +G+T P
Sbjct: 95  QIKGYCATLGVTLP 106

BLAST of CmUC09G172130 vs. ExPASy TrEMBL
Match: A0A5A7TB28 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004160 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.2e-48
Identity = 102/128 (79.69%), Postives = 113/128 (88.28%), Query Frame = 0

Query: 1   MSKSAQFFGFFLSALAIS----SVFAVRKIPEAIYSADWSAAVCWDAINPVEGCQDEIDT 60
           MSKS +FFGFFL ALAIS    S FAVRKI EA+YSAD     CWDAIN VEGCQ++IDT
Sbjct: 1   MSKSFRFFGFFLCALAISSSFQSAFAVRKIAEAVYSAD-----CWDAINAVEGCQNQIDT 60

Query: 61  AMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISGAVNEYCDGMGITPPVLET 120
           AMKSNEIEVS+DCC+VILHG+PEKCAAVVFS+GGEFSPE+SGAVNEYCDGMGITPPVLET
Sbjct: 61  AMKSNEIEVSYDCCKVILHGMPEKCAAVVFSSGGEFSPEVSGAVNEYCDGMGITPPVLET 120

Query: 121 ED-KVEES 124
           ED KV+E+
Sbjct: 121 EDTKVDEN 123

BLAST of CmUC09G172130 vs. ExPASy TrEMBL
Match: A0A0A0LEG0 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G904090 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-46
Identity = 99/128 (77.34%), Postives = 111/128 (86.72%), Query Frame = 0

Query: 1   MSKSAQFFGFFLSALAIS----SVFAVRKIPEAIYSADWSAAVCWDAINPVEGCQDEIDT 60
           MSKS +FFGFFL  LA S    S FAVRKI EA+YS+D     CWDAIN V+GCQ+EIDT
Sbjct: 1   MSKSVRFFGFFLCVLATSSSFHSAFAVRKIAEAVYSSD-----CWDAINAVKGCQNEIDT 60

Query: 61  AMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISGAVNEYCDGMGITPPVLET 120
           AMKSNEIEVS+DCC+VILHG+PEKCAAVVFS+GGEFSP++SGAVNEYCDGMGITPPVLET
Sbjct: 61  AMKSNEIEVSYDCCKVILHGMPEKCAAVVFSSGGEFSPDVSGAVNEYCDGMGITPPVLET 120

Query: 121 ED-KVEES 124
           ED KVEE+
Sbjct: 121 EDTKVEEN 123

BLAST of CmUC09G172130 vs. ExPASy TrEMBL
Match: A0A6J1EX44 (uncharacterized protein LOC111437329 OS=Cucurbita moschata OX=3662 GN=LOC111437329 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.4e-44
Identity = 95/124 (76.61%), Postives = 102/124 (82.26%), Query Frame = 0

Query: 1   MSKSAQFFGFFLSALAIS------SVFAVRKIPEAIYSADWSAAVCWDAINPVEGCQDEI 60
           M KS +F GF L ALAIS      S FA+R IPEA+ SADWSAA CWDAI  VEGCQDEI
Sbjct: 1   MLKSVRFVGFLL-ALAISSSIQSESAFALRNIPEALNSADWSAATCWDAITAVEGCQDEI 60

Query: 61  DTAMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISGAVNEYCDGMGITPPVL 119
           D AMKSNEIEVS DCCR ILHGLP+KCAA VFS+GGEFS EISGAVNEYCDGMGITPPVL
Sbjct: 61  DMAMKSNEIEVSRDCCRAILHGLPDKCAAEVFSSGGEFSAEISGAVNEYCDGMGITPPVL 120

BLAST of CmUC09G172130 vs. ExPASy TrEMBL
Match: A0A5D2P8P3 (Prolamin_like domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G228100v1 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-06
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 0

Query: 39  VCWDAINPVEGCQDEIDTAMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISG 98
           VCW  IN   GC+ EI  ++   +I++S+ CC  +  G+  KC   +F N G FSPE   
Sbjct: 46  VCWAQINKANGCEHEIYASLVKKKIKLSYGCCEAV-QGMSSKCKNWMF-NHGRFSPEFGD 105

Query: 99  AVNEYCDGMGITPP 113
            +  YC  +G+T P
Sbjct: 106 QIKGYCATLGVTLP 117

BLAST of CmUC09G172130 vs. ExPASy TrEMBL
Match: A0A2P5VRJ4 (Prolamin_like domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA39249 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-06
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 0

Query: 39  VCWDAINPVEGCQDEIDTAMKSNEIEVSHDCCRVILHGLPEKCAAVVFSNGGEFSPEISG 98
           VCW  IN   GC+ EI  ++   +I++S+ CC  +  G+  KC   +F N G FSPE   
Sbjct: 35  VCWAQINKANGCEHEIYASLVKKKIKLSYGCCEAV-QGMSSKCKNWMF-NHGRFSPEFGD 94

Query: 99  AVNEYCDGMGITPP 113
            +  YC  +G+T P
Sbjct: 95  QIKGYCATLGVTLP 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0038539.11.3e-4779.69hypothetical protein E6C27_scaffold92G00660 [Cucumis melo var. makuwa] >TYK31136... [more]
XP_022931003.11.1e-4376.61uncharacterized protein LOC111437329 [Cucurbita moschata] >KAG6606231.1 hypothet... [more]
KAG6571831.12.3e-4176.27hypothetical protein SDJN03_28559, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8652857.15.4e-2285.25hypothetical protein Csa_023774, partial [Cucumis sativus][more]
PPR81469.15.4e-0637.84hypothetical protein GOBAR_AA39249 [Gossypium barbadense][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TB286.2e-4879.69Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A0A0LEG01.2e-4677.34Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G9040... [more]
A0A6J1EX445.4e-4476.61uncharacterized protein LOC111437329 OS=Cucurbita moschata OX=3662 GN=LOC1114373... [more]
A0A5D2P8P32.6e-0637.84Prolamin_like domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES33... [more]
A0A2P5VRJ42.6e-0637.84Prolamin_like domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008502Prolamin-like domainPFAMPF05617Prolamin_likecoord: 40..105
e-value: 2.7E-9
score: 37.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G172130.1CmUC09G172130.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0110165 cellular anatomical entity