CmUC09G165980 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G165980
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr09: 5196085 .. 5196420 (+)
RNA-Seq ExpressionCmUC09G165980
SyntenyCmUC09G165980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTAATAATCAAATCTTTAGTCTCTATGGCACTTATAGCTCTTCTTGTGTTCTCTAAATCCTTACCTAATTTTGCTAACGACGACGGTGTTTCCAATTTTAATGACGGAATGCTTCACAGGAACCTCCTTCAGACAACGGACCGTCATCAAATTGCAAAGTGTAAGAATGAAAATCAACACTCTTTTAAACAAGATATAAACAAAAAGCATCGACGATCTGCGAAGAAAGCCAATTGTCCAAATAAGTCGCTAGCAAATCGGAGTGGAACGATGTCGTTTGGCATCGGGTCTTTGCTGTTTCTTTCAATTGTTTATGGTTTCTTTTTCTGA

mRNA sequence

ATGGGTCTAATAATCAAATCTTTAGTCTCTATGGCACTTATAGCTCTTCTTGTGTTCTCTAAATCCTTACCTAATTTTGCTAACGACGACGGTGTTTCCAATTTTAATGACGGAATGCTTCACAGGAACCTCCTTCAGACAACGGACCGTCATCAAATTGCAAAGTGTAAGAATGAAAATCAACACTCTTTTAAACAAGATATAAACAAAAAGCATCGACGATCTGCGAAGAAAGCCAATTGTCCAAATAAGTCGCTAGCAAATCGGAGTGGAACGATGTCGTTTGGCATCGGGTCTTTGCTGTTTCTTTCAATTGTTTATGGTTTCTTTTTCTGA

Coding sequence (CDS)

ATGGGTCTAATAATCAAATCTTTAGTCTCTATGGCACTTATAGCTCTTCTTGTGTTCTCTAAATCCTTACCTAATTTTGCTAACGACGACGGTGTTTCCAATTTTAATGACGGAATGCTTCACAGGAACCTCCTTCAGACAACGGACCGTCATCAAATTGCAAAGTGTAAGAATGAAAATCAACACTCTTTTAAACAAGATATAAACAAAAAGCATCGACGATCTGCGAAGAAAGCCAATTGTCCAAATAAGTCGCTAGCAAATCGGAGTGGAACGATGTCGTTTGGCATCGGGTCTTTGCTGTTTCTTTCAATTGTTTATGGTTTCTTTTTCTGA

Protein sequence

MGLIIKSLVSMALIALLVFSKSLPNFANDDGVSNFNDGMLHRNLLQTTDRHQIAKCKNENQHSFKQDINKKHRRSAKKANCPNKSLANRSGTMSFGIGSLLFLSIVYGFFF
Homology
BLAST of CmUC09G165980 vs. NCBI nr
Match: KGN44885.1 (hypothetical protein Csa_016613 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-14
Identity = 65/115 (56.52%), Postives = 77/115 (66.96%), Query Frame = 0

Query: 1   MGLIIKSLVSMALIA-LLVFSKSLPNFAND-DGVSNFNDGMLHRNLLQTTDRHQIAKCKN 60
           MG IIK LVS+AL+A LL+ SK +  F  D + +SN N+ ML R  LQ TD HQIA   N
Sbjct: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIA---N 60

Query: 61  ENQHSFKQDINKK--HRRSAKKANCPN-KSLANRSGTMSFGIGSLLFLSIVYGFF 111
             Q+S K +  KK  H+   KKA+CPN KSLANR GTM FG+GSLL  SIVYG F
Sbjct: 61  GYQNSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLF 112

BLAST of CmUC09G165980 vs. NCBI nr
Match: KAE8646326.1 (hypothetical protein Csa_016649, partial [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 6.6e-11
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 0

Query: 1   MGLIIKSLVSMAL-IALLVFSKSLPNFAND-DGVSNFNDGMLHRNLLQTTDRHQIAKCKN 60
           MG IIK  V +A+ +ALL+ SK +   A D D +SN N+G+L RN++QTT+RH++    N
Sbjct: 1   MGAIIKLFVYVAIVVALLLLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVG---N 60

Query: 61  ENQHSFK-QDINKK-HRRSAKKANCPN-KSLANRSGTMSFGIGSL 101
             Q+S K +D N+  H++SAKKA+C N KSLANRSGTM FG+G L
Sbjct: 61  GYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVGPL 102

BLAST of CmUC09G165980 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10
Identity = 50/107 (46.73%), Postives = 72/107 (67.29%), Query Frame = 0

Query: 5   IKSLVSMALIALLVFSKSLPNFANDDGVS-NFNDGMLHRNLLQTTDRHQIAKCKNENQHS 64
           IKSL+S+AL+ALL+  + LP  A D GV+ +   G+   + LQT +RHQ+A+    NQ+S
Sbjct: 66  IKSLISIALLALLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGNQYS 125

Query: 65  FKQDINKKHRRSAKKANCPNKSLANRSGTMSFGIGSLLFLSIVYGFF 111
           F+Q I ++ RR+ ++A  P+ S AN S T SFG+GSLL L  V+G F
Sbjct: 126 FEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGVGSLLCLCTVFGLF 172

BLAST of CmUC09G165980 vs. NCBI nr
Match: XP_022954099.1 (uncharacterized protein LOC111456466 [Cucurbita moschata])

HSP 1 Score: 75.9 bits (185), Expect = 2.5e-10
Identity = 50/107 (46.73%), Postives = 72/107 (67.29%), Query Frame = 0

Query: 5   IKSLVSMALIALLVFSKSLPNFANDDGVS-NFNDGMLHRNLLQTTDRHQIAKCKNENQHS 64
           IKSL+S+AL+ALL+ S+ LP  A D GV+ +    +  R+ LQT +RHQ+A+     Q+S
Sbjct: 93  IKSLISIALLALLLLSEHLPISAADHGVAPSPLARVFRRDTLQTAERHQVAENGIGYQYS 152

Query: 65  FKQDINKKHRRSAKKANCPNKSLANRSGTMSFGIGSLLFLSIVYGFF 111
           F+Q I ++ RR+ ++A  P+ S AN S T SFG+GSLL L  V+G F
Sbjct: 153 FEQKIRRRARRAVRRAEGPSPSSANWSQTSSFGVGSLLCLCTVFGLF 199

BLAST of CmUC09G165980 vs. NCBI nr
Match: KAG6575858.1 (hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 74.7 bits (182), Expect = 5.6e-10
Identity = 49/100 (49.00%), Postives = 69/100 (69.00%), Query Frame = 0

Query: 5   IKSLVSMALIALLVFSKSLPNFANDDGVS-NFNDGMLHRNLLQTTDRHQIAKCKNENQHS 64
           IKSL+S+AL+ALL+ S+ LP  A D GV+ +   G+  R+ LQT +RHQ+A+     Q+S
Sbjct: 4   IKSLISIALLALLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGYQYS 63

Query: 65  FKQDINKKHRRSAKKANCPNKSLANRSGTMSFGIGSLLFL 104
           F+Q I ++ RR+ ++A  P+ S AN S T SFGIGSLL L
Sbjct: 64  FEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGIGSLLCL 103

BLAST of CmUC09G165980 vs. ExPASy TrEMBL
Match: A0A0A0K580 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394050 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14
Identity = 65/115 (56.52%), Postives = 77/115 (66.96%), Query Frame = 0

Query: 1   MGLIIKSLVSMALIA-LLVFSKSLPNFAND-DGVSNFNDGMLHRNLLQTTDRHQIAKCKN 60
           MG IIK LVS+AL+A LL+ SK +  F  D + +SN N+ ML R  LQ TD HQIA   N
Sbjct: 1   MGAIIKYLVSIALVATLLLLSKPVSTFVVDHEEISNSNNIMLLRKSLQVTDGHQIA---N 60

Query: 61  ENQHSFKQDINKK--HRRSAKKANCPN-KSLANRSGTMSFGIGSLLFLSIVYGFF 111
             Q+S K +  KK  H+   KKA+CPN KSLANR GTM FG+GSLL  SIVYG F
Sbjct: 61  GYQNSLKDEDTKKDEHKEPPKKAHCPNKKSLANRGGTMLFGVGSLLCFSIVYGLF 112

BLAST of CmUC09G165980 vs. ExPASy TrEMBL
Match: A0A0A0K5W7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394030 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.4e-11
Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 0

Query: 1   MGLIIKSLVSMAL-IALLVFSKSLPNFAND-DGVSNFNDGMLHRNLLQTTDRHQIAKCKN 60
           MG IIK  V +A+ +ALL+ SK +   A D D +SN N+G+L RN++QTT+RH++    N
Sbjct: 1   MGAIIKLFVYVAIVVALLLLSKPISTSAVDHDEISNSNNGILRRNVIQTTNRHEVG---N 60

Query: 61  ENQHSFK-QDINKK-HRRSAKKANCPN-KSLANRSGTMSFGIGSLL 102
             Q+S K +D N+  H++SAKKA+C N KSLANRSGTM FG+G L+
Sbjct: 61  GYQYSVKDEDTNQDGHKQSAKKAHCLNKKSLANRSGTMLFGVGPLV 103

BLAST of CmUC09G165980 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.4e-11
Identity = 50/107 (46.73%), Postives = 72/107 (67.29%), Query Frame = 0

Query: 5   IKSLVSMALIALLVFSKSLPNFANDDGVS-NFNDGMLHRNLLQTTDRHQIAKCKNENQHS 64
           IKSL+S+AL+ALL+  + LP  A D GV+ +   G+   + LQT +RHQ+A+    NQ+S
Sbjct: 66  IKSLISIALLALLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGNQYS 125

Query: 65  FKQDINKKHRRSAKKANCPNKSLANRSGTMSFGIGSLLFLSIVYGFF 111
           F+Q I ++ RR+ ++A  P+ S AN S T SFG+GSLL L  V+G F
Sbjct: 126 FEQKIRRRARRAVRRAEGPSPSSANWSRTSSFGVGSLLCLCTVFGLF 172

BLAST of CmUC09G165980 vs. ExPASy TrEMBL
Match: A0A6J1GRX2 (uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC111456466 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 50/107 (46.73%), Postives = 72/107 (67.29%), Query Frame = 0

Query: 5   IKSLVSMALIALLVFSKSLPNFANDDGVS-NFNDGMLHRNLLQTTDRHQIAKCKNENQHS 64
           IKSL+S+AL+ALL+ S+ LP  A D GV+ +    +  R+ LQT +RHQ+A+     Q+S
Sbjct: 93  IKSLISIALLALLLLSEHLPISAADHGVAPSPLARVFRRDTLQTAERHQVAENGIGYQYS 152

Query: 65  FKQDINKKHRRSAKKANCPNKSLANRSGTMSFGIGSLLFLSIVYGFF 111
           F+Q I ++ RR+ ++A  P+ S AN S T SFG+GSLL L  V+G F
Sbjct: 153 FEQKIRRRARRAVRRAEGPSPSSANWSQTSSFGVGSLLCLCTVFGLF 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN44885.12.2e-1456.52hypothetical protein Csa_016613 [Cucumis sativus][more]
KAE8646326.16.6e-1152.38hypothetical protein Csa_016649, partial [Cucumis sativus][more]
XP_022992473.11.1e-1046.73uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima][more]
XP_022954099.12.5e-1046.73uncharacterized protein LOC111456466 [Cucurbita moschata][more]
KAG6575858.15.6e-1049.00hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K5801.1e-1456.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394050 PE=4 SV=1[more]
A0A0A0K5W72.4e-1151.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394030 PE=4 SV=1[more]
A0A6J1JZB15.4e-1146.73uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GRX21.2e-1046.73uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC1114564... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G165980.1CmUC09G165980.1mRNA