CmUC09G168840 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC09G168840
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Acanthoscurrin-1-like
Location	CmU531Chr09: 8400523 .. 8400867 (+)
RNA-Seq Expression	CmUC09G168840
Synteny	CmUC09G168840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATTGTTCATGGCTTTGCTCTTGGCTCTTGTAGCTTCTCACGCCCTAGCTCGACCTACGCCAGACACCAGCTTCAATGACCAAAAGAACTTCCTGACCTACGGTGGCCTCGGTGGCTACTCTGGCATCGGCAGCAATGGCCTCCCGTTTGGTGGGGTGGGAGGTGCGGTTGGAGGAACTGGCCTCGGTGGTGGTCTCGGTGGTGGTCTCGGTGGCGCTACTGGAATTGGTGGACTAGGTGGACTGGGAGGCACTGGAGGTGGAGCTGCCGGTGGACTCGGAAGCGGAGTTGGTGGCGGAGTTGGTCCTGGCGGGGGTTCTGGTCTTACTAATCCTTGA

mRNA sequence

ATGGCCAAATTGTTCATGGCTTTGCTCTTGGCTCTTGTAGCTTCTCACGCCCTAGCTCGACCTACGCCAGACACCAGCTTCAATGACCAAAAGAACTTCCTGACCTACGGTGGCCTCGGTGGCTACTCTGGCATCGGCAGCAATGGCCTCCCGTTTGGTGGGGTGGGAGGTGCGGTTGGAGGAACTGGCCTCGGTGGTGGTCTCGGTGGTGGTCTCGGTGGCGCTACTGGAATTGGTGGACTAGGTGGACTGGGAGGCACTGGAGGTGGAGCTGCCGGTGGACTCGGAAGCGGAGTTGGTGGCGGAGTTGGTCCTGGCGGGGGTTCTGGTCTTACTAATCCTTGA

Coding sequence (CDS)

ATGGCCAAATTGTTCATGGCTTTGCTCTTGGCTCTTGTAGCTTCTCACGCCCTAGCTCGACCTACGCCAGACACCAGCTTCAATGACCAAAAGAACTTCCTGACCTACGGTGGCCTCGGTGGCTACTCTGGCATCGGCAGCAATGGCCTCCCGTTTGGTGGGGTGGGAGGTGCGGTTGGAGGAACTGGCCTCGGTGGTGGTCTCGGTGGTGGTCTCGGTGGCGCTACTGGAATTGGTGGACTAGGTGGACTGGGAGGCACTGGAGGTGGAGCTGCCGGTGGACTCGGAAGCGGAGTTGGTGGCGGAGTTGGTCCTGGCGGGGGTTCTGGTCTTACTAATCCTTGA

Protein sequence

MAKLFMALLLALVASHALARPTPDTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAVGGTGLGGGLGGGLGGATGIGGLGGLGGTGGGAAGGLGSGVGGGVGPGGGSGLTNP

Homology

[Close]

BLAST of CmUC09G168840 vs. NCBI nr
Match: XP_038899239.1 (glycine-rich protein 5-like [Benincasa hispida])

HSP 1 Score: 152.5 bits (384), Expect = 2.2e-33
Identity = 103/118 (87.29%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHALARPTPDTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAVG 60
           MAKLFMALLLALVA+HALARPTPDT+FNDQKNFLTYGGLG YSGIGSNGLPFGGVGGA+G
Sbjct: 1   MAKLFMALLLALVATHALARPTPDTTFNDQKNFLTYGGLGAYSGIGSNGLPFGGVGGAMG 60

Query: 61  GTGLGGGLGGGLGGATGIGGLGGLGGTGGGAAGGLGSGVGG----GVGPGGGSGLTNP 115
           GTGLGGGLGGGLGGAT   GLGGLGG+GGGAAGGLG G GG    GVG GGGSGLTNP
Sbjct: 61  GTGLGGGLGGGLGGAT---GLGGLGGSGGGAAGGLGGGAGGGAGAGVGVGGGSGLTNP 115

[Close]

BLAST of CmUC09G168840 vs. NCBI nr
Match: XP_008462002.1 (PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo])

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-29
Identity = 102/119 (85.71%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHALARP-TPDTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAV 60
           MAKLFMALLLAL+A+HALARP TP T+F+DQKNFLTYGGLGGYSGIGSNGLPFGGVGG V
Sbjct: 1   MAKLFMALLLALIATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGVGGVV 60

Query: 61  GGTGLGGGLGGGLGGATGIGGLGGLGGTGGGAAGGLGSGV----GGGVGPGGGSGLTNP 115
           GGTG  GGLGGGLGGATGIGGLGGL   GGGAAGGLGSGV    GGGVG GGGSGLTNP
Sbjct: 61  GGTG-PGGLGGGLGGATGIGGLGGL---GGGAAGGLGSGVGGGAGGGVGVGGGSGLTNP 115

[Close]

BLAST of CmUC09G168840 vs. NCBI nr
Match: XP_011659167.2 (glycine-rich protein 5 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 3.2e-29
Identity = 98/115 (85.22%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHALARP-TPDTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAV 60
           MAKLF+ALLLALVA+HALARP TP T+F+DQKNFLTYGGLGGYSGIGSNGLPFGG+GG +
Sbjct: 1   MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVI 60

Query: 61  GGTGLGGGLGGGLGGATGIGGLGGLGGTGGGAAGGLGSGVGGGVGPGGGSGLTNP 115
           GGTG  GGLGGGLGGATGI   GGLGG GGGAAGGLGSG GGGVG GGGSGLTNP
Sbjct: 61  GGTG-PGGLGGGLGGATGI---GGLGGPGGGAAGGLGSGAGGGVGIGGGSGLTNP 111

[Close]

BLAST of CmUC09G168840 vs. NCBI nr
Match: KAA0050569.1 (glycine-rich cell wall structural protein 1-like [Cucumis melo var. makuwa] >TYK18808.1 glycine-rich cell wall structural protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 138.3 bits (347), Expect = 4.2e-29
Identity = 101/119 (84.87%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHALARP-TPDTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAV 60
           MAKLF+ALLLAL+A+HALARP TP T+F+DQKNFLTYGGLGGYSGIGSNGLPFGGVGG V
Sbjct: 1   MAKLFIALLLALIATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGVGGVV 60

Query: 61  GGTGLGGGLGGGLGGATGIGGLGGLGGTGGGAAGGLGSGV----GGGVGPGGGSGLTNP 115
           GGTG  GGLGGGLGGATGIGGLGGL   GGGAAGGLGSGV    GGGVG GGGSGLTNP
Sbjct: 61  GGTG-PGGLGGGLGGATGIGGLGGL---GGGAAGGLGSGVGGGAGGGVGVGGGSGLTNP 115

[Close]

BLAST of CmUC09G168840 vs. NCBI nr
Match: KAA0050560.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 5.1e-27
Identity = 96/119 (80.67%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHALARPTP-DTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAV 60
           MAKLFMALLLALVA+HALARPTP D +F+DQKNFLTYGG+GGYSGIGSNGLPFGGVGGA+
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60

Query: 61  GGTGLGGGLGGGLGGATGI-GGLGGLGGTG------GGAAGGLGSGVGGGVGPGGGSGL 112
           GG GLGGGLGGGLGGATGI GGLGGLGGTG      GG  GGLG G+GGG+G G G GL
Sbjct: 61  GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGL 119

[Close]

BLAST of CmUC09G168840 vs. ExPASy TrEMBL
Match: A0A1S3CFV5 (glycine-rich cell wall structural protein 1-like OS=Cucumis melo OX=3656 GN=LOC103500476 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 7.0e-30
Identity = 102/119 (85.71%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHALARP-TPDTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAV 60
           MAKLFMALLLAL+A+HALARP TP T+F+DQKNFLTYGGLGGYSGIGSNGLPFGGVGG V
Sbjct: 1   MAKLFMALLLALIATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGVGGVV 60

Query: 61  GGTGLGGGLGGGLGGATGIGGLGGLGGTGGGAAGGLGSGV----GGGVGPGGGSGLTNP 115
           GGTG  GGLGGGLGGATGIGGLGGL   GGGAAGGLGSGV    GGGVG GGGSGLTNP
Sbjct: 61  GGTG-PGGLGGGLGGATGIGGLGGL---GGGAAGGLGSGVGGGAGGGVGVGGGSGLTNP 115

[Close]

BLAST of CmUC09G168840 vs. ExPASy TrEMBL
Match: A0A0A0K6P3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336480 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29
Identity = 98/115 (85.22%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHALARP-TPDTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAV 60
           MAKLF+ALLLALVA+HALARP TP T+F+DQKNFLTYGGLGGYSGIGSNGLPFGG+GG +
Sbjct: 1   MAKLFIALLLALVATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGMGGVI 60

Query: 61  GGTGLGGGLGGGLGGATGIGGLGGLGGTGGGAAGGLGSGVGGGVGPGGGSGLTNP 115
           GGTG  GGLGGGLGGATGI   GGLGG GGGAAGGLGSG GGGVG GGGSGLTNP
Sbjct: 61  GGTG-PGGLGGGLGGATGI---GGLGGPGGGAAGGLGSGAGGGVGIGGGSGLTNP 111

[Close]

BLAST of CmUC09G168840 vs. ExPASy TrEMBL
Match: A0A5D3D5H6 (Glycine-rich cell wall structural protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00260 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.0e-29
Identity = 101/119 (84.87%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHALARP-TPDTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAV 60
           MAKLF+ALLLAL+A+HALARP TP T+F+DQKNFLTYGGLGGYSGIGSNGLPFGGVGG V
Sbjct: 1   MAKLFIALLLALIATHALARPITPGTTFDDQKNFLTYGGLGGYSGIGSNGLPFGGVGGVV 60

Query: 61  GGTGLGGGLGGGLGGATGIGGLGGLGGTGGGAAGGLGSGV----GGGVGPGGGSGLTNP 115
           GGTG  GGLGGGLGGATGIGGLGGL   GGGAAGGLGSGV    GGGVG GGGSGLTNP
Sbjct: 61  GGTG-PGGLGGGLGGATGIGGLGGL---GGGAAGGLGSGVGGGAGGGVGVGGGSGLTNP 115

[Close]

BLAST of CmUC09G168840 vs. ExPASy TrEMBL
Match: A0A5A7U5T7 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00150 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.5e-27
Identity = 96/119 (80.67%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHALARPTP-DTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAV 60
           MAKLFMALLLALVA+HALARPTP D +F+DQKNFLTYGG+GGYSGIGSNGLPFGGVGGA+
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60

Query: 61  GGTGLGGGLGGGLGGATGI-GGLGGLGGTG------GGAAGGLGSGVGGGVGPGGGSGL 112
           GG GLGGGLGGGLGGATGI GGLGGLGGTG      GG  GGLG G+GGG+G G G GL
Sbjct: 61  GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGL 119

[Close]

BLAST of CmUC09G168840 vs. ExPASy TrEMBL
Match: A0A1S3CGR1 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.9e-25
Identity = 91/114 (79.82%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 6   MALLLALVASHALARPTP-DTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAVGGTGL 65
           MALLLALVA+HALARPTP D +F+DQKNFLTYGG+GGYSGIGSNGLPFGGVGGA+GG GL
Sbjct: 1   MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 60

Query: 66  GGGLGGGLGGATGI-GGLGGLGGTG------GGAAGGLGSGVGGGVGPGGGSGL 112
           GGGLGGGLGGATGI GGLGGLGGTG      GG  GGLG G+GGG+G G G GL
Sbjct: 61  GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTTGGLGGGLGGGLGGGLGGGL 114

[Close]

BLAST of CmUC09G168840 vs. TAIR 10
Match: AT4G29030.1 (Putative membrane lipoprotein )

HSP 1 Score: 52.4 bits (124), Expect = 2.8e-07
Identity = 64/113 (56.64%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 1   MAKLFMALLLALVASHAL---ARPTPDTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGG 60
           MAK F  + L    + AL   AR  P    +DQKN+L YG  GGYSG+G NGLPFGGVGG
Sbjct: 1   MAKWFFTIFLVFALASALACGARNVP-VGLSDQKNYLGYG--GGYSGVGDNGLPFGGVGG 60

Query: 61  AVGGTGLGGGLG-GGLGGATGIGGLGGLGGTGGGAAGGLGSGVGGGVGPGGGS 110
            V G   GG LG GG GGA   GGLG  GG GGGA  GLG G+GGG G G G+
Sbjct: 61  GVSGP--GGNLGYGGFGGAG--GGLG--GGLGGGAGSGLGGGLGGGSGIGAGT 104

[Close]

BLAST of CmUC09G168840 vs. TAIR 10
Match: AT4G29020.1 (glycine-rich protein )

HSP 1 Score: 41.6 bits (96), Expect = 5.0e-04
Identity = 58/117 (49.57%), Postives = 72/117 (61.54%), Query Frame = 0


Query: 9   LLALVASHAL--ARPTP----DTSFNDQKNFLTYGGLGGYSGIGSNGLPFGGVGGAVGGT 68
           L+AL+ S A+   RP P        +DQKNF+ + G+GG +GIG  G    G+GG  GG 
Sbjct: 10  LVALMVSQAVTATRPAPTKNVGAGLDDQKNFVAFAGVGGAAGIGGAGGVGAGLGGVAGGV 69

Query: 69  G------LGGGLGGGLGG-ATGIGGLGGLGGTGGGAAGGLGSGVGG-GVGPGGGSGL 112
           G        GG+GGG+GG   G+GGLGGLGG GGG+  GLG GVGG G  PG GSG+
Sbjct: 70  GGVAGVLPVGGVGGGIGGLGGGVGGLGGLGGLGGGS--GLGHGVGGIGGDPGIGSGI 124

The following BLAST results are available for this feature:

BLAST of CmUC09G168840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899239.1	2.2e-33	87.29	glycine-rich protein 5-like [Benincasa hispida]	[more]
XP_008462002.1	1.4e-29	85.71	PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]	[more]
XP_011659167.2	3.2e-29	85.22	glycine-rich protein 5 [Cucumis sativus]	[more]
KAA0050569.1	4.2e-29	84.87	glycine-rich cell wall structural protein 1-like [Cucumis melo var. makuwa] >TYK...	[more]
KAA0050560.1	5.1e-27	80.67	acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-li...	[more]

BLAST of CmUC09G168840 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC09G168840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFV5	7.0e-30	85.71	glycine-rich cell wall structural protein 1-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0K6P3	1.6e-29	85.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336480 PE=4 SV=1	[more]
A0A5D3D5H6	2.0e-29	84.87	Glycine-rich cell wall structural protein 1-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A5A7U5T7	2.5e-27	80.67	Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94...	[more]
A0A1S3CGR1	8.9e-25	79.82	acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1	[more]

BLAST of CmUC09G168840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29030.1	2.8e-07	56.64	Putative membrane lipoprotein	[more]
AT4G29020.1	5.0e-04	49.57	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34463:SF11	GLYCINE-RICH PROTEIN	coord: 1..110
None	No IPR available	PANTHER	PTHR34463	GLYCINE-RICH PROTEIN	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC09G168840.1	CmUC09G168840.1	mRNA