CmUC09G165060 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC09G165060
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Type B response regulator
Location	CmU531Chr09: 4484663 .. 4487155 (+)
RNA-Seq Expression	CmUC09G165060
Synteny	CmUC09G165060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTTGACTGTAAGCTTATTCTCAACATTATTATAAAGTTTCTCAAATTTGATTTTTGTTTTTCGATTAAAAAAAAAAAAAAACATTCATTAATCATTGATTAACCTTCAAATTACTTAAACATTCTGATCATAAAATTACATTACAATAACCCACATTCTATAGTTAATGAGTGCATTTGAATGTTTGGCAATATGTGTTTAGCAAATGAAGATAACTGATTATAAGTAGATTTTGATTCAGATAGACACTTGGTGATCGTCGATAACTCAGCCGCCCCGACCGCCGGAGATCTGGGTGGTCCTTCCGGCGCACATGGAGGAGAAATCAATTATTTTAATCTTGAAGCCATACAGAAAAGAAAAGAGATAGGAGCTAAAAAGGCACGTTTCATTTGGACGGATGAACTCCACCAAATATTTATTGATGCTGTTAATAGTTTAACTCTAGAAAGTAAGGGCTCTTAAATTTATATGAAATATAGTTGTCACACACAAACAAAAATAAAATAAAAAAATAAAAAAAAAAACCCACTTACAAAAAAGTGTTCAATTTTGTTTATTTGAAAGTAAATTCATGTTCTTTGTATTTTAATTCATTCAAAAGCCCTAATTTCATAAGTGTTTGCTAATTTTCTTTTTATTTTTTTGGATCTTGGGGGTGTTTTGTTTGACTTATGTAGAAGCTGTTCCGAGGAAAATTTTAGAATACATGAGAATTTATGGTGTTCAAAATATCACAAGAGCAATTGTTGCTAGTCACCTTCAGGTATATTATACCAGTACATATATATTTTTGGGGCAATGACATTTTTAGTCTTAAGTTTGATCCTAAGGTTTCAAAAGGTATTCTTTTAGTATTTGAATTTTTAAAAATAGATTTAAAAAAATATCATGAGTAATTCATTATTATTGTTTAAATAGAAAATATAATTTTAAATTAAAAATATTAATTAAAAAAAGTGTCTTTTCTCTCTCCTCCCTCCACTCATTATGATATAGTGAGGTTCATTACTTCAACTAGTACATTCCCGTCTTCCTCAAATAAATCTCTTAGTTATTGAGAGAGTTATCATCCATATAAGAATTTAAGACATTGATATATGTGTATTTTTTGTCTTTGTATCCATTTAAGGTATAGGGAATACATATACTTTCGATTGTTCAATCATTTGATAACCAATCATTCTTTGATAAATGATCACTATGTCGAGTTAGACTTAATAGAATTTTATCAATCTTTTTTCATGTCTGTAAGGTGGAGACCTAAACCGAGAATTCTCTTTCTTTATCATCCATACATCCCTTATCAGTATATGGATAGTTGTCTCTCAAGCACAAATTTAGGTTCGGCCTCAATGAAAAAATAAAACGGAGCACCTAAACAACATATCTTTGTGAACCAAAAACCCTAGCAATTTGAAAACTAGGAACTCCTCACTTATATGAACTCCTAATTAAAAAAAAATTATAGCACTCAAATTCAATTTGATGTCAATCCAAAAGGACAGAGTAGATAGGATTATCTTTTGATCGAAGACTAAAAGATAACGACAACTAATTCAAACACTCCTCAAGTAAGTTGATTAGACCTACCTAAATGTTCATCAGTGATGATGCTTTGTCATCAAACATGGAAATTTGAGTCAATTCAAAAACTCGAAAACTAATTGGTCCTTTCAAACCCTTTAAACCTATTAACTTAGCCCAAAAATTCTACCCCTTACTAAAAAATACATGGTAAAATTAATAAACAAGGGCCCAAAACACAAACACCTAAAAAATAAAGTTTGCTTGCAAAAATTACTATAATGATTTTTAACAAAGCTTAATCAATTTCATCATGTCATGTAAAAATTTAGTATAATAATAATAAATTACTCATGGATCTATTGAACATATTCTTAAAAAACTCACGATTAAAATGGTGCATTTTGAAATTTTAAGGATCAAGCTTGAAAATGAGGGACTAAAGAGGTCATTCTCTCTATATTTTTGTCTCTTTTTTGGAACAATTTTGAAGTTAATATCATTTTTAATCTTATGCAGAAATATAGGTTGAATCTTAAAAGACATGTCGAGGTCGATAAAGCATCAAAGTTACCCTCCCAATCAATCTCTCTCAATGTGACCAAAAGAAGAAATCAAGAAGAAGACATAAGAAAACAAGTGTTGCAAGAAAAGTTGATTTTTGAAATGAAACATCATCAGTGGCCTCTAATTGAATCTCTATTAGGACCGAGCATAAAGCTACACATGATGTCTTTTCCTCATCTTTATAACAAAAATGAACATCTTCGTCTTCCAAATCTACCTAATCAATTCTCTAGATATGTTGATGGGAATACTAATAACAATCTTATTGCCCCTCTCATCAACAATAGATTGAGCAATGATGTTTCAAATGATTGTCTCTATCTCAAGATTTTGAGAGAATATGAAGAAGCTTACAAAGATTTCTATGGTCATAGTATGCATATCCAACCCTAG

mRNA sequence

ATGTCTGTTGACTATAGACACTTGGTGATCGTCGATAACTCAGCCGCCCCGACCGCCGGAGATCTGGGTGGTCCTTCCGGCGCACATGGAGGAGAAATCAATTATTTTAATCTTGAAGCCATACAGAAAAGAAAAGAGATAGGAGCTAAAAAGGCACGTTTCATTTGGACGGATGAACTCCACCAAATATTTATTGATGCTGTTAATAGTTTAACTCTAGAAAAAGCTGTTCCGAGGAAAATTTTAGAATACATGAGAATTTATGGTGTTCAAAATATCACAAGAGCAATTGTTGCTAGTCACCTTCAGAAATATAGGTTGAATCTTAAAAGACATGTCGAGGTCGATAAAGCATCAAAGTTACCCTCCCAATCAATCTCTCTCAATGTGACCAAAAGAAGAAATCAAGAAGAAGACATAAGAAAACAAGTGTTGCAAGAAAAGTTGATTTTTGAAATGAAACATCATCAGTGGCCTCTAATTGAATCTCTATTAGGACCGAGCATAAAGCTACACATGATGTCTTTTCCTCATCTTTATAACAAAAATGAACATCTTCGTCTTCCAAATCTACCTAATCAATTCTCTAGATATGTTGATGGGAATACTAATAACAATCTTATTGCCCCTCTCATCAACAATAGATTGAGCAATGATGTTTCAAATGATTGTCTCTATCTCAAGATTTTGAGAGAATATGAAGAAGCTTACAAAGATTTCTATGGTCATAGTATGCATATCCAACCCTAG

Coding sequence (CDS)

ATGTCTGTTGACTATAGACACTTGGTGATCGTCGATAACTCAGCCGCCCCGACCGCCGGAGATCTGGGTGGTCCTTCCGGCGCACATGGAGGAGAAATCAATTATTTTAATCTTGAAGCCATACAGAAAAGAAAAGAGATAGGAGCTAAAAAGGCACGTTTCATTTGGACGGATGAACTCCACCAAATATTTATTGATGCTGTTAATAGTTTAACTCTAGAAAAAGCTGTTCCGAGGAAAATTTTAGAATACATGAGAATTTATGGTGTTCAAAATATCACAAGAGCAATTGTTGCTAGTCACCTTCAGAAATATAGGTTGAATCTTAAAAGACATGTCGAGGTCGATAAAGCATCAAAGTTACCCTCCCAATCAATCTCTCTCAATGTGACCAAAAGAAGAAATCAAGAAGAAGACATAAGAAAACAAGTGTTGCAAGAAAAGTTGATTTTTGAAATGAAACATCATCAGTGGCCTCTAATTGAATCTCTATTAGGACCGAGCATAAAGCTACACATGATGTCTTTTCCTCATCTTTATAACAAAAATGAACATCTTCGTCTTCCAAATCTACCTAATCAATTCTCTAGATATGTTGATGGGAATACTAATAACAATCTTATTGCCCCTCTCATCAACAATAGATTGAGCAATGATGTTTCAAATGATTGTCTCTATCTCAAGATTTTGAGAGAATATGAAGAAGCTTACAAAGATTTCTATGGTCATAGTATGCATATCCAACCCTAG

Protein sequence

MSVDYRHLVIVDNSAAPTAGDLGGPSGAHGGEINYFNLEAIQKRKEIGAKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLNLKRHVEVDKASKLPSQSISLNVTKRRNQEEDIRKQVLQEKLIFEMKHHQWPLIESLLGPSIKLHMMSFPHLYNKNEHLRLPNLPNQFSRYVDGNTNNNLIAPLINNRLSNDVSNDCLYLKILREYEEAYKDFYGHSMHIQP

Homology

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BLAST of CmUC09G165060 vs. NCBI nr
Match: KAA0046668.1 (type B response regulator [Cucumis melo var. makuwa] >TYK18203.1 type B response regulator [Cucumis melo var. makuwa])

HSP 1 Score: 228.8 bits (582), Expect = 5.2e-56
Identity = 157/321 (48.91%), Postives = 195/321 (60.75%), Query Frame = 0


Query: 1   MSVDYRHLVIVDNSA-APTAG------------DLGGPSGAHGGEINYFNL-EAIQKRKE 60
           M VDYR+LV  +NSA  PTA             +LGGPS A GGEINYF++ EA+Q+R  
Sbjct: 19  MPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINYFDVDEALQERTG 78

Query: 61  IGAKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYR 120
           IG ++ RFIWT E HQIF++AVN+LTL++AVPRKILEYMR  GVQNITRAIVASHLQKYR
Sbjct: 79  IGPRRTRFIWTPECHQIFVEAVNTLTLQRAVPRKILEYMRNCGVQNITRAIVASHLQKYR 138

Query: 121 LNLKR-HVEVDKASKLPSQSISLNVTKRRNQEEDIRK----------------------- 180
           L LK+ HVEVDKAS++P ++IS N T  RNQEE++R                        
Sbjct: 139 LGLKKGHVEVDKASQVPFRTISFNATNGRNQEENMRNQDENMRYQDQGNMRYQEGNMRYQ 198

Query: 181 -------QVLQEKLI-FEMKHHQWPLI-ESLLGPSI-KLHMMSFPHLYNKNEHLRLPNL- 240
                  Q LQE L+ +EM + +WPL  ESL  P + + +M S P+LY KNE   L NL 
Sbjct: 199 EVNMTNHQGLQENLLNYEMTNQRWPLFEESLPRPGLTQPNMFSPPYLY-KNEPTHLQNLP 258

Query: 241 ------------------PNQFSRYVDGNTNNNLIAPLINNRLSNDV-SND-CLYLKILR 250
                             PNQF+RY DGN NNN++A LIN+ LSN V  ND   Y K+LR
Sbjct: 259 NQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLASLINDGLSNHVPDNDRSHYHKVLR 318

[Close]

BLAST of CmUC09G165060 vs. NCBI nr
Match: KAG6593219.1 (Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-19
Identity = 63/130 (48.46%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 23  GGPSGAHGGEINYFNLEA-----IQKRKEIGAKKARFIWTDELHQIFIDAVNSLTLEKAV 82
           GG S   GGE+   ++E+     I++R+E   +K RF+WTDELH+IF+ A N  TL++AV
Sbjct: 46  GGSSATCGGEVETTHVESERSKKIERREEF--RKRRFVWTDELHRIFVHAFN--TLDQAV 105

Query: 83  PRKILEYMRIYGVQNITRAIVASHLQKYRLNLKRH-VEVDKA------SKLPSQSISLNV 141
           PRKILE+MR +GV+NITRAI+ASHLQKYRL+LKR+ ++VDK+      S  PS  I    
Sbjct: 106 PRKILEFMRNFGVRNITRAIIASHLQKYRLHLKRYDLKVDKSFKDDDVSSCPSSDILQEA 165

[Close]

BLAST of CmUC09G165060 vs. NCBI nr
Match: XP_038896346.1 (two-component response regulator ARR14-like [Benincasa hispida])

HSP 1 Score: 86.7 bits (213), Expect = 3.2e-13
Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 0


Query: 49  AKKARFIWTDELHQIFIDAVNSLTLE--KAVPRKILEYMRIYGVQNITRAIVASHLQKYR 108
           +KK RFIWTDE HQIF+DA+N +T +  K VP KI++YM+  GV +I+R  +ASHLQKYR
Sbjct: 256 SKKRRFIWTDEYHQIFLDAINDITTKVGKIVPAKIMKYMKTKGVSHISRENIASHLQKYR 315

Query: 109 LNLKRHVE-VDKASKLPSQSIS-------------LNVTKRRNQEEDIRKQVLQEKLIFE 168
             +K+    +DK S  P+  ++               +TK +N  +  ++    E ++F+
Sbjct: 316 SYMKKCKNGIDKPSDFPNNDVTKESNLVKSCPSDDQTLTKTQNLTKQEQETSFNEAILFD 375

[Close]

BLAST of CmUC09G165060 vs. NCBI nr
Match: KAG7180408.1 (hypothetical protein NADE_007677 [Chlorella desiccata (nom. nud.)] >KAG7185246.1 hypothetical protein NADE_002829 [Chlorella desiccata (nom. nud.)] >KAG7667531.1 hypothetical protein KSW81_001227 [Chlorella desiccata (nom. nud.)])

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-12
Identity = 52/125 (41.60%), Postives = 73/125 (58.40%), Query Frame = 0


Query: 6   RHLVIVDNSAAPTAGDLGGPSGAHGGEINYFNLEAIQKRKE--IGAKKARFIWTDELHQI 65
           R  V +  +   +A D  G S  HG +      EA++   E   G+KKAR +W+ E+HQ 
Sbjct: 158 RRSVHISRTGDDSAADYDGDSRTHGTK-RKTETEALRAEHESVSGSKKARVVWSVEMHQQ 217

Query: 66  FIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLNLKR--HVEVDKASKL 125
           F+ AVN L ++KAVP++IL+ M + G   +TR  VASHLQKYRL LKR   V+  K  +L
Sbjct: 218 FVTAVNMLGIDKAVPKRILDLMNVEG---LTRENVASHLQKYRLYLKRVEGVQNGKGGRL 277

Query: 126 PSQSI 127
           P   +
Sbjct: 278 PKPPV 278

[Close]

BLAST of CmUC09G165060 vs. NCBI nr
Match: KAE8009422.1 (hypothetical protein FH972_005859 [Carpinus fangiana])

HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11
Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 47  IGAKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYR 106
           +GAKK+R IWT +LH  F+  VN L L++AVP+KILE M+  GV N+TR  VASHLQKYR
Sbjct: 215 VGAKKSRMIWTPDLHHKFVAIVNELGLKRAVPKKILERMQAMGVPNLTREKVASHLQKYR 274

Query: 107 LNLKR 112
           L L++
Sbjct: 275 LFLQK 279

[Close]

BLAST of CmUC09G165060 vs. ExPASy Swiss-Prot
Match: A2X1N2 (Two-component response regulator ORR24 OS=Oryza sativa subsp. indica OX=39946 GN=RR24 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 50  KKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLNL 109
           KK R +W+ ELH+ F+ AVN L +EKAVP+KIL+ M    V+NITR  VASHLQKYRL L
Sbjct: 212 KKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLM---NVENITRENVASHLQKYRLYL 270

Query: 110 KR 112
           KR
Sbjct: 272 KR 270

[Close]

BLAST of CmUC09G165060 vs. ExPASy Swiss-Prot
Match: Q6H805 (Two-component response regulator ORR24 OS=Oryza sativa subsp. japonica OX=39947 GN=RR24 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 50  KKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLNL 109
           KK R +W+ ELH+ F+ AVN L +EKAVP+KIL+ M    V+NITR  VASHLQKYRL L
Sbjct: 212 KKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLM---NVENITRENVASHLQKYRLYL 270

Query: 110 KR 112
           KR
Sbjct: 272 KR 270

[Close]

BLAST of CmUC09G165060 vs. ExPASy Swiss-Prot
Match: A2XE31 (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.1e-12
Identity = 37/63 (58.73%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 49  AKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLN 108
           +KK R +W+ ELHQ F++AVN L ++KAVP+KILE M + G   +TR  VASHLQK+RL 
Sbjct: 200 SKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPG---LTRENVASHLQKFRLY 259

Query: 109 LKR 112
           LKR
Sbjct: 260 LKR 259

[Close]

BLAST of CmUC09G165060 vs. ExPASy Swiss-Prot
Match: Q8H7S7 (Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica OX=39947 GN=RR21 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.1e-12
Identity = 37/63 (58.73%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 49  AKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLN 108
           +KK R +W+ ELHQ F++AVN L ++KAVP+KILE M + G   +TR  VASHLQK+RL 
Sbjct: 200 SKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPG---LTRENVASHLQKFRLY 259

Query: 109 LKR 112
           LKR
Sbjct: 260 LKR 259

[Close]

BLAST of CmUC09G165060 vs. ExPASy Swiss-Prot
Match: Q9FGT7 (Two-component response regulator ARR18 OS=Arabidopsis thaliana OX=3702 GN=ARR18 PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-11
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 50  KKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLNL 109
           KK R +W+ ELHQ F+ AV  L L+KAVP+KIL+ M I G   +TR  VASHLQKYRL L
Sbjct: 193 KKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEG---LTRENVASHLQKYRLYL 252

Query: 110 KRHVEVDKASKLP 123
           K+  E  + +  P
Sbjct: 253 KKIDEGQQQNMTP 262

[Close]

BLAST of CmUC09G165060 vs. ExPASy TrEMBL
Match: A0A5D3D1X5 (Type B response regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001420 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.5e-56
Identity = 157/321 (48.91%), Postives = 195/321 (60.75%), Query Frame = 0


Query: 1   MSVDYRHLVIVDNSA-APTAG------------DLGGPSGAHGGEINYFNL-EAIQKRKE 60
           M VDYR+LV  +NSA  PTA             +LGGPS A GGEINYF++ EA+Q+R  
Sbjct: 19  MPVDYRNLVSEENSAPVPTASISTGELGGSITRELGGPSTADGGEINYFDVDEALQERTG 78

Query: 61  IGAKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYR 120
           IG ++ RFIWT E HQIF++AVN+LTL++AVPRKILEYMR  GVQNITRAIVASHLQKYR
Sbjct: 79  IGPRRTRFIWTPECHQIFVEAVNTLTLQRAVPRKILEYMRNCGVQNITRAIVASHLQKYR 138

Query: 121 LNLKR-HVEVDKASKLPSQSISLNVTKRRNQEEDIRK----------------------- 180
           L LK+ HVEVDKAS++P ++IS N T  RNQEE++R                        
Sbjct: 139 LGLKKGHVEVDKASQVPFRTISFNATNGRNQEENMRNQDENMRYQDQGNMRYQEGNMRYQ 198

Query: 181 -------QVLQEKLI-FEMKHHQWPLI-ESLLGPSI-KLHMMSFPHLYNKNEHLRLPNL- 240
                  Q LQE L+ +EM + +WPL  ESL  P + + +M S P+LY KNE   L NL 
Sbjct: 199 EVNMTNHQGLQENLLNYEMTNQRWPLFEESLPRPGLTQPNMFSPPYLY-KNEPTHLQNLP 258

Query: 241 ------------------PNQFSRYVDGNTNNNLIAPLINNRLSNDV-SND-CLYLKILR 250
                             PNQF+RY DGN NNN++A LIN+ LSN V  ND   Y K+LR
Sbjct: 259 NQFPGYVDANNNNNVIASPNQFARYADGNNNNNVLASLINDGLSNHVPDNDRSHYHKVLR 318

[Close]

BLAST of CmUC09G165060 vs. ExPASy TrEMBL
Match: A0A0A0KB26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405920 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.4e-20
Identity = 62/118 (52.54%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 1   MSVDYRHLVIVDNSAAPTA------------GDLGGPSGAHGG-EINYFNLEAIQKRKEI 60
           M V+ R L   +NSA PTA            G+LGG S A  G + N F+ +   +R+EI
Sbjct: 21  MPVNNRSLGREENSAVPTASINIGEFGESSTGELGGRSVAESGDQNNSFDADEPLQRQEI 80

Query: 61  GAKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKY 106
             ++ RFIWTDE H+IF++AV+ LTL++AVPRKILEYM   GVQNITRAIVASHLQ +
Sbjct: 81  FPRRTRFIWTDEYHRIFVEAVDRLTLQRAVPRKILEYMINCGVQNITRAIVASHLQGF 138

[Close]

BLAST of CmUC09G165060 vs. ExPASy TrEMBL
Match: A0A0A0KB26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405920 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-05
Identity = 35/77 (45.45%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 134 RNQEEDIRKQVLQE-KLIFEMKHHQ-WPLIESLLGPSIKLHMMSFPHLYNKNEHLRLPNL 193
           R QE ++R Q  QE + + +M   Q WPL ESL  P +    +  P  + KNE   L NL
Sbjct: 498 RYQEGNMRNQASQEDRFVHQMTRQQRWPLFESLSRPGLTQDNIILPQFFQKNEPNHLQNL 557

Query: 194 PNQFSRYVDGNTNNNLI 209
           PNQF  YVDGN N N+I
Sbjct: 558 PNQFPGYVDGNNNYNVI 574

HSP 2 Score: 80.9 bits (198), Expect = 8.4e-12
Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 47  IGAKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYR 106
           +GAKK+R IWT +LH  F+  VN L L++AVP+KILE M+  GV N+TR  VASHLQKYR
Sbjct: 215 VGAKKSRMIWTPDLHHKFVAIVNELGLKRAVPKKILERMQAMGVPNLTREKVASHLQKYR 274

Query: 107 LNLKR 112
           L L++
Sbjct: 275 LFLQK 279

[Close]

BLAST of CmUC09G165060 vs. ExPASy TrEMBL
Match: A0A444ZUP2 (Response regulatory domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g062455 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11
Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 49  AKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLN 108
           +KK RF+WT+E HQ+F+DAV  L ++KAVPRKILE+M    + ++ R  VASHLQKYR++
Sbjct: 196 SKKPRFVWTEERHQMFVDAVLQLGIDKAVPRKILEWM---DIPDLRRENVASHLQKYRMH 255

Query: 109 LKRHVEVDKASKLPSQSISLNVTKRRNQE 138
           LK+ +E  K +    +   +NV +  N++
Sbjct: 256 LKKKIEETKQTNSDGK---INVNRETNKQ 278

[Close]

BLAST of CmUC09G165060 vs. ExPASy TrEMBL
Match: A0A7S3BXY7 (Hypothetical protein OS=Prasinoderma singulare OX=676789 GN=PSIN1315_LOCUS11204 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 43  KRKEIGA--KKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVAS 102
           KRK+ GA  KK R +W+ ELHQ F++AVN+L ++KAVP++IL+ M + G   +TR  VAS
Sbjct: 120 KRKKDGAPSKKQRVVWSVELHQKFVNAVNTLGIDKAVPKRILDLMCVSG---LTRENVAS 179

Query: 103 HLQKYRLNLKR----HVEVDKASKLPSQSISLNVTKRRNQEEDIRKQVLQE 148
           HLQKYRL LKR      E  +  +LP +   +   +   QEE +++Q  Q+
Sbjct: 180 HLQKYRLYLKRIAVQQGEEGREQQLPEEEAGVGSGRAPEQEEPMQQQPAQQ 227

[Close]

BLAST of CmUC09G165060 vs. TAIR 10
Match: AT5G58080.1 (response regulator 18 )

HSP 1 Score: 72.0 bits (175), Expect = 7.5e-13
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 50  KKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLNL 109
           KK R +W+ ELHQ F+ AV  L L+KAVP+KIL+ M I G   +TR  VASHLQKYRL L
Sbjct: 176 KKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEG---LTRENVASHLQKYRLYL 235

Query: 110 KRHVEVDKASKLP 123
           K+  E  + +  P
Sbjct: 236 KKIDEGQQQNMTP 245

[Close]

BLAST of CmUC09G165060 vs. TAIR 10
Match: AT3G16857.1 (response regulator 1 )

HSP 1 Score: 71.6 bits (174), Expect = 9.8e-13
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 50  KKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLNL 109
           KK R +W+ ELHQ F+ AVN L +EKAVP+KILE M + G   +TR  VASHLQKYR+ L
Sbjct: 236 KKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPG---LTRENVASHLQKYRIYL 294

Query: 110 KR 112
           +R
Sbjct: 296 RR 294

[Close]

BLAST of CmUC09G165060 vs. TAIR 10
Match: AT3G16857.2 (response regulator 1 )

HSP 1 Score: 71.6 bits (174), Expect = 9.8e-13
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 50  KKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLNL 109
           KK R +W+ ELHQ F+ AVN L +EKAVP+KILE M + G   +TR  VASHLQKYR+ L
Sbjct: 236 KKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPG---LTRENVASHLQKYRIYL 294

Query: 110 KR 112
           +R
Sbjct: 296 RR 294

[Close]

BLAST of CmUC09G165060 vs. TAIR 10
Match: AT2G01760.1 (response regulator 14 )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 49  AKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHLQKYRLN 108
           +KK+R +W+ ELHQ F++AVN L ++KAVP++ILE M + G   ++R  VASHLQK+RL 
Sbjct: 198 SKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPG---LSRENVASHLQKFRLY 257

Query: 109 LKRHVEVDKASKLPSQSISLNVTKR 134
           LKR       S   SQS     TKR
Sbjct: 258 LKR------LSGEASQSNDSESTKR 273

[Close]

BLAST of CmUC09G165060 vs. TAIR 10
Match: AT4G16110.1 (response regulator 2 )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 43  KRKEIGAKKARFIWTDELHQIFIDAVNSLTLEKAVPRKILEYMRIYGVQNITRAIVASHL 102
           K      KK R +W+ ELHQ F+ AVN L ++KAVP+KILE M + G   +TR  VASHL
Sbjct: 208 KEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPG---LTRENVASHL 267

Query: 103 QKYRLNLKR 112
           QKYR+ L+R
Sbjct: 268 QKYRIYLRR 273

The following BLAST results are available for this feature:

BLAST of CmUC09G165060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046668.1	5.2e-56	48.91	type B response regulator [Cucumis melo var. makuwa] >TYK18203.1 type B response...	[more]
KAG6593219.1	1.0e-19	48.46	Two-component response regulator ORR24, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_038896346.1	3.2e-13	37.23	two-component response regulator ARR14-like [Benincasa hispida]	[more]
KAG7180408.1	2.1e-12	41.60	hypothetical protein NADE_007677 [Chlorella desiccata (nom. nud.)] >KAG7185246.1...	[more]
KAE8009422.1	1.7e-11	60.00	hypothetical protein FH972_005859 [Carpinus fangiana]	[more]

BLAST of CmUC09G165060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2X1N2	2.1e-12	62.90	Two-component response regulator ORR24 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q6H805	2.1e-12	62.90	Two-component response regulator ORR24 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A2XE31	8.1e-12	58.73	Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q8H7S7	8.1e-12	58.73	Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9FGT7	1.1e-11	53.42	Two-component response regulator ARR18 OS=Arabidopsis thaliana OX=3702 GN=ARR18 ...	[more]

BLAST of CmUC09G165060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1X5	2.5e-56	48.91	Type B response regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KB26	6.4e-20	52.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405920 PE=3 SV=1	[more]
A0A0A0KB26	2.6e-05	45.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405920 PE=3 SV=1	[more]
A0A444ZUP2	1.1e-11	46.07	Response regulatory domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy...	[more]
A0A7S3BXY7	1.1e-11	44.14	Hypothetical protein OS=Prasinoderma singulare OX=676789 GN=PSIN1315_LOCUS11204 ...	[more]

BLAST of CmUC09G165060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58080.1	7.5e-13	53.42	response regulator 18	[more]
AT3G16857.1	9.8e-13	59.68	response regulator 1	[more]
AT3G16857.2	9.8e-13	59.68	response regulator 1	[more]
AT2G01760.1	1.7e-12	49.41	response regulator 14	[more]
AT4G16110.1	1.7e-12	53.62	response regulator 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 48..112 e-value: 4.3E-24 score: 86.3
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 51..108 e-value: 1.7E-18 score: 64.6
IPR044841	Transcription factor LUX/BOA-like	PANTHER	PTHR31442	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 44..135
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 49..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC09G165060.1	CmUC09G165060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity