CmUC09G164070 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC09G164070
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Histone superfamily protein
Location	CmU531Chr09: 3638891 .. 3639461 (-)
RNA-Seq Expression	CmUC09G164070
Synteny	CmUC09G164070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAGCCTTCGCGCTCGCAAAGCCGAAAATTTCAAACCTTCCCGCTTTTCCTTTAACACAACCCTTATATATTCGCCCCCAAGTCTTCAAACCTCATCACGGAAATTTCAGATAGTCGTACCAAATTCCTCAAGTTTTGTCAAACGAATCTCCCCGAATGGCTCGCACCAAGCAAACCGCCAGAAAATCCACCGGAGGTAAGGCCCCAAGGAAGCAACTAGCCACCAAAGCTGCCCGGAAGTCAGCTCCAGCTACCGGTGGAGTGAAGAAGCCCCACCGCTTCCGCCCTGGAACCGTTGCACTTCGTGAGATCCGTAAGTACCAAAAGAGCACTGAGCTTTTGATCCGCAAGCTACCGTTTCAGCGGTTGGTTCGTGAGATCGCACAGGATTTCAAGACCGATCTGAGGTTCCAGAGTAGCGCCGTGGCGGCGCTACAAGAGGCGGCGGAAGCCTACCTGGTCGGTCTATTCGAAGATACGAATCTGTGCGCGATTCATGCGAAGAGAGTCACCATTATGCCTAAGGATATTCAATTGGCCAGGAGGATTAGAGGGGAAAGGGCTTAA

mRNA sequence

ATGTCGTACCAAATTCCTCAAGTTTTGTCAAACGAATCTCCCCGAATGGCTCGCACCAAGCAAACCGCCAGAAAATCCACCGGAGGTAAGGCCCCAAGGAAGCAACTAGCCACCAAAGCTGCCCGGAAGTCAGCTCCAGCTACCGGTGGAGTGAAGAAGCCCCACCGCTTCCGCCCTGGAACCGTTGCACTTCGTGAGATCCGTAAGTACCAAAAGAGCACTGAGCTTTTGATCCGCAAGCTACCGTTTCAGCGGTTGGTTCGTGAGATCGCACAGGATTTCAAGACCGATCTGAGGTTCCAGAGTAGCGCCGTGGCGGCGCTACAAGAGGCGGCGGAAGCCTACCTGGTCGGTCTATTCGAAGATACGAATCTGTGCGCGATTCATGCGAAGAGAGTCACCATTATGCCTAAGGATATTCAATTGGCCAGGAGGATTAGAGGGGAAAGGGCTTAA

Coding sequence (CDS)

ATGTCGTACCAAATTCCTCAAGTTTTGTCAAACGAATCTCCCCGAATGGCTCGCACCAAGCAAACCGCCAGAAAATCCACCGGAGGTAAGGCCCCAAGGAAGCAACTAGCCACCAAAGCTGCCCGGAAGTCAGCTCCAGCTACCGGTGGAGTGAAGAAGCCCCACCGCTTCCGCCCTGGAACCGTTGCACTTCGTGAGATCCGTAAGTACCAAAAGAGCACTGAGCTTTTGATCCGCAAGCTACCGTTTCAGCGGTTGGTTCGTGAGATCGCACAGGATTTCAAGACCGATCTGAGGTTCCAGAGTAGCGCCGTGGCGGCGCTACAAGAGGCGGCGGAAGCCTACCTGGTCGGTCTATTCGAAGATACGAATCTGTGCGCGATTCATGCGAAGAGAGTCACCATTATGCCTAAGGATATTCAATTGGCCAGGAGGATTAGAGGGGAAAGGGCTTAA

Protein sequence

MSYQIPQVLSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Homology

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BLAST of CmUC09G164070 vs. NCBI nr
Match: XP_023514535.1 (histone H3.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.3 bits (669), Expect = 2.6e-66
Identity = 142/149 (95.30%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 3   YQIPQVLSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTV 62
           YQ  Q+LS +  RMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTV
Sbjct: 79  YQNLQILSFQFTRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTV 138

Query: 63  ALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFED 122
           ALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFED
Sbjct: 139 ALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFED 198

Query: 123 TNLCAIHAKRVTIMPKDIQLARRIRGERA 152
           TNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 199 TNLCAIHAKRVTIMPKDIQLARRIRGERA 227

[Close]

BLAST of CmUC09G164070 vs. NCBI nr
Match: XP_008461433.1 (PREDICTED: histone H3.v1-like [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 5.7e-66
Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 4   QIPQVLSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVA 63
           QI Q L  + PRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVA
Sbjct: 184 QIFQFLLYQFPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVA 243

Query: 64  LREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDT 123
           LREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDT
Sbjct: 244 LREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDT 303

Query: 124 NLCAIHAKRVTIMPKDIQLARRIRGERA 152
           NLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 304 NLCAIHAKRVTIMPKDIQLARRIRGERA 331

[Close]

BLAST of CmUC09G164070 vs. NCBI nr
Match: PWS23171.1 (hypothetical protein DKP78_14540, partial [Enterococcus faecium])

HSP 1 Score: 259.2 bits (661), Expect = 2.2e-65
Identity = 140/151 (92.72%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MSYQIPQVLSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 60
           ++  IP   S  S +MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG
Sbjct: 9   LALPIPSSSSQSSSQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 68

Query: 61  TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLF 120
           TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLF
Sbjct: 69  TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLF 128

Query: 121 EDTNLCAIHAKRVTIMPKDIQLARRIRGERA 152
           EDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 129 EDTNLCAIHAKRVTIMPKDIQLARRIRGERA 159

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BLAST of CmUC09G164070 vs. NCBI nr
Match: KDP20192.1 (hypothetical protein JCGZ_07912 [Jatropha curcas])

HSP 1 Score: 258.1 bits (658), Expect = 4.8e-65
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 7   QVLSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE 66
           Q+L+  S  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE
Sbjct: 82  QILTFRSTAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE 141

Query: 67  IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 126
           IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC
Sbjct: 142 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 201

Query: 127 AIHAKRVTIMPKDIQLARRIRGERA 152
           AIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 202 AIHAKRVTIMPKDIQLARRIRGERA 226

[Close]

BLAST of CmUC09G164070 vs. NCBI nr
Match: XP_022154562.1 (uncharacterized protein LOC111021800 [Momordica charantia])

HSP 1 Score: 257.3 bits (656), Expect = 8.2e-65
Identity = 139/143 (97.20%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 9   LSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIR 68
           L N   RMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIR
Sbjct: 216 LHNPFDRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIR 275

Query: 69  KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAI 128
           KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAI
Sbjct: 276 KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAI 335

Query: 129 HAKRVTIMPKDIQLARRIRGERA 152
           HAKRVTIMPKDIQLARRIRGERA
Sbjct: 336 HAKRVTIMPKDIQLARRIRGERA 358

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BLAST of CmUC09G164070 vs. ExPASy Swiss-Prot
Match: P59226 (Histone H3.2 OS=Arabidopsis thaliana OX=3702 GN=HTR2 PE=1 SV=2)

HSP 1 Score: 254.2 bits (648), Expect = 9.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

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BLAST of CmUC09G164070 vs. ExPASy Swiss-Prot
Match: Q6LBE3 (Histone H3.2 OS=Asparagus officinalis OX=4686 PE=2 SV=3)

HSP 1 Score: 254.2 bits (648), Expect = 9.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmUC09G164070 vs. ExPASy Swiss-Prot
Match: Q6LCK1 (Histone H3.2 OS=Brassica napus OX=3708 PE=2 SV=3)

HSP 1 Score: 254.2 bits (648), Expect = 9.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmUC09G164070 vs. ExPASy Swiss-Prot
Match: Q71T45 (Histone H3.2 OS=Euphorbia esula OX=3993 GN=H3 PE=2 SV=3)

HSP 1 Score: 254.2 bits (648), Expect = 9.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmUC09G164070 vs. ExPASy Swiss-Prot
Match: P69246 (Histone H3.2 OS=Zea mays OX=4577 GN=H3C2 PE=1 SV=2)

HSP 1 Score: 254.2 bits (648), Expect = 9.1e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmUC09G164070 vs. ExPASy TrEMBL
Match: A0A1S3CEM6 (Histone H3.2 OS=Cucumis melo OX=3656 GN=LOC103500030 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-66
Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 4   QIPQVLSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVA 63
           QI Q L  + PRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVA
Sbjct: 184 QIFQFLLYQFPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVA 243

Query: 64  LREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDT 123
           LREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDT
Sbjct: 244 LREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDT 303

Query: 124 NLCAIHAKRVTIMPKDIQLARRIRGERA 152
           NLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 304 NLCAIHAKRVTIMPKDIQLARRIRGERA 331

[Close]

BLAST of CmUC09G164070 vs. ExPASy TrEMBL
Match: K3YZS7 (Histone domain-containing protein OS=Setaria italica OX=4555 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 6   PQVLSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALR 65
           P   +++ P MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALR
Sbjct: 19  PSSATHQKPAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALR 78

Query: 66  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNL 125
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNL
Sbjct: 79  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNL 138

Query: 126 CAIHAKRVTIMPKDIQLARRIRGERA 152
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 139 CAIHAKRVTIMPKDIQLARRIRGERA 164

[Close]

BLAST of CmUC09G164070 vs. ExPASy TrEMBL
Match: A0A067J8V0 (Histone H3.2 OS=Jatropha curcas OX=180498 GN=JCGZ_07912 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-65
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 7   QVLSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE 66
           Q+L+  S  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE
Sbjct: 82  QILTFRSTAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALRE 141

Query: 67  IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 126
           IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC
Sbjct: 142 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 201

Query: 127 AIHAKRVTIMPKDIQLARRIRGERA 152
           AIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 202 AIHAKRVTIMPKDIQLARRIRGERA 226

[Close]

BLAST of CmUC09G164070 vs. ExPASy TrEMBL
Match: A0A287PH36 (Histone domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.1e-65
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 10  SNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK 69
           SN +P MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK
Sbjct: 17  SNGAPPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK 76

Query: 70  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIH 129
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 77  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIH 136

Query: 130 AKRVTIMPKDIQLARRIRGERA 152
           AKRVTIMPKDIQLARRIRGERA
Sbjct: 137 AKRVTIMPKDIQLARRIRGERA 158

[Close]

BLAST of CmUC09G164070 vs. ExPASy TrEMBL
Match: K7U3E1 (Histone H3.2 OS=Zea mays OX=4577 GN=103638044 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.0e-65
Identity = 141/146 (96.58%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 6   PQVLSNESPRMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALR 65
           P  LS  SP MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALR
Sbjct: 27  PPALSQLSP-MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALR 86

Query: 66  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNL 125
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNL
Sbjct: 87  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNL 146

Query: 126 CAIHAKRVTIMPKDIQLARRIRGERA 152
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 147 CAIHAKRVTIMPKDIQLARRIRGERA 171

[Close]

BLAST of CmUC09G164070 vs. TAIR 10
Match: AT1G09200.1 (Histone superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 6.5e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmUC09G164070 vs. TAIR 10
Match: AT3G27360.1 (Histone superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 6.5e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmUC09G164070 vs. TAIR 10
Match: AT5G10390.1 (Histone superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 6.5e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmUC09G164070 vs. TAIR 10
Match: AT5G10400.1 (Histone superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 6.5e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of CmUC09G164070 vs. TAIR 10
Match: AT5G65360.1 (Histone superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 6.5e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 75
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 76  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 135
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 136 MPKDIQLARRIRGERA 152
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:

BLAST of CmUC09G164070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514535.1	2.6e-66	95.30	histone H3.2-like [Cucurbita pepo subsp. pepo]	[more]
XP_008461433.1	5.7e-66	95.95	PREDICTED: histone H3.v1-like [Cucumis melo]	[more]
PWS23171.1	2.2e-65	92.72	hypothetical protein DKP78_14540, partial [Enterococcus faecium]	[more]
KDP20192.1	4.8e-65	95.86	hypothetical protein JCGZ_07912 [Jatropha curcas]	[more]
XP_022154562.1	8.2e-65	97.20	uncharacterized protein LOC111021800 [Momordica charantia]	[more]

BLAST of CmUC09G164070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59226	9.1e-67	100.00	Histone H3.2 OS=Arabidopsis thaliana OX=3702 GN=HTR2 PE=1 SV=2	[more]
Q6LBE3	9.1e-67	100.00	Histone H3.2 OS=Asparagus officinalis OX=4686 PE=2 SV=3	[more]
Q6LCK1	9.1e-67	100.00	Histone H3.2 OS=Brassica napus OX=3708 PE=2 SV=3	[more]
Q71T45	9.1e-67	100.00	Histone H3.2 OS=Euphorbia esula OX=3993 GN=H3 PE=2 SV=3	[more]
P69246	9.1e-67	100.00	Histone H3.2 OS=Zea mays OX=4577 GN=H3C2 PE=1 SV=2	[more]

BLAST of CmUC09G164070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CEM6	2.8e-66	95.95	Histone H3.2 OS=Cucumis melo OX=3656 GN=LOC103500030 PE=3 SV=1	[more]
K3YZS7	1.4e-65	94.52	Histone domain-containing protein OS=Setaria italica OX=4555 PE=3 SV=1	[more]
A0A067J8V0	2.3e-65	95.86	Histone H3.2 OS=Jatropha curcas OX=180498 GN=JCGZ_07912 PE=3 SV=1	[more]
A0A287PH36	3.1e-65	97.18	Histone domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE...	[more]
K7U3E1	4.0e-65	96.58	Histone H3.2 OS=Zea mays OX=4577 GN=103638044 PE=3 SV=1	[more]

BLAST of CmUC09G164070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09200.1	6.5e-68	100.00	Histone superfamily protein	[more]
AT3G27360.1	6.5e-68	100.00	Histone superfamily protein	[more]
AT5G10390.1	6.5e-68	100.00	Histone superfamily protein	[more]
AT5G10400.1	6.5e-68	100.00	Histone superfamily protein	[more]
AT5G65360.1	6.5e-68	100.00	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 113..129 score: 96.93 coord: 95..113 score: 85.01 coord: 32..46 score: 92.32 coord: 18..32 score: 97.1 coord: 129..150 score: 94.86 coord: 49..70 score: 89.33 coord: 73..90 score: 97.46
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 49..151 e-value: 8.4E-74 score: 261.2
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 10..151
IPR000164	Histone H3/CENP-A	PROSITE	PS00959	HISTONE_H3_2	coord: 82..90
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 30..36
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 16..147 e-value: 1.5E-53 score: 180.6
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 17..151 e-value: 2.1E-75 score: 253.0
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 17..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	PANTHER	PTHR11426:SF198	SUBFAMILY NOT NAMED	coord: 10..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC09G164070.1	CmUC09G164070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity