CmUC09G167920 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G167920
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr09: 7456171 .. 7456530 (-)
RNA-Seq ExpressionCmUC09G167920
SyntenyCmUC09G167920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAACTGCCGGTCCGCAGATTCAGCACCCATGTCCCAGAATGGGAAAGGAAAGCGATGGCGAAGGAAGAACAGAGGAGTAGGAAGAAATGTTGAAGGGGCCGACGGTGGGGGCGTTGCCGGAGAGGGTGGCGATGAAGGCCTGAGATCCGACCATGCCAATGGCGGTGGGGCTGGCCGGCGAGGCGAGAAAGGCGATGGAGAGCGAGGAATTTTTGGGATCGTAGGTATAGTGGAGAAAGGCGTTGAGCTGGGGAAGATCTTCGCAGTGGGTGAAAGATCTGTTGGGGAAGGATTGAGAAGAGCAAATGAGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGAAGAATGA

mRNA sequence

ATGATGAACTGCCGGTCCGCAGATTCAGCACCCATGTCCCAGAATGGGAAAGGAAAGCGATGGCGAAGGAAGAACAGAGGAGTAGGAAGAAATGTTGAAGGGGCCGACGGTGGGGGCGTTGCCGGAGAGGGTGGCGATGAAGGCCTGAGATCCGACCATGCCAATGGCGGTGGGGCTGGCCGGCGAGGCGAGAAAGGCGATGGAGAGCGAGGAATTTTTGGGATCGTAGGTATAGTGGAGAAAGGCGTTGAGCTGGGGAAGATCTTCGCAGTGGGTGAAAGATCTGTTGGGGAAGGATTGAGAAGAGCAAATGAGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGAAGAATGA

Coding sequence (CDS)

ATGATGAACTGCCGGTCCGCAGATTCAGCACCCATGTCCCAGAATGGGAAAGGAAAGCGATGGCGAAGGAAGAACAGAGGAGTAGGAAGAAATGTTGAAGGGGCCGACGGTGGGGGCGTTGCCGGAGAGGGTGGCGATGAAGGCCTGAGATCCGACCATGCCAATGGCGGTGGGGCTGGCCGGCGAGGCGAGAAAGGCGATGGAGAGCGAGGAATTTTTGGGATCGTAGGTATAGTGGAGAAAGGCGTTGAGCTGGGGAAGATCTTCGCAGTGGGTGAAAGATCTGTTGGGGAAGGATTGAGAAGAGCAAATGAGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGAAGAATGA

Protein sequence

MMNCRSADSAPMSQNGKGKRWRRKNRGVGRNVEGADGGGVAGEGGDEGLRSDHANGGGAGRRGEKGDGERGIFGIVGIVEKGVELGKIFAVGERSVGEGLRRANEGLGLGLGLGLGLEE
Homology
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BLAST of CmUC09G167920 vs. ExPASy TrEMBL
Match: A0A0A0K6W3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G368160 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14
Identity = 60/109 (55.05%), Postives = 70/109 (64.22%), Query Frame = 0 

Query: 16  GKGKRWRRKNRGVGRNVEGADGGGVAGEGGDEGLRSDHANG----------GGAGRRGEK 75
           GKG+R  R N  +  NVE  D  G   E G+EGL S HA G          GG G RGE+
Sbjct: 49  GKGERGGRTNGVIRSNVESTDSEGFGEESGEEGLGSSHAGGGGVDGPGDPTGGCGGRGEE 108

Query: 76  GDGERGIFGIVGIVEKGVELGKIFAVGERSVGEGLRRANEGLGLGLGLG 115
           GDGERGIFGIV  VE+GVE+G+I A+GE SV EGL RA+EG+G G G G
Sbjct: 109 GDGERGIFGIVRPVEEGVEIGEILAIGEGSVWEGLGRASEGMGDGKGRG 157

The following BLAST results are available for this feature:
BLAST of CmUC09G167920 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC09G167920 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC09G167920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6W31.1e-1455.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G368160 PE=4 SV=1[more]
BLAST of CmUC09G167920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G167920.1CmUC09G167920.1mRNA