CmUC09G164250 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC09G164250
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Photosystem II stability/assembly factor
Location	CmU531Chr09: 3768196 .. 3773035 (-)
RNA-Seq Expression	CmUC09G164250
Synteny	CmUC09G164250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTCTGCAACAACAACTCCTCAAACCTTCATGGACCTCCTCTCTCTTCGCTTCCTCCTCTCCTCGCCATTCCCTCTCTCAACCCCAACTTCAGTCTCGAACTCTTACTTCCACCACGCCTAAAGCTTCTCTTCAGAATTCTTCCATCAATCGCCGCCAGTTTGTAGCTGAGACTGCAGCCGCGGTTTCTCTGTCGCTTTCTCCGTTGATTTCTCCCGTACAACCAGCGAAGTCTGAGGAGTCTTTGTCGGAGTGGGAGAGACTTTACCTCCCTATAGATCCTGGTGTTGTCCTTCTCGACATTGCTTTTGTGCCTGATGATTTGGACCATGGTTAGTTTCGATTGCTTTGGTTCCTTTTGCTGCTTGGTCGTTGAGGATGAAATGCACGAGAGTTTCATTTATTTTTGTTTTTCTTCTATGAATTTTGCGATCGCGAGTTGGGAATTCACTGATTACGGTAATTAATTGTTGGAAATATCTGGAGTTTGGGAGAATTTGTTCATGGAACAGTTATTAGCAGGCTTAATTGTTCGTCATTATTGTCGTCTCTTAGGGCTTGAAGCCTATTCTAGTTAAGTTAAGCTGGTCTTGTGAAGTCTATCAATAGTCTTTTTGGGGTTTTGTTGCCTAATCGAATTCGTGGAAAGAAATATCTGATTATGATTTCTTCAAATGTTTTTATCTACCTTGTTGGTGCTTACGGATTTTGTCAAGGTTCCTGACTATTGTAATTTGTAGTTTCTCGTTGCCACAGTTATGGCTTTTGAGTTCGTTTCACCAATATAATTCCAGGAAATTATTTGACACTTTCAGCCCACTGCAGGCTTCCTTTTGGGGACTAGGCAAACCATTTTAGAGACAAAAGATGGTGGAAGAACATGGGCTCCACGTTCAATACCCTCGGCTGAAGAAGAAGACTTTAACTACCGATTTAATTCAATTAGCTTCAAAGGAAAGGAGGGATGGATTGTTGGCAAGCCTGCAATTCTGTTGTACACTTCGGATGCTGGAGAAAGTTGGCAAAGGATACCTCTTAGTGCTCAGCTTCCTGGAGATATGGTAAACTAATATTTCATATCATTATAAGGAATTGTCATATGTGATCATGCTTGAATTAGTTTTTTCTATTTTAAGATTGAATGGTACGCTTTAGCCTTTTTGTTATCAATTGTAGTTATTATTTATAATGCTCATTTGATGTGGCTAAACAAGGTAAGATTGTAGGAGCATGAACCTATTAACCACAGAAACTCAAGTGCACTCATTTACAAATTAAGATGAAAATGTTGATTATGTACAGCTATAAATTAATCTGTTTTTTTTCTGTCAAAAAGTGCTTATATTTGACTCTAAAGTGGGTGATTCTAATATAAATCTTCAGGTCTACATTAAAGCAACTGGAGAAAAAAGTGCAGAGATGGTTACTGATGAAGGTGCAATTTATGTTACATCTAACAAGGGATATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTTAATAGGTGAGCTTCAGCAGGGGAGAATTTTCCATTCTAAGAGTGTTTACAAAAAATACTCGTTTAGAATTTAACCTTGAAATCATGTGGAATAATTAATAAGCTGATAACTGATAAGATTTTACTGGCAGCTTGTGGAAGGAAATCATGGGCCATAGTTCAATAGTTTAGCTCATTAAAGGAAGAAATTCGATCCCTATTATGAGATGCTAATGTGGTTTTTTTACCTTTTCCAGAACAGTTTCTAGTGGTATAAGTGGTGCAAGCTATTATACTGGAACCTTTAACACAGTAAATCGCTCTCCTGATGGCCGTTATGTAGCTGTTTCAAGTCGTGGTAACTTCTACCTCACCTGGGAGCCTGGGCAGGTTTAACTTCTTTATTTCTTTCTCTTTATCTATCTTCTAAGTATATTGCTTTGAACTGGTTGTGGAAGCAGTTTACTACTGCTAAATAAGATTGTTGAGTGGTGAGCTTCTGTCGGGCTAATCGCCACATTTGTAAGTCATTAAAACTGGCTTTATTTGCAATTTCAGCCATTCTGGCAGCCACATAATAGAGCTATTGCAAGGAGGATTCAGAACATGGGGTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTCTTAGTAAAGGGACAGGGGTAAGTAAAGTTGGTCCTTTGCATTTCTAGTCAAGCCACGCTAATGGAAAAAAATGAAAAATGGTTTAGAGTTGCAATGTGGTGTGATTTTAACCTTTAACAAAAATCATTTCTCCCTTCTCCTACCAGTTACTCAAGCATTGAATATTCTATGTATAAGCTTTCATCTTTAGGCTTGTGGCTGCATAATAATTCAATATCGGAATAAACGCATAACTTTTCAGATATGTTTTCATTTGAAACTTTTGTTGGTTTTTTTTCTAAAAAGAAAATTATTGTTATTATTATTATATTCCCCTTAATCAAAATGATGAAAACATTGCAAGTGCACAAGCCAAATTTTCACCAATTCATGATTTTCTTGAGAACGGAGTGAGATGTAAATTCTACATTGTCATTCTATTCCCAGAATTGCAGCTAGGAGCCTAGACCTCTCAGCCAACTCCTGTTTAGTATTAACTGCTTGTTGAATTCAATATGTTTAATATAACAGATAACTGAGGAGTTTGAAGAAGTTCCAGTTCAAAGTCGAGGTTTTGGCATATTAGATGTCGGTTATCGGTCAAAGGTAATCTTTTAAAGTCATTAAATGCCTATACTTCAATGCATCCCAATTCATTCTTGAAGACTGCTGATATTGTAATTGAGATTGAAAATTAAATTTGTTTGTTGTAAATTGTTAAATTTGACCTTCTTGGACTCTAATTTCGATCTCGTTGATTTGTGTGGGAGATTACATAAGGGAAGGGCTAGACAGAATCCTCAATAGGATTATCTAGTTTTTTTTATTAGACATTCTATATGTTGAACTGATAGATATAGTATTAAACGTGTGCTGTGCAGAACTAATTAGTTTTTAGCATTCTAGCACAATAATGAATGTGAATGAGAGAGAGACATAGCACAAATGATTGGATGAAAGTAAAAATGGTAGTTTGTCTTACTATTAGCATTTCATGTCATGTATGCAAAATTTCAAGCGCATCTCGGGTCATTTCCTACCTGTTCAACATTATTTGTGTATTATTGATTCTAAAACCATCATTATCTATGAACACAAGTGGCTAGATGAGAGAAACTGAGAGAGAATGAGATAGAATTATCTGGATAGTTGCGTGAATGACTAGATTAAGAAAATACTTATGATTCATCTTGATTAGCACTTGTTCTCATCCATTCCATTTAACAGAACTGTTTCTGATTTCCTCCTGTGCAACATCAGATGGCTACATGTTGCTTTTCTAAATTCCAAGTTTCTAACTAGCTGAGGGTCTCGGACTGTAGCTGGTAAAGCTAGTTTGTATTTGAGCAGGTTATTTTTATGGCCAGGAGAGCAAGTTCCAATGTGAGCCAAAAAAAAATAAAAAATAAAAAATAAAAAAATAATAATAAAAAAAAAAAAAGGTAGTTTTTTAAAAGGGTTAGAGTATGCATGAAGTAGGTGGAAAAGCTCTGTGTGGTTGTGACAATGAGAGGGAAAAGAAAAAAAATAATAATAAAGACATTTTAACTAGCCCGATACATATTTATGAAATGAGGTGTGGGTATGTTGATCTGCATCTTCTGTGGAGTTGTTAGGTTTCTCGTTTGATCACAGATTTTCTTGCAATTCTTAACACGAGGAGTGATGGTACTATCGTAGAACTTTTACAATCTTGTGTTCATAATAAGCAATTGCATTGTCCAAAATACCTTGAGCTCGCGTCATAAGTCATGTATATATTGTGCAAAGTAGTGTATATCTCATTATCTCTTGGCAATGCATATATAATCTGTGTGCTGATATTTGAAGATCCGATCCATATCCTTTTGTATCATGAGCACCAGACAAAGAGGAAGTATCATCCCTTTGCCCAAATTGATCATTGATTTGATGGATTTTTTTTATTAATATTATTGTTTTAATTTCTGGTCTGAGTTGTACAGGAAGAGGCTTGGGCAGCTGGGGGAAGTGGAGTACTTCTGAAAACTACAAATGGTGGCAGGACATGGACCCGTGATAAAGCAGCTGACAATATTGCAGCCAACCTATACTCTGTAAAGTGAGTATCACCATTCTGTAAACATTAGTTTGTCTTACAATTTTTTGAAATCTGAAATTACCTCCTACTCAAGTTCTTACTTTAGGACCATCCCTTTACATGAACTCTCTTTCTTTGGTTGTCCTGTTTCCGTCAGATGAATAAAGAGTAACAGGACGAATCAAAGTTCTATACCTTGCTTCATCTTAAGGTTCTTTTTAGGTTGAGTTTGGGATCACTTTTGGGAGGTAAAAAAAGTTTTTAACATGTTAGAAACACTTTTCAAAATTTTTACAGGGTTTAGTTACATAATTGAAAATAATGTTAATTCTTTTTTTAAAAAAAATGCTAAGAATCACTTGGAAGTGATATTAAAGTATCCAGTATTTATTTTAAAAGTCATCTCAAACTCACTCTCTAACATAAAAATAATATCAAGTTTTTTTTGCCAAGAAAAGCCTAACTCTTCCAATCGCTGTAATTTTGCAAAAGAAATTTTGGGCATTGAGTTTGAGCATGAGTTCTTTACTTTCAATTCGCCTTCACATGGTCTCTTATAATCTACATACATCTCTGCAGGTTTATAAACGATAAGAAAGGTTTTGTGCTCGGAAATGATGGGGTGTTACTTCAATATCTTGGTTGA

mRNA sequence

ATGGCGACTCTGCAACAACAACTCCTCAAACCTTCATGGACCTCCTCTCTCTTCGCTTCCTCCTCTCCTCGCCATTCCCTCTCTCAACCCCAACTTCAGTCTCGAACTCTTACTTCCACCACGCCTAAAGCTTCTCTTCAGAATTCTTCCATCAATCGCCGCCAGTTTGTAGCTGAGACTGCAGCCGCGGTTTCTCTGTCGCTTTCTCCGTTGATTTCTCCCGTACAACCAGCGAAGTCTGAGGAGTCTTTGTCGGAGTGGGAGAGACTTTACCTCCCTATAGATCCTGGTGTTGTCCTTCTCGACATTGCTTTTGTGCCTGATGATTTGGACCATGGCTTCCTTTTGGGGACTAGGCAAACCATTTTAGAGACAAAAGATGGTGGAAGAACATGGGCTCCACGTTCAATACCCTCGGCTGAAGAAGAAGACTTTAACTACCGATTTAATTCAATTAGCTTCAAAGGAAAGGAGGGATGGATTGTTGGCAAGCCTGCAATTCTGTTGTACACTTCGGATGCTGGAGAAAGTTGGCAAAGGATACCTCTTAGTGCTCAGCTTCCTGGAGATATGGTCTACATTAAAGCAACTGGAGAAAAAAGTGCAGAGATGGTTACTGATGAAGGTGCAATTTATGTTACATCTAACAAGGGATATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTTAATAGAACAGTTTCTAGTGGTATAAGTGGTGCAAGCTATTATACTGGAACCTTTAACACAGTAAATCGCTCTCCTGATGGCCGTTATGTAGCTGTTTCAAGTCGTGGTAACTTCTACCTCACCTGGGAGCCTGGGCAGCCATTCTGGCAGCCACATAATAGAGCTATTGCAAGGAGGATTCAGAACATGGGGTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTCTTAGTAAAGGGACAGGGATAACTGAGGAGTTTGAAGAAGTTCCAGTTCAAAGTCGAGGTTTTGGCATATTAGATGTCGGTTATCGGTCAAAGGAAGAGGCTTGGGCAGCTGGGGGAAGTGGAGTACTTCTGAAAACTACAAATGGTGGCAGGACATGGACCCGTGATAAAGCAGCTGACAATATTGCAGCCAACCTATACTCTGTAAAGTTTATAAACGATAAGAAAGGTTTTGTGCTCGGAAATGATGGGGTGTTACTTCAATATCTTGGTTGA

Coding sequence (CDS)

ATGGCGACTCTGCAACAACAACTCCTCAAACCTTCATGGACCTCCTCTCTCTTCGCTTCCTCCTCTCCTCGCCATTCCCTCTCTCAACCCCAACTTCAGTCTCGAACTCTTACTTCCACCACGCCTAAAGCTTCTCTTCAGAATTCTTCCATCAATCGCCGCCAGTTTGTAGCTGAGACTGCAGCCGCGGTTTCTCTGTCGCTTTCTCCGTTGATTTCTCCCGTACAACCAGCGAAGTCTGAGGAGTCTTTGTCGGAGTGGGAGAGACTTTACCTCCCTATAGATCCTGGTGTTGTCCTTCTCGACATTGCTTTTGTGCCTGATGATTTGGACCATGGCTTCCTTTTGGGGACTAGGCAAACCATTTTAGAGACAAAAGATGGTGGAAGAACATGGGCTCCACGTTCAATACCCTCGGCTGAAGAAGAAGACTTTAACTACCGATTTAATTCAATTAGCTTCAAAGGAAAGGAGGGATGGATTGTTGGCAAGCCTGCAATTCTGTTGTACACTTCGGATGCTGGAGAAAGTTGGCAAAGGATACCTCTTAGTGCTCAGCTTCCTGGAGATATGGTCTACATTAAAGCAACTGGAGAAAAAAGTGCAGAGATGGTTACTGATGAAGGTGCAATTTATGTTACATCTAACAAGGGATATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTTAATAGAACAGTTTCTAGTGGTATAAGTGGTGCAAGCTATTATACTGGAACCTTTAACACAGTAAATCGCTCTCCTGATGGCCGTTATGTAGCTGTTTCAAGTCGTGGTAACTTCTACCTCACCTGGGAGCCTGGGCAGCCATTCTGGCAGCCACATAATAGAGCTATTGCAAGGAGGATTCAGAACATGGGGTGGAGAGCTGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTCTTAGTAAAGGGACAGGGATAACTGAGGAGTTTGAAGAAGTTCCAGTTCAAAGTCGAGGTTTTGGCATATTAGATGTCGGTTATCGGTCAAAGGAAGAGGCTTGGGCAGCTGGGGGAAGTGGAGTACTTCTGAAAACTACAAATGGTGGCAGGACATGGACCCGTGATAAAGCAGCTGACAATATTGCAGCCAACCTATACTCTGTAAAGTTTATAAACGATAAGAAAGGTTTTGTGCTCGGAAATGATGGGGTGTTACTTCAATATCTTGGTTGA

Protein sequence

MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQFVAETAAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQRIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG

Homology

[Close]

BLAST of CmUC09G164250 vs. NCBI nr
Match: KAA0058574.1 (photosystem II stability/assembly factor HCF136 [Cucumis melo var. makuwa] >TYK10374.1 photosystem II stability/assembly factor HCF136 [Cucumis melo var. makuwa])

HSP 1 Score: 786.9 bits (2031), Expect = 8.0e-224
Identity = 391/405 (96.54%), Postives = 400/405 (98.77%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQFVAET 60
           MATLQQQLLKPSWTSSLFASSSPRHSLSQPQL  RT++ST+PKASL NSSINRRQFVA+T
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLLPRTISSTSPKASLHNSSINRRQFVADT 60

Query: 61  AAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQ 120
           AAAVSLSLSP I+PVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDL+HGFLLGTRQ
Sbjct: 61  AAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQR 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW+R
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300
           ISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA
Sbjct: 241 ISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLFLSKGTGI+EEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360

Query: 361 TNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           TNGGR+WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of CmUC09G164250 vs. NCBI nr
Match: XP_008461367.1 (PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis melo])

HSP 1 Score: 785.4 bits (2027), Expect = 2.3e-223
Identity = 390/405 (96.30%), Postives = 400/405 (98.77%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQFVAET 60
           MATLQQQLLKPSWTSSLFASSSPRHSLSQPQL  RT++ST+PKASL NSSINRRQFVA+T
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLLPRTISSTSPKASLHNSSINRRQFVADT 60

Query: 61  AAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQ 120
           AAAVSLSLSP I+PVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDL+HGFLLGTRQ
Sbjct: 61  AAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQR 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW+R
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300
           ISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA
Sbjct: 241 ISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLFLSKGTGI+EEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360

Query: 361 TNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           TNGGR+WTRDKAADNIAANLYSVKFIN+KKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRSWTRDKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of CmUC09G164250 vs. NCBI nr
Match: XP_004135957.1 (photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis sativus] >KGN45080.1 hypothetical protein Csa_016138 [Cucumis sativus])

HSP 1 Score: 784.3 bits (2024), Expect = 5.2e-223
Identity = 392/406 (96.55%), Postives = 400/406 (98.52%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASS-SPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQFVAE 60
           MATLQQQLLKPSWTSSLFASS SPRHSLSQPQL  RTL+STTPKASL NSSINRR FVA+
Sbjct: 1   MATLQQQLLKPSWTSSLFASSTSPRHSLSQPQLLPRTLSSTTPKASLHNSSINRRHFVAD 60

Query: 61  TAAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120
           TAAAVSLSLSP I+PVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDD++HGFLLGTR
Sbjct: 61  TAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDMNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQ 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW+
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWE 180

Query: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 ADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK 360
           ADGGLWLLVRGGGLFLSKGTGI+EEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK 360

Query: 361 TTNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           TTNGGR+WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406

[Close]

BLAST of CmUC09G164250 vs. NCBI nr
Match: XP_038900067.1 (photosystem II stability/assembly factor HCF136, chloroplastic [Benincasa hispida])

HSP 1 Score: 777.7 bits (2007), Expect = 4.9e-221
Identity = 392/405 (96.79%), Postives = 396/405 (97.78%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQFVAET 60
           MATLQQQ LKPS TSSLFASS      SQPQLQ RTLTSTTPKASLQNSSINRRQFVAET
Sbjct: 1   MATLQQQFLKPSLTSSLFASS------SQPQLQPRTLTSTTPKASLQNSSINRRQFVAET 60

Query: 61  AAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQ 120
           AAAVSLSLSPLI+PVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQ
Sbjct: 61  AAAVSLSLSPLIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQR 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW+R
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300
           ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA
Sbjct: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLFLSKGTGI+EEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360

Query: 361 TNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           TNGGR+WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 399

[Close]

BLAST of CmUC09G164250 vs. NCBI nr
Match: KAG7025624.1 (Photosystem II stability/assembly factor, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 761.1 bits (1964), Expect = 4.7e-216
Identity = 382/408 (93.63%), Postives = 397/408 (97.30%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASSSPRH---SLSQPQLQSRTLTSTTPKASLQNSSINRRQFV 60
           MATL QQLL+PSW    FASSSPRH   SLSQPQLQ RT+ S TPKAS++NSSINRR+FV
Sbjct: 1   MATL-QQLLRPSW----FASSSPRHSFTSLSQPQLQPRTVNSVTPKASIKNSSINRREFV 60

Query: 61  AETAAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLG 120
           AETAAAVSLSLSPLI+PV+PAKSEE+LS+WERLYLPIDPGVVLLDIAFVPDDL+HGFLLG
Sbjct: 61  AETAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLG 120

Query: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 180
           TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISF+GKEGWIVGKPAILLYTSDAGES
Sbjct: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGES 180

Query: 181 WQRIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240
           W+RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV
Sbjct: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240

Query: 241 SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300
           SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG
Sbjct: 241 SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300

Query: 301 WRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL 360
           WRADGGLWLLVRGGGLFLSKGTGI+E+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL
Sbjct: 301 WRADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL 360

Query: 361 LKTTNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           LKTTNGG+TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 LKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]

BLAST of CmUC09G164250 vs. ExPASy Swiss-Prot
Match: O82660 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF136 PE=1 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 5.7e-180
Identity = 317/409 (77.51%), Postives = 359/409 (87.78%), Query Frame = 0


Query: 1   MATLQ----QQLLKPSWTSSLFASSSPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQF 60
           MA+LQ      L KPS  S  F S    H L  P+  S    S +P +S  + S +RR+ 
Sbjct: 1   MASLQLCDGYLLFKPS-VSPRFLSQRISHRLI-PKASSSPPPSPSPSSSSSSLSFSRREL 60

Query: 61  VAETAAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLL 120
           + + +AAVSLSLS ++    PA+++E LSEWER++LPIDPGVVLLDIAFVPD+   GFLL
Sbjct: 61  LYQ-SAAVSLSLSSIVG---PARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGFLL 120

Query: 121 GTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE 180
           GTRQT+LETKDGG TW PRSIPSAEEEDFNYRFNSISFKGKEGWI+GKPAILLYT+DAGE
Sbjct: 121 GTRQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADAGE 180

Query: 181 SWQRIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRT 240
           +W RIPLS+QLPGDMV+IKAT +KSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLNRT
Sbjct: 181 NWDRIPLSSQLPGDMVFIKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRT 240

Query: 241 VSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNM 300
           VSSGISGASYYTGTF+ VNRSPDGRYVAVSSRGNF+LTWEPGQP+WQPHNRA+ARRIQNM
Sbjct: 241 VSSGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQNM 300

Query: 301 GWRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGV 360
           GWRADGGLWLLVRGGGL+LSKGTGITEEFEEVPVQSRGFGILDVGYRS+EEAWAAGGSG+
Sbjct: 301 GWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGSGI 360

Query: 361 LLKTTNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           LL+T NGG++W RDKAADNIAANLY+VKF++DKKGFVLGNDGVLL+Y+G
Sbjct: 361 LLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403

[Close]

BLAST of CmUC09G164250 vs. ExPASy Swiss-Prot
Match: Q5Z5A8 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HCF136 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 1.0e-176
Identity = 307/390 (78.72%), Postives = 337/390 (86.41%), Query Frame = 0


Query: 42  PKASLQNSSINRRQFVAETA-AAVSLSLSPLISPVQP---AKSEESLSEWERLYLPIDPG 101
           P+A   + S  RR+F+A+TA A+ + ++ PL+ P  P   A    SLSEWER+ LPIDPG
Sbjct: 27  PRAHTDSISTGRRRFIADTATASAAAAVGPLVLPRTPLARADQPPSLSEWERVLLPIDPG 86

Query: 102 VVLLDIAFVPDDLDHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGK 161
           VVLLDIAFVPDD  HGFLLGTRQTILETK+GG TW PRSIPSAE+EDFNYRFNS+SF GK
Sbjct: 87  VVLLDIAFVPDDPSHGFLLGTRQTILETKNGGNTWFPRSIPSAEDEDFNYRFNSVSFMGK 146

Query: 162 EGWIVGKPAILLYTSDAGESWQRIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNK 221
           EGWI+GKPAILL+TSDAG+SW+RIPLSAQLPG+MVYIKATGE+SAEMVTDEGAIYVTSN+
Sbjct: 147 EGWIIGKPAILLHTSDAGDSWERIPLSAQLPGNMVYIKATGEQSAEMVTDEGAIYVTSNR 206

Query: 222 GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEP 281
           GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEP
Sbjct: 207 GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEP 266

Query: 282 GQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTG----------------- 341
           GQPFWQPHNRA+ARRIQNMGWRADGGLWLLVRGGGLFLSKG+G                 
Sbjct: 267 GQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGSGFQFFYRGLNDAHAISYL 326

Query: 342 -----ITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRTWTRDKAADN 401
                ITE+FEE  VQSRGFGILDVGYRSK+EAWAAGGSGVLLKTTNGG+TW RDKAADN
Sbjct: 327 HPPNQITEDFEEASVQSRGFGILDVGYRSKDEAWAAGGSGVLLKTTNGGKTWVRDKAADN 386

Query: 402 IAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           IAANLYSVKF+ D KG+VLGNDGVLL+Y+G
Sbjct: 387 IAANLYSVKFLGDNKGYVLGNDGVLLRYVG 416

[Close]

BLAST of CmUC09G164250 vs. ExPASy Swiss-Prot
Match: Q9AW48 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia theta OX=55529 GN=hcf136 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.3e-95
Identity = 165/362 (45.58%), Postives = 245/362 (67.68%), Query Frame = 0


Query: 51  INRRQFVAETAAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDL 110
           INR +F       ++  L P ++ + P  +  + + W ++ LP+D   VL DI F   + 
Sbjct: 42  INRTKF-------INYLLYPTLTSLYPKFTHANTTSWTKVDLPVDS--VLFDIEFTDPEC 101

Query: 111 DHGFLLGTRQTILETKDGGRTWAPRSIPSAE-EEDFNYRFNSISFKGKEGWIVGKPAILL 170
            HG+L+G++ T LET DGG TW PR+  + + +E+  YRF +ISF+G+EGW++GKPAI+L
Sbjct: 102 KHGWLVGSKGTFLETDDGGNTWVPRTFANLDPDEELTYRFENISFEGQEGWVIGKPAIIL 161

Query: 171 YTSDAGESWQRIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETV 230
           YT D G++W R+P+S +LPG+   IKA G +SAE+ T  GAIYVT+N G NWKA V+ET+
Sbjct: 162 YTKDGGKTWFRVPVSPKLPGEPCLIKALGSESAELTTTSGAIYVTNNAGRNWKAQVKETI 221

Query: 231 SATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAI 290
            +TLNRT+SSG+SGASY+TG    V R+ +G+Y+A+SSRGNFYLTWEPGQ FW P  R  
Sbjct: 222 DSTLNRTISSGVSGASYFTGNVINVIRNSEGKYLAISSRGNFYLTWEPGQDFWIPRARET 281

Query: 291 ARRIQNMGWRADG---GLWLLVRGGGLFLSKGTGITE-----EFEEVPVQSRGFGILDVG 350
           +RRIQ+MG+  +    G+W+  RGGGL +S      E      FE + +++ G+GILD  
Sbjct: 282 SRRIQSMGFIQNDNQKGIWMSTRGGGLSVSTKNFDFESISSFNFENIDIKTGGYGILDAA 341

Query: 351 YRSKEEAWAAGGSGVLLKTTNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLL 404
           + + ++ W   G G++  +T+ G+ WT+    D ++ NLY +KF+N+ KGF+LG++G+LL
Sbjct: 342 FVNDKDIWIICGGGIVYNSTDKGKNWTKVDGIDKLSGNLYKIKFVNNNKGFILGSNGLLL 394

[Close]

BLAST of CmUC09G164250 vs. ExPASy Swiss-Prot
Match: P73069 (Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr2034 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.7e-80
Identity = 154/322 (47.83%), Postives = 204/322 (63.35%), Query Frame = 0


Query: 83  SLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQTILETKDGGRTWAPRSIPSAEE 142
           + + W+ + L  D      DIAF  +D +HG+L+GT++TI ET DGG TW  + I   EE
Sbjct: 36  AFNPWQEIALETDS--TFADIAFT-EDPNHGWLVGTKETIFETTDGGDTWEQKLIDLGEE 95

Query: 143 EDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQRIPLSAQLPGDMVYIKATGEKSA 202
           +     F+++SF G EGWI GKP+ILL+T+D G++W RIPLS +LPG    I A G ++A
Sbjct: 96  K---ASFSAVSFSGNEGWITGKPSILLHTTDGGQTWARIPLSEKLPGAPYSIIALGPQTA 155

Query: 203 EMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRY 262
           EM+TD GAIY T+N G NWKA V+  V                   G   T+ RS DGRY
Sbjct: 156 EMITDLGAIYKTTNGGKNWKALVEGAV-------------------GVARTIQRSTDGRY 215

Query: 263 VAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGIT 322
           VAVS+RGNFY TW PGQ  W PHNR  +RR+Q MG+  DG LWLL RGG L  S      
Sbjct: 216 VAVSARGNFYSTWAPGQTEWTPHNRNSSRRLQTMGYGKDGQLWLLARGGQLQFSTDPDAE 275

Query: 323 EEFEEVPVQSRG-FGILDVGYRSKEEAWAAGGSGVLLKTTNGGRTWTRDKAADNIAANLY 382
           E  + +  Q +G +G+LD+ +R+ EE W AG SG LL + +GG+TW +D   ++I ANLY
Sbjct: 276 EWSDVIAPQDKGSWGLLDLSFRTPEEVWVAGASGNLLMSQDGGQTWAKDTGVEDIPANLY 332

Query: 383 SVKFINDKKGFVLGNDGVLLQY 404
            V F++ +KGFVLG DG+LL+Y
Sbjct: 336 RVVFLSPEKGFVLGQDGILLKY 332

[Close]

BLAST of CmUC09G164250 vs. ExPASy Swiss-Prot
Match: Q8DI95 (Ycf48-like protein OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tll1695 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 7.4e-79
Identity = 149/343 (43.44%), Postives = 209/343 (60.93%), Query Frame = 0


Query: 64  VSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQTIL 123
           VSLS   L  P          + WE + LP      +LD++F+  D  HG+L+G   T++
Sbjct: 30  VSLSTPALAIPAL------DYNPWEAIQLPTT--ATILDMSFI--DRHHGWLVGVNATLM 89

Query: 124 ETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQRIPL 183
           ET+DGG+TW PR++     +  +YRFNS+SF+G EGWIVG+P I+L+T+D G+SW +IPL
Sbjct: 90  ETRDGGQTWEPRTLVL---DHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPL 149

Query: 184 SAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISG 243
             +LPG    IKA G  SAEM+T+ GAIY T + G NW+A VQE +              
Sbjct: 150 DPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAI-------------- 209

Query: 244 ASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGG 303
                G    +NRSP G YVAVSSRG+FY TWEPGQ  W+PHNR  +RR+ NMG+  DG 
Sbjct: 210 -----GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR 269

Query: 304 LWLLVRGGGLFLSKGTGITEEFEEV--PVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTT 363
           LW++V GG +  S     +E + E+  P++    G LD+ YR+  E W AGG+G LL + 
Sbjct: 270 LWMIVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQ 329

Query: 364 NGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYL 405
           +GG+TW +D     + +N Y + F +  +GF+LG  G+LL+Y+
Sbjct: 330 DGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 339

[Close]

BLAST of CmUC09G164250 vs. ExPASy TrEMBL
Match: A0A5D3CGP8 (Photosystem II stability/assembly factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00160 PE=3 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 3.9e-224
Identity = 391/405 (96.54%), Postives = 400/405 (98.77%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQFVAET 60
           MATLQQQLLKPSWTSSLFASSSPRHSLSQPQL  RT++ST+PKASL NSSINRRQFVA+T
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLLPRTISSTSPKASLHNSSINRRQFVADT 60

Query: 61  AAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQ 120
           AAAVSLSLSP I+PVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDL+HGFLLGTRQ
Sbjct: 61  AAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQR 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW+R
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300
           ISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA
Sbjct: 241 ISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLFLSKGTGI+EEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360

Query: 361 TNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           TNGGR+WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of CmUC09G164250 vs. ExPASy TrEMBL
Match: A0A1S3CFV0 (Photosystem II stability/assembly factor OS=Cucumis melo OX=3656 GN=LOC103499970 PE=3 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.1e-223
Identity = 390/405 (96.30%), Postives = 400/405 (98.77%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQFVAET 60
           MATLQQQLLKPSWTSSLFASSSPRHSLSQPQL  RT++ST+PKASL NSSINRRQFVA+T
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLLPRTISSTSPKASLHNSSINRRQFVADT 60

Query: 61  AAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQ 120
           AAAVSLSLSP I+PVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDL+HGFLLGTRQ
Sbjct: 61  AAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQR 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW+R
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300
           ISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA
Sbjct: 241 ISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLFLSKGTGI+EEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360

Query: 361 TNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           TNGGR+WTRDKAADNIAANLYSVKFIN+KKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRSWTRDKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of CmUC09G164250 vs. ExPASy TrEMBL
Match: A0A0A0K5Y1 (Photosystem II stability/assembly factor OS=Cucumis sativus OX=3659 GN=Csa_7G420730 PE=3 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 2.5e-223
Identity = 392/406 (96.55%), Postives = 400/406 (98.52%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASS-SPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQFVAE 60
           MATLQQQLLKPSWTSSLFASS SPRHSLSQPQL  RTL+STTPKASL NSSINRR FVA+
Sbjct: 1   MATLQQQLLKPSWTSSLFASSTSPRHSLSQPQLLPRTLSSTTPKASLHNSSINRRHFVAD 60

Query: 61  TAAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTR 120
           TAAAVSLSLSP I+PVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDD++HGFLLGTR
Sbjct: 61  TAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDMNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQ 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESW+
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWE 180

Query: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 ADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK 360
           ADGGLWLLVRGGGLFLSKGTGI+EEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK 360

Query: 361 TTNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           TTNGGR+WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406

[Close]

BLAST of CmUC09G164250 vs. ExPASy TrEMBL
Match: A0A6J1JT27 (Photosystem II stability/assembly factor OS=Cucurbita maxima OX=3661 GN=LOC111488086 PE=3 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 6.6e-216
Identity = 383/405 (94.57%), Postives = 390/405 (96.30%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQFVAET 60
           MATL QQLLKPSW+SSLFASSSPRHSLS          STTPKASLQNSSINRRQFVAET
Sbjct: 1   MATL-QQLLKPSWSSSLFASSSPRHSLS----------STTPKASLQNSSINRRQFVAET 60

Query: 61  AAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLGTRQ 120
           AA VSLSLSP I+PV PAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLD GFLLGTRQ
Sbjct: 61  AATVSLSLSPFITPVPPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWQR 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWIVGKPAILLYTSDAGESW+R
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300
           ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA
Sbjct: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLFLSKGTGI+EEFEEVPVQSRGFGILDVG+RS+EEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGFRSQEEAWAAGGSGVLLKT 360

Query: 361 TNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           TNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 394

[Close]

BLAST of CmUC09G164250 vs. ExPASy TrEMBL
Match: A0A6J1H8H0 (Photosystem II stability/assembly factor OS=Cucurbita moschata OX=3662 GN=LOC111460613 PE=3 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 8.7e-216
Identity = 380/408 (93.14%), Postives = 397/408 (97.30%), Query Frame = 0


Query: 1   MATLQQQLLKPSWTSSLFASSSPRH---SLSQPQLQSRTLTSTTPKASLQNSSINRRQFV 60
           MAT+ QQLL+PSW    FASSSPRH   SLSQPQ+Q RT+ S TPKAS++NSSINRR+FV
Sbjct: 1   MATM-QQLLRPSW----FASSSPRHSFTSLSQPQVQPRTVNSVTPKASIKNSSINRREFV 60

Query: 61  AETAAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLLG 120
           AETAAAVSLSLSPLI+PV+PAKSEE+LS+WERLYLPIDPGVVLLDIAFVPDDL+HGFLLG
Sbjct: 61  AETAAAVSLSLSPLIAPVKPAKSEENLSQWERLYLPIDPGVVLLDIAFVPDDLNHGFLLG 120

Query: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGES 180
           TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISF+GKEGWIVGKPAILLYTSDAGES
Sbjct: 121 TRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFQGKEGWIVGKPAILLYTSDAGES 180

Query: 181 WQRIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240
           W+RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV
Sbjct: 181 WERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTV 240

Query: 241 SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300
           SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG
Sbjct: 241 SSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMG 300

Query: 301 WRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL 360
           WRADGGLWLLVRGGGLFLSKGTGI+E+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL
Sbjct: 301 WRADGGLWLLVRGGGLFLSKGTGISEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVL 360

Query: 361 LKTTNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           LKTTNGG+TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 LKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 403

[Close]

BLAST of CmUC09G164250 vs. TAIR 10
Match: AT5G23120.1 (photosystem II stability/assembly factor, chloroplast (HCF136) )

HSP 1 Score: 631.7 bits (1628), Expect = 4.0e-181
Identity = 317/409 (77.51%), Postives = 359/409 (87.78%), Query Frame = 0


Query: 1   MATLQ----QQLLKPSWTSSLFASSSPRHSLSQPQLQSRTLTSTTPKASLQNSSINRRQF 60
           MA+LQ      L KPS  S  F S    H L  P+  S    S +P +S  + S +RR+ 
Sbjct: 1   MASLQLCDGYLLFKPS-VSPRFLSQRISHRLI-PKASSSPPPSPSPSSSSSSLSFSRREL 60

Query: 61  VAETAAAVSLSLSPLISPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDHGFLL 120
           + + +AAVSLSLS ++    PA+++E LSEWER++LPIDPGVVLLDIAFVPD+   GFLL
Sbjct: 61  LYQ-SAAVSLSLSSIVG---PARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGFLL 120

Query: 121 GTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGE 180
           GTRQT+LETKDGG TW PRSIPSAEEEDFNYRFNSISFKGKEGWI+GKPAILLYT+DAGE
Sbjct: 121 GTRQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADAGE 180

Query: 181 SWQRIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRT 240
           +W RIPLS+QLPGDMV+IKAT +KSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLNRT
Sbjct: 181 NWDRIPLSSQLPGDMVFIKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRT 240

Query: 241 VSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNM 300
           VSSGISGASYYTGTF+ VNRSPDGRYVAVSSRGNF+LTWEPGQP+WQPHNRA+ARRIQNM
Sbjct: 241 VSSGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQNM 300

Query: 301 GWRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGV 360
           GWRADGGLWLLVRGGGL+LSKGTGITEEFEEVPVQSRGFGILDVGYRS+EEAWAAGGSG+
Sbjct: 301 GWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGSGI 360

Query: 361 LLKTTNGGRTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406
           LL+T NGG++W RDKAADNIAANLY+VKF++DKKGFVLGNDGVLL+Y+G
Sbjct: 361 LLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403

The following BLAST results are available for this feature:

BLAST of CmUC09G164250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058574.1	8.0e-224	96.54	photosystem II stability/assembly factor HCF136 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_008461367.1	2.3e-223	96.30	PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Cucum...	[more]
XP_004135957.1	5.2e-223	96.55	photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis sativus]...	[more]
XP_038900067.1	4.9e-221	96.79	photosystem II stability/assembly factor HCF136, chloroplastic [Benincasa hispid...	[more]
KAG7025624.1	4.7e-216	93.63	Photosystem II stability/assembly factor, chloroplastic [Cucurbita argyrosperma ...	[more]

BLAST of CmUC09G164250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82660	5.7e-180	77.51	Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis th...	[more]
Q5Z5A8	1.0e-176	78.72	Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa s...	[more]
Q9AW48	3.3e-95	45.58	Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia the...	[more]
P73069	1.7e-80	47.83	Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]
Q8DI95	7.4e-79	43.44	Ycf48-like protein OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=t...	[more]

BLAST of CmUC09G164250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CGP8	3.9e-224	96.54	Photosystem II stability/assembly factor OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CFV0	1.1e-223	96.30	Photosystem II stability/assembly factor OS=Cucumis melo OX=3656 GN=LOC103499970...	[more]
A0A0A0K5Y1	2.5e-223	96.55	Photosystem II stability/assembly factor OS=Cucumis sativus OX=3659 GN=Csa_7G420...	[more]
A0A6J1JT27	6.6e-216	94.57	Photosystem II stability/assembly factor OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1H8H0	8.7e-216	93.14	Photosystem II stability/assembly factor OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CmUC09G164250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23120.1	4.0e-181	77.51	photosystem II stability/assembly factor, chloroplast (HCF136)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028203	Photosynthesis system II assembly factor Ycf48/Hcf136-like domain	PFAM	PF14870	PSII_BNR	coord: 82..403 e-value: 2.9E-124 score: 414.3
IPR016705	Photosynthesis system II assembly factor Ycf48/Hcf136	PIRSF	PIRSF017875	Photosystem_II_Ycf48-like	coord: 47..405 e-value: 4.1E-148 score: 490.6
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 79..302 e-value: 6.4E-8 score: 33.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..46
None	No IPR available	PANTHER	PTHR47199	PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC	coord: 45..405
None	No IPR available	SUPERFAMILY	110296	Oligoxyloglucan reducing end-specific cellobiohydrolase	coord: 87..404

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC09G164250.1	CmUC09G164250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding