CmUC09G165950 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G165950
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionProtein no-on-transient A-like
LocationCmU531Chr09: 5189033 .. 5189392 (+)
RNA-Seq ExpressionCmUC09G165950
SyntenyCmUC09G165950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAATCAAATCCCTAATTTTCATTCCTCTTCTTCTCCTTCTCTTCTTCTTCCAATCCCTACCCACTTCTGCCGCCGTTTGCGACGGCGCTTCCAATTCTCTCACCGGAATACTCCGCCGGAACATCCTTCAGACGGCGGCTCGTAGAATTGCAGACAACAATGTCGAACGCAAGATGAGTGTTCATATCAAAAGAGGTACAAGGGGCGGCCGCTCATCGTCGACGGGTTCATCGCCGATTCCGACAAGACCTGTATGGATTGGCACTGGCCGCCGTACATCGGCCGCGAATCGGAGCCGAGTCGCGTCCTTTGGCGTTGGATTTCTGCTCATTTTTTCGGGATTGTTCATGTGA

mRNA sequence

ATGGCTGCAATCAAATCCCTAATTTTCATTCCTCTTCTTCTCCTTCTCTTCTTCTTCCAATCCCTACCCACTTCTGCCGCCGTTTGCGACGGCGCTTCCAATTCTCTCACCGGAATACTCCGCCGGAACATCCTTCAGACGGCGGCTCGTAGAATTGCAGACAACAATGTCGAACGCAAGATGAGTGTTCATATCAAAAGAGGTACAAGGGGCGGCCGCTCATCGTCGACGGGTTCATCGCCGATTCCGACAAGACCTGTATGGATTGGCACTGGCCGCCGTACATCGGCCGCGAATCGGAGCCGAGTCGCGTCCTTTGGCGTTGGATTTCTGCTCATTTTTTCGGGATTGTTCATGTGA

Coding sequence (CDS)

ATGGCTGCAATCAAATCCCTAATTTTCATTCCTCTTCTTCTCCTTCTCTTCTTCTTCCAATCCCTACCCACTTCTGCCGCCGTTTGCGACGGCGCTTCCAATTCTCTCACCGGAATACTCCGCCGGAACATCCTTCAGACGGCGGCTCGTAGAATTGCAGACAACAATGTCGAACGCAAGATGAGTGTTCATATCAAAAGAGGTACAAGGGGCGGCCGCTCATCGTCGACGGGTTCATCGCCGATTCCGACAAGACCTGTATGGATTGGCACTGGCCGCCGTACATCGGCCGCGAATCGGAGCCGAGTCGCGTCCTTTGGCGTTGGATTTCTGCTCATTTTTTCGGGATTGTTCATGTGA

Protein sequence

MAAIKSLIFIPLLLLLFFFQSLPTSAAVCDGASNSLTGILRRNILQTAARRIADNNVERKMSVHIKRGTRGGRSSSTGSSPIPTRPVWIGTGRRTSAANRSRVASFGVGFLLIFSGLFM
Homology
BLAST of CmUC09G165950 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22
Identity = 77/122 (63.11%), Postives = 88/122 (72.13%), Query Frame = 0

Query: 1   MAAIKSLIFIPLLLLLFFFQSLPTSAAVCDGASNSLTGILRRNILQTAARRIADNNVERK 60
           MAAIKSL+FI LL LLFF +SL TSAA C GASNS+TG+LRRN+LQTA   IAD+  E K
Sbjct: 1   MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADS--EGK 60

Query: 61  MSVHIKRGTRGGRSSSTGSSPIPTRPVWIG---TGRRTSAANRSRVASFGVGFLLIFSGL 120
           M+VHIKRG  GGR           RPV  G   TG R SAA+RS+VASFG+GFLL FS L
Sbjct: 61  MNVHIKRG-GGGR----------IRPVAAGTGFTGNRKSAASRSQVASFGLGFLLFFSRL 109

BLAST of CmUC09G165950 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 2.4e-19
Identity = 72/119 (60.50%), Postives = 82/119 (68.91%), Query Frame = 0

Query: 1   MAAIKSLIFIPLLLLLFFFQSLPTSAAVCDGASNSLTGILRRNILQTAARRIADNNVERK 60
           MAAIKSLI I LL LLFF +SL TSAA C GASNS+T +LRRNILQTA   IAD+  E K
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADS--EGK 60

Query: 61  MSVHIKRGTRGGRSSSTGSSPIPTRPVWIGTGRRTSAANRSRVASFGVGFLLIFSGLFM 120
           M+V IK+G   GR    G+          GTG R+SAANRSRV SFG+GFLL F GL +
Sbjct: 61  MNVRIKKGGL-GRFRPIGAG--------TGTGTRSSAANRSRVDSFGLGFLLFFFGLVL 108

BLAST of CmUC09G165950 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100.9 bits (250), Expect = 7.8e-18
Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 0

Query: 1   MAAIKSLIFIPLLLLLFFFQSLPTSAAVCDGASNSLTGILRRNILQTAARRIADNNV--- 60
           MAA+KSL+ + LL LL F +SL  SA    G SNSLTG+LRRN+LQTAA +IADN+V   
Sbjct: 1   MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESS 60

Query: 61  -ERKMSVHIKRGTRGGRSSSTGSSPIPTRPVWIGTGRRTSAANRSRVASFGVGFLLIFSG 120
            ERKM+VHIKR  R                  + TG R+SAANRSR+AS GVG +L+  G
Sbjct: 61  PERKMNVHIKRRMRP-----------------VATGTRSSAANRSRIASIGVGSVLVVLG 106

BLAST of CmUC09G165950 vs. NCBI nr
Match: XP_008451666.1 (PREDICTED: protein no-on-transient A-like [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 3.1e-14
Identity = 72/142 (50.70%), Postives = 81/142 (57.04%), Query Frame = 0

Query: 1   MAAIKSLIFIPLLLLLFFFQSL-PTSAAVCDGASNSLTGILRRNILQTAARRIADNNV-- 60
           MAAIK+ IFI LL LLFF++ L P    V    SNS+TG+L R ILQTAA + A +NV  
Sbjct: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61  --ERKM-SVHIKRGT---------------RGGRSSSTG--SSPIPTRPVWIGTGRRTSA 120
             ERKM +VH+K GT               RGGR    G   S   T     GTG   SA
Sbjct: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120

BLAST of CmUC09G165950 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-13
Identity = 64/122 (52.46%), Postives = 75/122 (61.48%), Query Frame = 0

Query: 1   MAAIKSLIFIPLLLLLFFFQSLPTSAAVCDGASNSLTGILRRNILQTAARRIADNNVERK 60
           MAAIK+L+ I L+ LL FF+SLPTSAAV  GAS SL GILRRNI+QT A        E+K
Sbjct: 1   MAAIKALLSIALIALLLFFESLPTSAAVHRGASTSLAGILRRNIVQTTADH--HQVAEKK 60

Query: 61  MSVHIKRGTRGGRSSSTGSSPIPTRPVWIGTGRRTSAANRSRVASFGVGFLL---IFSGL 120
            +VHIKR  R              RPV IG   +TSAANRSR A  GVG +L   +  GL
Sbjct: 61  FNVHIKRRMR-------------MRPVLIGR-PKTSAANRSREAFCGVGSMLCIFVLLGL 106

BLAST of CmUC09G165950 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.7e-23
Identity = 77/122 (63.11%), Postives = 88/122 (72.13%), Query Frame = 0

Query: 1   MAAIKSLIFIPLLLLLFFFQSLPTSAAVCDGASNSLTGILRRNILQTAARRIADNNVERK 60
           MAAIKSL+FI LL LLFF +SL TSAA C GASNS+TG+LRRN+LQTA   IAD+  E K
Sbjct: 1   MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADS--EGK 60

Query: 61  MSVHIKRGTRGGRSSSTGSSPIPTRPVWIG---TGRRTSAANRSRVASFGVGFLLIFSGL 120
           M+VHIKRG  GGR           RPV  G   TG R SAA+RS+VASFG+GFLL FS L
Sbjct: 61  MNVHIKRG-GGGR----------IRPVAAGTGFTGNRKSAASRSQVASFGLGFLLFFSRL 109

BLAST of CmUC09G165950 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 72/119 (60.50%), Postives = 82/119 (68.91%), Query Frame = 0

Query: 1   MAAIKSLIFIPLLLLLFFFQSLPTSAAVCDGASNSLTGILRRNILQTAARRIADNNVERK 60
           MAAIKSLI I LL LLFF +SL TSAA C GASNS+T +LRRNILQTA   IAD+  E K
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADS--EGK 60

Query: 61  MSVHIKRGTRGGRSSSTGSSPIPTRPVWIGTGRRTSAANRSRVASFGVGFLLIFSGLFM 120
           M+V IK+G   GR    G+          GTG R+SAANRSRV SFG+GFLL F GL +
Sbjct: 61  MNVRIKKGGL-GRFRPIGAG--------TGTGTRSSAANRSRVDSFGLGFLLFFFGLVL 108

BLAST of CmUC09G165950 vs. ExPASy TrEMBL
Match: A0A1S3BRF6 (protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14
Identity = 72/142 (50.70%), Postives = 81/142 (57.04%), Query Frame = 0

Query: 1   MAAIKSLIFIPLLLLLFFFQSL-PTSAAVCDGASNSLTGILRRNILQTAARRIADNNV-- 60
           MAAIK+ IFI LL LLFF++ L P    V    SNS+TG+L R ILQTAA + A +NV  
Sbjct: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61  --ERKM-SVHIKRGT---------------RGGRSSSTG--SSPIPTRPVWIGTGRRTSA 120
             ERKM +VH+K GT               RGGR    G   S   T     GTG   SA
Sbjct: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120

BLAST of CmUC09G165950 vs. ExPASy TrEMBL
Match: A0A5A7VN87 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00030 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-05
Identity = 42/80 (52.50%), Postives = 53/80 (66.25%), Query Frame = 0

Query: 1  MAAIKSLIFIPLLLLLFFFQSL-PTSAAVCDGASNSLTGILRRNILQTAARRIADNNV-- 60
          MAAIK+ IFI LL LLFF++ L P    V    SNS+TG+L R ILQTAA + A +NV  
Sbjct: 1  MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61 --ERKM-SVHIKRGTRGGRS 75
            ERKM +VH+K   R G++
Sbjct: 61 SSERKMNNVHMKIDRRSGQT 80

BLAST of CmUC09G165950 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.8e-05
Identity = 48/119 (40.34%), Postives = 61/119 (51.26%), Query Frame = 0

Query: 1   MAAIKSLIFIPLLLLLFFFQSLPTSAAVCDGASNSLTGILRRNILQTAAR-RIADNNVER 60
           MA IKSLI I LL LL  F+ LP SAA    A + L G+ R + LQTA R ++A+N +  
Sbjct: 63  MAPIKSLISIALLALLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGN 122

Query: 61  KMSVHIKRGTRGGRSSSTGSSPIPTRPVWIGTGRRTSAANRSRVASFGVGFLLIFSGLF 119
           + S   K   R  R+      P P            S+AN SR +SFGVG LL    +F
Sbjct: 123 QYSFEQKIRRRARRAVRRAEGPSP------------SSANWSRTSSFGVGSLLCLCTVF 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0068047.11.8e-2263.11protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no... [more]
KGN44886.12.4e-1960.50hypothetical protein Csa_015765 [Cucumis sativus][more]
KAG6575859.17.8e-1852.85hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008451666.13.1e-1450.70PREDICTED: protein no-on-transient A-like [Cucumis melo][more]
KAG6593163.14.4e-1352.46hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VLE58.7e-2363.11Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0KAQ71.2e-1960.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1[more]
A0A1S3BRF61.5e-1450.70protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1[more]
A0A5A7VN871.3e-0552.50Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1JZB12.8e-0540.34uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G165950.1CmUC09G165950.1mRNA