CmUC09G162560 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G162560
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr09: 2350591 .. 2353607 (+)
RNA-Seq ExpressionCmUC09G162560
SyntenyCmUC09G162560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAACAAGTGAACAGAAAATGAAGTCGTGCCATCGTGGTTGGTTTCTCTCTCCTCGTAATGGCAACGCTCTCAAGCTTTCTCCACCGTTCTTCACAGTCCGTTACCGCCTCTTCAATCTCCGTTCCTCTCTGTTCAACCTTCTATGCTCCACCGGAAATCTCCTTCCCTTCGCATCGTCGTCGCCGCTTTTCACCTCTCTTGCTCTCCTTCGATTCTTGTGCTAAATCCGCCGTTTGCAGCGCAGCAGTACGACCGCCACCGGACTCCGATCCGCCTCCCGAGGAGGATCCGATTCGTCTAACAGGTTCCTATTCTTTGCTGATGTTATCTCCATTTAATTCGCTTAATTCACTGTATTGTTCGTGATAAGGCCTAAAAATTTTAGTGCATAGAGCGTGGTAGTGTGGTTGCTTATTTCTAGTTCGTTTTTTCACCGTCGGCGGAGAAGGCTACGTTATGTTGATCCCTATGGAATGACCTTCATAATCGAAAATGATAATTACTAGCTCCTGAATTTAGCTTGGCCCGTGCTAGTGGTGGTCTTCATTACTCGCTATAATTAGTAACAGTGTTATTTATCCATTTGAATTTCTGGTTGTTTAGAAGTTAAGTTGATCATTCATAAATATTATTCGTGTTCTTAGTCATCCGGAAATTTGCAAGGTCTTGGATGCATATGTGCTTAGCCATAATACTAGCTTCTTATGTTTTATTTTGGAAATTTGTTAATGATCAGTACGTTATAAATGTGTCGAAAATCATACCGGAAAATAAATAATGGCATTTGGAGCTTGTGCGATTCTGGTGCAAGTGCTACTACTCTTCGGACATTTTCATTAAGTGTACCAATTTCAGATGCCAATTATGAAGAGTAATTCGTAAACTATTGCTGAGTATTCATGTTAAGCTACAAGTAGAAAGCCATTTTCCGCTTCCATGACAGTTCTATCTTGTTTTCTTGTAAGAGCAATGGCTGTTTTCAGGATTCAACTTCGAGTGTAAGATGAAGGAAGCGTCATTTTTCTGCTGGAGATTTTTTGTCTTTAATGGTGTTGGATCGCAATTACAACCACATTTTCTAGTTGTTAAGCGTGGACAACATAATTTTTTCTTCTTTTCATTTTCTAGCAGTCTAGGAGATTGTGGTGATTTGAGATTGCATTGGTTTTCTACCTTAAATTGGTGCTCTTTCCAAACTTCTTTTTTGTGAATAGATCTTGAGTAGGACCAATTGGATTGTTTTCTGTAATGTTCTTGCAATTCTAAGACATTGCTTATCTTCATCTTTTCTGCTTATCTCTTAATAATGAATCATTTTAGGGTGTATATGTGATCTAAGTAGATTAGGTGATTGTTGATTGTTGGTTTAATAATAAAGAATCATTTTAGGGTGAATCTGTTGATCGAAGTGGATAAGGTGATTATTGACTGTTGGTTTAATAAAAAAGAATCGTTTCTTTCTCCTATAATGAAAAGAAAGTGAAGGAAGAGTCTTCCATAAGTTGGTATTTTCTTTAGAGAGAATCATTTTAGGGTGAATATGTCGATCAAACTTCATAGTAGATAAGATGATTGTTGTCCATTTCTTTAGTAAAAAAACAATCATTTCTTTCTGATTTAAATTGACAAAAATGGAGAGATAAGGGGAAGTGAAGGGAGAGCCTTTCATAAGTTGTCGTTTTTTTTTTTTTCAGATAGATCGTTTTAGCTTATGTTGATCAGAATAGACAAGGAGATTGTTAGACTGAAATAGTTGGTGATACTCAGGAATCCTACCAAGTTATTATATATTTTTAATGTTTGAACTTGATACTATTTTTCTTTCTTGATAATTCATCTTGTAACTTATTACATGTATTTGAATTGCTTTGGCACCAGGTTCCCTCACTTTTCTTAATATCATTATTTAATCAGGTTTTCCAGCAATTCTCTCAAAATTTCGGGACAGAGTACAAATTTTCCTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTAGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAAACAAGCATTCTTTTGTAAAGGATTGTAGGTTAATATAATAGTTTTAGGCTACTTGATTATATCTAAGATATACTTCAGCCTTTGACGAGGTAGATAAAGCTTGCTCCATCATGTTGATACCAAAGATGCAAGGATGTATACCCCCTGTATATTGTGTAGCTGCAAAGGAGACACTAAATGTTTATGAATCAAATGAAAGTAAAACTGTCATGAAAAGTTGTATTTTGTATTATATTCTTATCGAGTATGTTGAATTTCTTGATGGCCACCTACCTAGGATTTTATATTCGACGAATTTTCTTGACACTCGATATTGTAGGGTCAGACGTTATGTCTCATTAGATTAATCAAGGTGCGCACAAGTGTCTTGAACTTCATGAATCCCACCCCTCCGATTATGAATAACATAACCAGGGGAAATGTTCATTAGGAAAGTAGCAGAGTTAAATGGTTGAAGATATTCTATTGTAGCCTACTAACCTTGTTCTCTTTTCTGGACCAGTTTGTGTCATTCTTGCATTTATTTTACTGGATGTCTTAAGGGACAAATAACTAGTATTAAATTCAAATTTCTGCACATTGGTATTGGCTTTCCTTGACAGGAATTTGCTTGATGGATGTATAAGAACTGTCTACGCGAAACTTACAGCATTAGAATGATGGGAGGAATGATTGGTTCGTGCGATATTTAGAAGTGATTGCCACAATGTGTTCGACACGTTGCTAATAGTTCAATGTATGGCTGATAACTAAGTTTTTCTTGGTCATATTGTAATGTTCTAGGGTTGTGGAAAACTGAAAGTGAGAGTTGGTTGGGAGAAGAGAGAGAAGTGATCTCTAATTATTGGATTACTACAATCATACCAAAATGTTGTCTTCAATTAATTTTTTTTTTTCTATTTTTCTTTTAGTTTTAATATTAAAATGGGCAGCTCAACATCTCTCTAAAAAGCC

mRNA sequence

CTAACAAGTGAACAGAAAATGAAGTCGTGCCATCGTGGTTGGTTTCTCTCTCCTCGTAATGGCAACGCTCTCAAGCTTTCTCCACCGTTCTTCACAGTCCGTTACCGCCTCTTCAATCTCCGTTCCTCTCTGTTCAACCTTCTATGCTCCACCGGAAATCTCCTTCCCTTCGCATCGTCGTCGCCGCTTTTCACCTCTCTTGCTCTCCTTCGATTCTTGTGCTAAATCCGCCGTTTGCAGCGCAGCAGTACGACCGCCACCGGACTCCGATCCGCCTCCCGAGGAGGATCCGATTCGTCTAACAGCTACAAGTAGAAAGCCATTTTCCGCTTCCATGACAGTTCTATCTTGTTTTCTTGTAAGAGCAATGGCTGTTTTCAGGATTCAACTTCGAGTGAATTTGCTTGATGGATGTATAAGAACTGTCTACGCGAAACTTACAGCATTAGAATGATGGGAGGAATGATTGGTTCGTGCGATATTTAGAAGTGATTGCCACAATGTGTTCGACACGTTGCTAATAGTTCAATGTATGGCTGATAACTAAGTTTTTCTTGGTCATATTGTAATGTTCTAGGGTTGTGGAAAACTGAAAGTGAGAGTTGGTTGGGAGAAGAGAGAGAAGTGATCTCTAATTATTGGATTACTACAATCATACCAAAATGTTGTCTTCAATTAATTTTTTTTTTTCTATTTTTCTTTTAGTTTTAATATTAAAATGGGCAGCTCAACATCTCTCTAAAAAGCC

Coding sequence (CDS)

ATGGCAACGCTCTCAAGCTTTCTCCACCGTTCTTCACAGTCCGTTACCGCCTCTTCAATCTCCGTTCCTCTCTGTTCAACCTTCTATGCTCCACCGGAAATCTCCTTCCCTTCGCATCGTCGTCGCCGCTTTTCACCTCTCTTGCTCTCCTTCGATTCTTGTGCTAAATCCGCCGTTTGCAGCGCAGCAGTACGACCGCCACCGGACTCCGATCCGCCTCCCGAGGAGGATCCGATTCGTCTAACAGCTACAAGTAGAAAGCCATTTTCCGCTTCCATGACAGTTCTATCTTGTTTTCTTGTAAGAGCAATGGCTGTTTTCAGGATTCAACTTCGAGTGAATTTGCTTGATGGATGTATAAGAACTGTCTACGCGAAACTTACAGCATTAGAATGA

Protein sequence

MATLSSFLHRSSQSVTASSISVPLCSTFYAPPEISFPSHRRRRFSPLLLSFDSCAKSAVCSAAVRPPPDSDPPPEEDPIRLTATSRKPFSASMTVLSCFLVRAMAVFRIQLRVNLLDGCIRTVYAKLTALE
Homology
[Close]
BLAST of CmUC09G162560 vs. NCBI nr
Match: XP_038899182.1 (uncharacterized protein LOC120086544 [Benincasa hispida])

HSP 1 Score: 124.0 bits (310), Expect = 9.4e-25
Identity = 79/115 (68.70%), Postives = 85/115 (73.91%), Query Frame = 0 

Query: 1   MATLSSFLHRSSQSVTASSISVPLCSTFYAPPEISFPSHRRRRFSPLLLSFDSCAKSAVC 60
           MATLS  LHRSSQSVTASSI+VPLCSTF+A PEI F SH RRR SPLLLS DSC KSAVC
Sbjct: 1   MATLS--LHRSSQSVTASSIAVPLCSTFHARPEICFSSH-RRRLSPLLLSSDSCHKSAVC 60

Query: 61  SAAVRPPPDSDPPPEEDPIRLTATSRKPFSASMTVLSCFLVRAMAVFRIQLRVNL 116
           SAAVRPPPDSDPPPEEDPIRL     K F A   +LS F  R    F +   ++L
Sbjct: 61  SAAVRPPPDSDPPPEEDPIRL-----KGFPA---ILSKFRDRVQIFFAVLFWMSL 104

[Close]
BLAST of CmUC09G162560 vs. NCBI nr
Match: KAE8646440.1 (hypothetical protein Csa_015916 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 5.4e-20
Identity = 59/82 (71.95%), Postives = 66/82 (80.49%), Query Frame = 0 

Query: 1  MATLSSFLHRSSQSVTASSISVPLCSTFYAPPEISFPSHRRRRFSPLLLSFDSCAKSAVC 60
          MA LS+ LHRSSQSV ASSI++PLCSTF+   EI F  H RRR SPL  S +S A+S VC
Sbjct: 1  MAILSTSLHRSSQSVAASSIALPLCSTFHLRSEICFSLH-RRRLSPLFFSSNSYAESVVC 60

Query: 61 SAAVRPPPDSDPPPEEDPIRLT 83
          SAAVRPPPDSDPPPEEDP+RLT
Sbjct: 61 SAAVRPPPDSDPPPEEDPVRLT 81

[Close]
BLAST of CmUC09G162560 vs. NCBI nr
Match: XP_004135861.1 (uncharacterized protein LOC101209839 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 5.4e-20
Identity = 59/82 (71.95%), Postives = 66/82 (80.49%), Query Frame = 0 

Query: 1  MATLSSFLHRSSQSVTASSISVPLCSTFYAPPEISFPSHRRRRFSPLLLSFDSCAKSAVC 60
          MA LS+ LHRSSQSV ASSI++PLCSTF+   EI F  H RRR SPL  S +S A+S VC
Sbjct: 1  MAILSTSLHRSSQSVAASSIALPLCSTFHLRSEICFSLH-RRRLSPLFFSSNSYAESVVC 60

Query: 61 SAAVRPPPDSDPPPEEDPIRLT 83
          SAAVRPPPDSDPPPEEDP+RLT
Sbjct: 61 SAAVRPPPDSDPPPEEDPVRLT 81

[Close]
BLAST of CmUC09G162560 vs. NCBI nr
Match: XP_008461116.1 (PREDICTED: uncharacterized protein LOC103499798 [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-17
Identity = 55/78 (70.51%), Postives = 62/78 (79.49%), Query Frame = 0 

Query: 5  SSFLHRSSQSVTASSISVPLCSTFYAPPEISFPSHRRRRFSPLLLSFDSCAKSAVCSAAV 64
          S+ LHRSS SV ASSI++PLCSTF+   +I F S  RRR SPL  S +S AKS VCSAAV
Sbjct: 3  STSLHRSSHSVAASSIALPLCSTFHFRSKICF-SPPRRRLSPLFFSSNSYAKSVVCSAAV 62

Query: 65 RPPPDSDPPPEEDPIRLT 83
          RPPPDSDPPPEEDP+RLT
Sbjct: 63 RPPPDSDPPPEEDPVRLT 79

[Close]
BLAST of CmUC09G162560 vs. NCBI nr
Match: XP_023004359.1 (uncharacterized protein LOC111497700 isoform X2 [Cucurbita maxima])

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-17
Identity = 60/98 (61.22%), Postives = 74/98 (75.51%), Query Frame = 0 

Query: 5   SSFLHRSSQSVTASSISVPLCSTFYAPPEISF-PSHRRRRFSPLLLSFDSCAKSAVCSAA 64
           S+ L+  S++VTA +I++PL S+F+A PEISF P H RR  S LLLSF+ CAKSAVC+AA
Sbjct: 9   SNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRR--SSLLLSFNPCAKSAVCTAA 68

Query: 65  VRPPPDSDPPPEEDPIRLTATSRKPFSASMTVLSCFLV 102
           VRPPPDSDPPP+EDPIRL     K  S+S  V+S F V
Sbjct: 69  VRPPPDSDPPPDEDPIRLKGLC-KCTSSSYCVMSIFFV 103

[Close]
BLAST of CmUC09G162560 vs. ExPASy TrEMBL
Match: A0A0A0K8T0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.6e-20
Identity = 59/82 (71.95%), Postives = 66/82 (80.49%), Query Frame = 0 

Query: 1  MATLSSFLHRSSQSVTASSISVPLCSTFYAPPEISFPSHRRRRFSPLLLSFDSCAKSAVC 60
          MA LS+ LHRSSQSV ASSI++PLCSTF+   EI F  H RRR SPL  S +S A+S VC
Sbjct: 1  MAILSTSLHRSSQSVAASSIALPLCSTFHLRSEICFSLH-RRRLSPLFFSSNSYAESVVC 60

Query: 61 SAAVRPPPDSDPPPEEDPIRLT 83
          SAAVRPPPDSDPPPEEDP+RLT
Sbjct: 61 SAAVRPPPDSDPPPEEDPVRLT 81

[Close]
BLAST of CmUC09G162560 vs. ExPASy TrEMBL
Match: A0A1S3CE06 (uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.4e-18
Identity = 55/78 (70.51%), Postives = 62/78 (79.49%), Query Frame = 0 

Query: 5  SSFLHRSSQSVTASSISVPLCSTFYAPPEISFPSHRRRRFSPLLLSFDSCAKSAVCSAAV 64
          S+ LHRSS SV ASSI++PLCSTF+   +I F S  RRR SPL  S +S AKS VCSAAV
Sbjct: 3  STSLHRSSHSVAASSIALPLCSTFHFRSKICF-SPPRRRLSPLFFSSNSYAKSVVCSAAV 62

Query: 65 RPPPDSDPPPEEDPIRLT 83
          RPPPDSDPPPEEDP+RLT
Sbjct: 63 RPPPDSDPPPEEDPVRLT 79

[Close]
BLAST of CmUC09G162560 vs. ExPASy TrEMBL
Match: A0A6J1KW20 (uncharacterized protein LOC111497700 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497700 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 7.1e-18
Identity = 60/98 (61.22%), Postives = 74/98 (75.51%), Query Frame = 0 

Query: 5   SSFLHRSSQSVTASSISVPLCSTFYAPPEISF-PSHRRRRFSPLLLSFDSCAKSAVCSAA 64
           S+ L+  S++VTA +I++PL S+F+A PEISF P H RR  S LLLSF+ CAKSAVC+AA
Sbjct: 9   SNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRR--SSLLLSFNPCAKSAVCTAA 68

Query: 65  VRPPPDSDPPPEEDPIRLTATSRKPFSASMTVLSCFLV 102
           VRPPPDSDPPP+EDPIRL     K  S+S  V+S F V
Sbjct: 69  VRPPPDSDPPPDEDPIRLKGLC-KCTSSSYCVMSIFFV 103

[Close]
BLAST of CmUC09G162560 vs. ExPASy TrEMBL
Match: A0A5A7UYV9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002020 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.7e-17
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 0 

Query: 5  SSFLHRSSQSVTASSISVPLCSTFYAPPEISFPSHRRRRFSPLLLSFDSCAKSAVCSAAV 64
          S+ LHRSS SV A SI++PLCSTF+   +I F S  RRR SPL  S +S AKS VCSAAV
Sbjct: 3  STSLHRSSHSVAAFSIALPLCSTFHFRSKICF-SPPRRRLSPLFFSSNSYAKSVVCSAAV 62

Query: 65 RPPPDSDPPPEEDPIRLT 83
          RPPPDSDPPPEEDP+RLT
Sbjct: 63 RPPPDSDPPPEEDPVRLT 79

[Close]
BLAST of CmUC09G162560 vs. ExPASy TrEMBL
Match: A0A6J1KZ93 (uncharacterized protein LOC111497700 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497700 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.6e-17
Identity = 53/78 (67.95%), Postives = 65/78 (83.33%), Query Frame = 0 

Query: 5  SSFLHRSSQSVTASSISVPLCSTFYAPPEISF-PSHRRRRFSPLLLSFDSCAKSAVCSAA 64
          S+ L+  S++VTA +I++PL S+F+A PEISF P H RR  S LLLSF+ CAKSAVC+AA
Sbjct: 9  SNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRR--SSLLLSFNPCAKSAVCTAA 68

Query: 65 VRPPPDSDPPPEEDPIRL 82
          VRPPPDSDPPP+EDPIRL
Sbjct: 69 VRPPPDSDPPPDEDPIRL 84

The following BLAST results are available for this feature:
BLAST of CmUC09G162560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899182.19.4e-2568.70uncharacterized protein LOC120086544 [Benincasa hispida][more]
KAE8646440.15.4e-2071.95hypothetical protein Csa_015916 [Cucumis sativus][more]
XP_004135861.15.4e-2071.95uncharacterized protein LOC101209839 [Cucumis sativus][more]
XP_008461116.11.1e-1770.51PREDICTED: uncharacterized protein LOC103499798 [Cucumis melo][more]
XP_023004359.11.5e-1761.22uncharacterized protein LOC111497700 isoform X2 [Cucurbita maxima][more]
BLAST of CmUC09G162560 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC09G162560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8T02.6e-2071.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1[more]
A0A1S3CE065.4e-1870.51uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=... [more]
A0A6J1KW207.1e-1861.22uncharacterized protein LOC111497700 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A5A7UYV92.7e-1769.23Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1KZ934.6e-1767.95uncharacterized protein LOC111497700 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of CmUC09G162560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G162560.1CmUC09G162560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane