CmUC09G168860 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G168860
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionglycine-rich protein 23-like
LocationCmU531Chr09: 8426493 .. 8426885 (-)
RNA-Seq ExpressionCmUC09G168860
SyntenyCmUC09G168860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAAATTGTTCATGGCTTTGCTCTTGGCTCTTGTGGCCACTCATGCCCTAGCTAGACCTACGCCAAATGATGCCACCTTCAATGACCAAAAGAACTTCCTCACCTACGGTGGCCTCGGTGGCTACTCCGGCATTGGCGGCAATGGCCTCCCGTTCGGTGGTGTGGGGGGTGTCGTTGGAGGAAATGGCCTCGGTGGCGGTCTCGGAGGTGGTATTGTTGGTGGCCTCGGTGGCGCTACGGGAATCGGTGGACTAGGAGGTGTTGGAGGCGGTTTGGGTGGGGGTGGCCTTGGTGGAACCGTTGGCGGAGCTACTGGTGGTCTTGGTGGTGGTCTCGGTGGTGGTCTTGGTGGCGGTGTTGGTGGAGCTTCTGGTGTTACTTATCCTTGA

mRNA sequence

ATGACCAAATTGTTCATGGCTTTGCTCTTGGCTCTTGTGGCCACTCATGCCCTAGCTAGACCTACGCCAAATGATGCCACCTTCAATGACCAAAAGAACTTCCTCACCTACGGTGGCCTCGGTGGCTACTCCGGCATTGGCGGCAATGGCCTCCCGTTCGGTGGTGTGGGGGGTGTCGTTGGAGGAAATGGCCTCGGTGGCGGTCTCGGAGGTGGTATTGTTGGTGGCCTCGGTGGCGCTACGGGAATCGGTGGACTAGGAGGTGTTGGAGGCGGTTTGGGTGGGGGTGGCCTTGGTGGAACCGTTGGCGGAGCTACTGGTGGTCTTGGTGGTGGTCTCGGTGGTGGTCTTGGTGGCGGTGTTGGTGGAGCTTCTGGTGTTACTTATCCTTGA

Coding sequence (CDS)

ATGACCAAATTGTTCATGGCTTTGCTCTTGGCTCTTGTGGCCACTCATGCCCTAGCTAGACCTACGCCAAATGATGCCACCTTCAATGACCAAAAGAACTTCCTCACCTACGGTGGCCTCGGTGGCTACTCCGGCATTGGCGGCAATGGCCTCCCGTTCGGTGGTGTGGGGGGTGTCGTTGGAGGAAATGGCCTCGGTGGCGGTCTCGGAGGTGGTATTGTTGGTGGCCTCGGTGGCGCTACGGGAATCGGTGGACTAGGAGGTGTTGGAGGCGGTTTGGGTGGGGGTGGCCTTGGTGGAACCGTTGGCGGAGCTACTGGTGGTCTTGGTGGTGGTCTCGGTGGTGGTCTTGGTGGCGGTGTTGGTGGAGCTTCTGGTGTTACTTATCCTTGA

Protein sequence

MTKLFMALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVVGGNGLGGGLGGGIVGGLGGATGIGGLGGVGGGLGGGGLGGTVGGATGGLGGGLGGGLGGGVGGASGVTYP
Homology
BLAST of CmUC09G168860 vs. NCBI nr
Match: XP_038898765.1 (acanthoscurrin-1-like [Benincasa hispida])

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-40
Identity = 118/133 (88.72%), Postives = 123/133 (92.48%), Query Frame = 0

Query: 1   MTKLFMALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVV 60
           M KLFMALLLALVAT  LARPTPN+ATFNDQKNFLTYGG+GGYSGIGGNGLPFGGVGG +
Sbjct: 1   MAKLFMALLLALVATTTLARPTPNEATFNDQKNFLTYGGVGGYSGIGGNGLPFGGVGGAI 60

Query: 61  GGNGLGGGLGGGIVGGLGGATGI---GGLGGVGGGLGGGGLGGTVGGATGGLGGGLGGGL 120
           GG GLGGGLGGG+ GGLGGATGI   GGLGGVGGGLGGGGLGGT+GG TGGLGGGLGGGL
Sbjct: 61  GGTGLGGGLGGGLGGGLGGATGIGGLGGLGGVGGGLGGGGLGGTIGGTTGGLGGGLGGGL 120

Query: 121 GGGVGGASGVTYP 131
           GGGVGGASGVTYP
Sbjct: 121 GGGVGGASGVTYP 133

BLAST of CmUC09G168860 vs. NCBI nr
Match: XP_011659762.1 (glycine-rich protein 5 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 2.2e-34
Identity = 110/132 (83.33%), Postives = 117/132 (88.64%), Query Frame = 0

Query: 1   MTKLFMALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVV 60
           M KLFMALLLALVATHALARPTP D TF+DQKNFLTYGG+GGYSGIG NGLPFGG+GG +
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 60

Query: 61  GGNGLGGGLGGGIVGGLGGATGI-GGLGGVGGGLGG-GGLGGTVGGATGGLGGGLGGGLG 120
           GG GLGGGLGGG+ GGLGG TGI GGLGG+GG  GG GG+GGT GG  GGLGGGLGGGLG
Sbjct: 61  GGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGGIGGTTGGLGGGLGGGLGGGLG 120

Query: 121 GGVGGASGVTYP 131
           GGVGGASGVTYP
Sbjct: 121 GGVGGASGVTYP 132

BLAST of CmUC09G168860 vs. NCBI nr
Match: KAE8646236.1 (hypothetical protein Csa_016187 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 2.2e-34
Identity = 110/132 (83.33%), Postives = 117/132 (88.64%), Query Frame = 0

Query: 1   MTKLFMALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVV 60
           M KLFMALLLALVATHALARPTP D TF+DQKNFLTYGG+GGYSGIG NGLPFGG+GG +
Sbjct: 38  MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 97

Query: 61  GGNGLGGGLGGGIVGGLGGATGI-GGLGGVGGGLGG-GGLGGTVGGATGGLGGGLGGGLG 120
           GG GLGGGLGGG+ GGLGG TGI GGLGG+GG  GG GG+GGT GG  GGLGGGLGGGLG
Sbjct: 98  GGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGGIGGTTGGLGGGLGGGLGGGLG 157

Query: 121 GGVGGASGVTYP 131
           GGVGGASGVTYP
Sbjct: 158 GGVGGASGVTYP 169

BLAST of CmUC09G168860 vs. NCBI nr
Match: KAA0050560.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 147.9 bits (372), Expect = 6.1e-32
Identity = 106/132 (80.30%), Postives = 111/132 (84.09%), Query Frame = 0

Query: 1   MTKLFMALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVV 60
           M KLFMALLLALVATHALARPTP D TF+DQKNFLTYGG+GGYSGIG NGLPFGGVGG +
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60

Query: 61  GGNGLGGGLGGGIVGGLGGATGIGGLGGVGGGLG--GGGLGGTVGGATGGLGGGLGGGLG 120
           GG GLGGGLGGG+ G  G   G+GGLGG GGGLG  GG  GG  GG  GGLGGGLGGGLG
Sbjct: 61  GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLG 120

Query: 121 GGVGGASGVTYP 131
           GGVGGASGVTYP
Sbjct: 121 GGVGGASGVTYP 132

BLAST of CmUC09G168860 vs. NCBI nr
Match: XP_008462124.1 (PREDICTED: acanthoscurrin-1-like [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 7.4e-30
Identity = 102/127 (80.31%), Postives = 107/127 (84.25%), Query Frame = 0

Query: 6   MALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVVGGNGL 65
           MALLLALVATHALARPTP D TF+DQKNFLTYGG+GGYSGIG NGLPFGGVGG +GG GL
Sbjct: 1   MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 60

Query: 66  GGGLGGGIVGGLGGATGIGGLGGVGGGLG--GGGLGGTVGGATGGLGGGLGGGLGGGVGG 125
           GGGLGGG+ G  G   G+GGLGG GGGLG  GG  GG  GG  GGLGGGLGGGLGGGVGG
Sbjct: 61  GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLGGGVGG 120

Query: 126 ASGVTYP 131
           ASGVTYP
Sbjct: 121 ASGVTYP 127

BLAST of CmUC09G168860 vs. ExPASy TrEMBL
Match: A0A0A0K9U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34
Identity = 110/132 (83.33%), Postives = 117/132 (88.64%), Query Frame = 0

Query: 1   MTKLFMALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVV 60
           M KLFMALLLALVATHALARPTP D TF+DQKNFLTYGG+GGYSGIG NGLPFGG+GG +
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 60

Query: 61  GGNGLGGGLGGGIVGGLGGATGI-GGLGGVGGGLGG-GGLGGTVGGATGGLGGGLGGGLG 120
           GG GLGGGLGGG+ GGLGG TGI GGLGG+GG  GG GG+GGT GG  GGLGGGLGGGLG
Sbjct: 61  GGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGGIGGTTGGLGGGLGGGLGGGLG 120

Query: 121 GGVGGASGVTYP 131
           GGVGGASGVTYP
Sbjct: 121 GGVGGASGVTYP 132

BLAST of CmUC09G168860 vs. ExPASy TrEMBL
Match: A0A5A7U5T7 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00150 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.9e-32
Identity = 106/132 (80.30%), Postives = 111/132 (84.09%), Query Frame = 0

Query: 1   MTKLFMALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVV 60
           M KLFMALLLALVATHALARPTP D TF+DQKNFLTYGG+GGYSGIG NGLPFGGVGG +
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60

Query: 61  GGNGLGGGLGGGIVGGLGGATGIGGLGGVGGGLG--GGGLGGTVGGATGGLGGGLGGGLG 120
           GG GLGGGLGGG+ G  G   G+GGLGG GGGLG  GG  GG  GG  GGLGGGLGGGLG
Sbjct: 61  GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLG 120

Query: 121 GGVGGASGVTYP 131
           GGVGGASGVTYP
Sbjct: 121 GGVGGASGVTYP 132

BLAST of CmUC09G168860 vs. ExPASy TrEMBL
Match: A0A1S3CGR1 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.6e-30
Identity = 102/127 (80.31%), Postives = 107/127 (84.25%), Query Frame = 0

Query: 6   MALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVVGGNGL 65
           MALLLALVATHALARPTP D TF+DQKNFLTYGG+GGYSGIG NGLPFGGVGG +GG GL
Sbjct: 1   MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 60

Query: 66  GGGLGGGIVGGLGGATGIGGLGGVGGGLG--GGGLGGTVGGATGGLGGGLGGGLGGGVGG 125
           GGGLGGG+ G  G   G+GGLGG GGGLG  GG  GG  GG  GGLGGGLGGGLGGGVGG
Sbjct: 61  GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGLGGGVGG 120

Query: 126 ASGVTYP 131
           ASGVTYP
Sbjct: 121 ASGVTYP 127

BLAST of CmUC09G168860 vs. ExPASy TrEMBL
Match: A0A6J1CPV7 (glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.2e-28
Identity = 101/134 (75.37%), Postives = 109/134 (81.34%), Query Frame = 0

Query: 1   MTKLFMALLLALVATHALAR--PTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGG 60
           M K+FM LLLALVATHA+AR  PTP DATF DQKNF TYGGLGGYSGIG NGLPFGGVGG
Sbjct: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60

Query: 61  VVGGNGLGGGLGGGIVGGLGGATGIGGLGGVGGGLGG--GGLGGTVGGATGGLGGGLGGG 120
            VGG GLGGGLGGG+ GG G   G+GGLGG GGGLGG  GG+GGT+GG  GG  GGLGGG
Sbjct: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGG--GGASGGLGGG 120

Query: 121 LGGGVGGASGVTYP 131
           LGGG+GG S + YP
Sbjct: 121 LGGGLGGGSALPYP 132

BLAST of CmUC09G168860 vs. ExPASy TrEMBL
Match: A0A6J1KVV3 (acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.7e-25
Identity = 102/138 (73.91%), Postives = 110/138 (79.71%), Query Frame = 0

Query: 1   MTKLFMALLLALVATHALARPTPNDATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGVV 60
           M KLFMA+LLAL+ATHALARPTP DATF DQKNFLTYGGLGGYSGIG NGLPFGG+GG V
Sbjct: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60

Query: 61  GGNGLGGGLGGGIVGGL----GGATGIGG--LGGVGGGLGGGGLGGTVGGAT--GGLGGG 120
           GG G  GG+GGGI GGL    GG  G+GG   GG+GGGLGGGGLGGT+GG    GGLGG 
Sbjct: 61  GGTG-PGGIGGGI-GGLGGFGGGGAGLGGGLGGGLGGGLGGGGLGGTMGGGNLGGGLGGT 120

Query: 121 LGGGLGGGVGGASGVTYP 131
           +GGGLGGGVGG  G   P
Sbjct: 121 VGGGLGGGVGGGGGSGLP 136

BLAST of CmUC09G168860 vs. TAIR 10
Match: AT4G29030.1 (Putative membrane lipoprotein )

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 66/129 (51.16%), Postives = 71/129 (55.04%), Query Frame = 0

Query: 1   MTKLFMALLLALVATHALARPTPN-DATFNDQKNFLTYGGLGGYSGIGGNGLPFGGVGGV 60
           M K F  + L      ALA    N     +DQKN+L YG  GGYSG+G NGLPFGGVGG 
Sbjct: 1   MAKWFFTIFLVFALASALACGARNVPVGLSDQKNYLGYG--GGYSGVGDNGLPFGGVGGG 60

Query: 61  VGGNGLGGGLGGGIVGGLGGATGIGGLGGVGGGLGGGGLGGTVGGATGGLGGGLGGGLGG 120
           V G               GG  G GG GG GGGL GGGLG   GGA  GLGGGLGGG G 
Sbjct: 61  VSGP--------------GGNLGYGGFGGAGGGL-GGGLG---GGAGSGLGGGLGGGSGI 109

Query: 121 GVGGASGVT 129
           G G + G T
Sbjct: 121 GAGTSGGST 109

BLAST of CmUC09G168860 vs. TAIR 10
Match: AT2G32690.2 (glycine-rich protein 23 )

HSP 1 Score: 42.0 bits (97), Expect = 4.4e-04
Identity = 58/89 (65.17%), Postives = 63/89 (70.79%), Query Frame = 0

Query: 38  GGLGGYSGIGGNGLPFGGVGGVVGGNGLGGGLGGGIVGGLGGATGIGGLGGVGGGLGGGG 97
           GGLGG  G+GG G   GG GG+ GG GLGGG G G  GGLGG +G+GG GG+GGGLGGG 
Sbjct: 73  GGLGGGGGLGGGG-GLGGGGGLGGGGGLGGGSGLGGGGGLGGGSGLGGGGGLGGGLGGGA 132

Query: 98  LGGTVGGATGGLGGGLGGGLGGGVGGASG 127
            GG  GGA GGLGGG G G GGG GG  G
Sbjct: 133 GGGYGGGAGGGLGGGGGIGGGGGFGGGGG 160

BLAST of CmUC09G168860 vs. TAIR 10
Match: AT2G32690.1 (glycine-rich protein 23 )

HSP 1 Score: 41.6 bits (96), Expect = 5.7e-04
Identity = 58/90 (64.44%), Postives = 65/90 (72.22%), Query Frame = 0

Query: 38  GGLGGYSGIGGNGLPFGGVGGVVGGNGLGGGLGGGIVGGLGGATGIGGLGGVGGGLGGGG 97
           GGLGG  G+GG G   GG GG+ GG GLGGG G G  GGLGG +G+GG GG+GGG GGGG
Sbjct: 73  GGLGGGGGLGGGG-GLGGGGGLGGGGGLGGGSGLGGGGGLGGGSGLGGGGGLGGG-GGGG 132

Query: 98  LGGTVGGATGGLGGGLGGGLGGGVGGASGV 128
           LGG  GG  GG GGG GGG GGG+GG  G+
Sbjct: 133 LGGG-GGLGGGAGGGYGGGAGGGLGGGGGI 159

BLAST of CmUC09G168860 vs. TAIR 10
Match: AT3G20470.1 (glycine-rich protein 5 )

HSP 1 Score: 41.6 bits (96), Expect = 5.7e-04
Identity = 64/100 (64.00%), Postives = 66/100 (66.00%), Query Frame = 0

Query: 30  DQKNFLTY--GGLGGYSGIGGNGLPFGGVGGVVGGNGLGGGLGGGIVGGLGGATGIGGLG 89
           DQK F  +  GGLGG  GIGG G   GG GG  GG GLGGG GGG  GGLGG  G G  G
Sbjct: 35  DQKTFFHHPGGGLGGGGGIGG-GSGLGGGGGFGGGGGLGGGAGGG--GGLGGGAGGGAGG 94

Query: 90  GVGGGLG-GGGLGGTVGGATGGLGGGLGGGLGGGVGGASG 127
           G GGG G GGGLGG  GGA GG GGG GGG GGG GG +G
Sbjct: 95  GFGGGAGSGGGLGGG-GGAGGGFGGGAGGGSGGGFGGGAG 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038898765.11.2e-4088.72acanthoscurrin-1-like [Benincasa hispida][more]
XP_011659762.12.2e-3483.33glycine-rich protein 5 [Cucumis sativus][more]
KAE8646236.12.2e-3483.33hypothetical protein Csa_016187 [Cucumis sativus][more]
KAA0050560.16.1e-3280.30acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-li... [more]
XP_008462124.17.4e-3080.31PREDICTED: acanthoscurrin-1-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K9U11.1e-3483.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1[more]
A0A5A7U5T72.9e-3280.30Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94... [more]
A0A1S3CGR13.6e-3080.31acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1[more]
A0A6J1CPV71.2e-2875.37glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4... [more]
A0A6J1KVV32.7e-2573.91acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29030.11.6e-0651.16Putative membrane lipoprotein [more]
AT2G32690.24.4e-0465.17glycine-rich protein 23 [more]
AT2G32690.15.7e-0464.44glycine-rich protein 23 [more]
AT3G20470.15.7e-0464.00glycine-rich protein 5 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34463:SF11GLYCINE-RICH PROTEINcoord: 4..124
NoneNo IPR availablePANTHERPTHR34463GLYCINE-RICH PROTEINcoord: 4..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G168860.1CmUC09G168860.1mRNA