CmUC09G162460 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G162460
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionDUF761 domain-containing protein
LocationCmU531Chr09: 2279590 .. 2279841 (+)
RNA-Seq ExpressionCmUC09G162460
SyntenyCmUC09G162460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGAGCTCCGAACCACCTGTTCCTGCCGCCGGTAAGAGTAAGCAGCAGCCACCGCCGTCTCCGTCGTCCCCTCGCCGGCGCTTCGGCGGAGAGAGGAGGAAATTGGAGAGGACAGTGACGGTGACGGTGACGGAAGACGTTGATGAAAGTGCTGAAGCTTTCATTAAGAAGTTCAGAAATCAATTGTTGATTCAGAGGCTTCAATCCATTGAAAATTATGAGAAAATGCTGGCTGGAGAAACTTGA

mRNA sequence

ATGAAGAAGAGCTCCGAACCACCTGTTCCTGCCGCCGGTAAGAGTAAGCAGCAGCCACCGCCGTCTCCGTCGTCCCCTCGCCGGCGCTTCGGCGGAGAGAGGAGGAAATTGGAGAGGACAGTGACGGTGACGGTGACGGAAGACGTTGATGAAAGTGCTGAAGCTTTCATTAAGAAGTTCAGAAATCAATTGTTGATTCAGAGGCTTCAATCCATTGAAAATTATGAGAAAATGCTGGCTGGAGAAACTTGA

Coding sequence (CDS)

ATGAAGAAGAGCTCCGAACCACCTGTTCCTGCCGCCGGTAAGAGTAAGCAGCAGCCACCGCCGTCTCCGTCGTCCCCTCGCCGGCGCTTCGGCGGAGAGAGGAGGAAATTGGAGAGGACAGTGACGGTGACGGTGACGGAAGACGTTGATGAAAGTGCTGAAGCTTTCATTAAGAAGTTCAGAAATCAATTGTTGATTCAGAGGCTTCAATCCATTGAAAATTATGAGAAAATGCTGGCTGGAGAAACTTGA

Protein sequence

MKKSSEPPVPAAGKSKQQPPPSPSSPRRRFGGERRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEKMLAGET
Homology
BLAST of CmUC09G162460 vs. NCBI nr
Match: KAA0058765.1 (DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-24
Identity = 71/86 (82.56%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1  MKKSSEPP---VPAAGKSKQQPPPSPSSPRRRFGGERRKLERTVTVTVTEDVDESAEAFI 60
          MKKSSE P     A G +K QPPPSPSSP R  GGERRKLERTVTVTVTEDVDESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYEKMLAGET 84
          KKFRNQLLIQRLQSIENYE++LAGET
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

BLAST of CmUC09G162460 vs. NCBI nr
Match: KGN45285.1 (hypothetical protein Csa_016012 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 2.0e-20
Identity = 66/85 (77.65%), Postives = 71/85 (83.53%), Query Frame = 0

Query: 1   MKKSSEPPV--PAAGKSKQQPPPSPSSPRRRFGGERRKLERTVTVTVTEDVDESAEAFIK 60
           MKK+SE P    A G +K QPPP PSSP R  GGERRKLER  TVTVTEDV+ESAEAFI+
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLER--TVTVTEDVNESAEAFIQ 78

Query: 61  KFRNQLLIQRLQSIENYEKMLAGET 84
           KFRNQLLIQRLQSIENYEK+LAGET
Sbjct: 79  KFRNQLLIQRLQSIENYEKILAGET 101

BLAST of CmUC09G162460 vs. NCBI nr
Match: KAG6575588.1 (hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014129.1 hypothetical protein SDJN02_24302, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 60/89 (67.42%), Postives = 69/89 (77.53%), Query Frame = 0

Query: 1  MKKSSEPP----VPAAGKSKQQPPPSPSSPRRRFGGERRKLER--TVTVTVTEDVDESAE 60
          MK +S+PP      AAG  KQQ PP P  PR+    ER K+E+  TVTV+VTEDV+ESAE
Sbjct: 1  MKNTSQPPFSAAAAAAGSCKQQQPPPP--PRQ----ERTKMEKTPTVTVSVTEDVNESAE 60

Query: 61 AFIKKFRNQLLIQRLQSIENYEKMLAGET 84
          AFIK+FRNQLLIQRLQSIENYEK+LAGET
Sbjct: 61 AFIKRFRNQLLIQRLQSIENYEKILAGET 83

BLAST of CmUC09G162460 vs. NCBI nr
Match: TQD96953.1 (hypothetical protein C1H46_017433 [Malus baccata])

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0

Query: 35 RKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEKMLA 81
          +KLER      TED++ESAEAFIKKFR QLLIQRL+SIENYE+MLA
Sbjct: 51 KKLER----KSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLA 92

BLAST of CmUC09G162460 vs. NCBI nr
Match: XP_021806017.1 (uncharacterized protein LOC110750062 [Prunus avium])

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-06
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0

Query: 34 RRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEKMLA 81
          + KLER      TED++ESAEAFIKKFR QLLIQRL+SIENYE+MLA
Sbjct: 48 KNKLER----KSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLA 90

BLAST of CmUC09G162460 vs. ExPASy TrEMBL
Match: A0A5D3CK25 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002120 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.5e-25
Identity = 71/86 (82.56%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1  MKKSSEPP---VPAAGKSKQQPPPSPSSPRRRFGGERRKLERTVTVTVTEDVDESAEAFI 60
          MKKSSE P     A G +K QPPPSPSSP R  GGERRKLERTVTVTVTEDVDESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYEKMLAGET 84
          KKFRNQLLIQRLQSIENYE++LAGET
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

BLAST of CmUC09G162460 vs. ExPASy TrEMBL
Match: A0A0A0K6D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.6e-21
Identity = 66/85 (77.65%), Postives = 71/85 (83.53%), Query Frame = 0

Query: 1   MKKSSEPPV--PAAGKSKQQPPPSPSSPRRRFGGERRKLERTVTVTVTEDVDESAEAFIK 60
           MKK+SE P    A G +K QPPP PSSP R  GGERRKLER  TVTVTEDV+ESAEAFI+
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLER--TVTVTEDVNESAEAFIQ 78

Query: 61  KFRNQLLIQRLQSIENYEKMLAGET 84
           KFRNQLLIQRLQSIENYEK+LAGET
Sbjct: 79  KFRNQLLIQRLQSIENYEKILAGET 101

BLAST of CmUC09G162460 vs. ExPASy TrEMBL
Match: A0A540MDY4 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_017433 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.9e-07
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0

Query: 35 RKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEKMLA 81
          +KLER      TED++ESAEAFIKKFR QLLIQRL+SIENYE+MLA
Sbjct: 51 KKLER----KSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLA 92

BLAST of CmUC09G162460 vs. ExPASy TrEMBL
Match: M5WWR7 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G082000 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0

Query: 34 RRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEKMLA 81
          + KLER      TED++ESAEAFIKKFR QLLIQRL+SIENYE+MLA
Sbjct: 49 KNKLER----KSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLA 91

BLAST of CmUC09G162460 vs. ExPASy TrEMBL
Match: A0A314V316 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_33869 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0

Query: 34 RRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYEKMLA 81
          + KLER      TED++ESAEAFIKKFR QLLIQRL+SIENYE+MLA
Sbjct: 48 KNKLER----KSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLA 90

BLAST of CmUC09G162460 vs. TAIR 10
Match: AT1G15385.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 35 RKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIEN 75
          +K+ER  ++    DVD+SAEAFI KFRNQLL+QRL+SIEN
Sbjct: 32 KKVERKASM----DVDKSAEAFITKFRNQLLLQRLESIEN 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0058765.11.3e-2482.56DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 d... [more]
KGN45285.12.0e-2077.65hypothetical protein Csa_016012 [Cucumis sativus][more]
KAG6575588.11.1e-1567.42hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sorori... [more]
TQD96953.11.6e-0673.91hypothetical protein C1H46_017433 [Malus baccata][more]
XP_021806017.12.1e-0672.34uncharacterized protein LOC110750062 [Prunus avium][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CK256.5e-2582.56DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A0A0K6D19.6e-2177.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1[more]
A0A540MDY47.9e-0773.91Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_017433 PE=4 SV=1[more]
M5WWR71.0e-0672.34Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G082000 PE=4 SV=1[more]
A0A314V3161.0e-0672.34Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_338... [more]
Match NameE-valueIdentityDescription
AT1G15385.11.3e-0665.00unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761,... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 47..80
e-value: 9.1E-16
score: 57.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availablePANTHERPTHR33098:SF82DUF761 DOMAIN PROTEINcoord: 12..82
NoneNo IPR availablePANTHERPTHR33098COTTON FIBER (DUF761)coord: 12..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G162460.1CmUC09G162460.1mRNA