CmUC09G162310 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC09G162310
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	(6-4)DNA photolyase
Location	CmU531Chr09: 2184231 .. 2187297 (+)
RNA-Seq Expression	CmUC09G162310
Synteny	CmUC09G162310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCTAATCCCACTGCGTTTTCACCGGGATCGTCTAGGGCTGGACTTCTTCTTCAGAGTCTTGTGGACGATTTGAACCTCAAGAAGCTCGGCTCGTGCTTGTTGCTTCTCCACGGGGAGCCTAGCGAGGTCTTCATTCCCTGCTTGGAAGAGGTATCTATAAGTAACCTCTTACTTCGCCTTAAAGGATATTGCTATAGTAGCTGTTAATTCAACTTCCGCTTACGGTTATTAACTTATCATCTGTGGTCTTGTTCGCTTATTTCTAGTGGAATGTCCACAAGTTCTGCTTTGAGTATGATACAGAACCCTCCTTACTATCAAGTTTAAAGTTAGGCGATTCTTTTGTCAATATTGAGTTAAGAGATGCAAGAGTGACCAGGTACTCGTAGTTCTGGGCAGAGCGAAAGAAGGAAGAAATTTCTACTGCTTAGTTCGTCGCAAATCTGAAAAAGTGTCTATGAAATACTTAAGATCTTATGGTTTTTTCCTCCAAATTTTTCTCATAGAACCTTGAGAATTGAGATCATATTTTCAAGAAATTAGAGTGTTAATTTCCACTATACTAGAAAAATTAGAATGCCAACTTTAGCAGCTTGCTAAAACAATTTCTGGTTATGATCTGCTTGTATTCTCAGAAAAGGAAATGGAAATTTAGGGCTGTTTGATAATGTTTTTGTTTTTTGTTTCCCGTTTTTTGTTTTTTGTTTTTTGTTTCTTATTTATTATTTCTTGTTTATTGTTTCTTGTTTCTTAAGAACTAAAAACATGAATATGTTTGACATATAAATATAGCAATTTTTAAAAAAATAAAATTTACAAAGAAAACAAATAAATAAATATGAAAGAAATATAAAAACAAACAAAATAAACTTACCTCGAAATCAAACTAGTGATCTGCAAGCAGCAGGATTTGCTTGGCGTGCTGACCTACCAATGGAGCAAAGTTACTTCTTGGTTCATAAAGTGAAATAGTATTTAGAAATAAGAAACAGGAACAGTTACCAAACAAGTATGTTTCTTGAAAAATGAGAAACAATAACAGGAAGCAGAAAACGGGAATGTCATCAAACGGCCTCTTATTGGTCACTTTTGTGTCCATCTGTTTTCTCACAGAACCATGCATCTGCAGTTGGGATTGAAGTCTTCTCTCCTATGAGCCATACTCTATTTTAACCGGCAGACATTAGTCAAAAGGTTGTTTTGAAAGGTCTCTATTATATTGGGACATAAACACTGTTCTAGTGTGGAATTTATTGCTTAATCAGTTGGTATGTTTCCATTTTTCTCATGATGGTTAATTTGGAATGAGAATTAGTTTTGTGCATGATTAATGGTCTCCTTTTAGAGGAGATAAAACGGAAGTTTTGAAGAGGCTGGAATAGTCATTGAGTAACAAGGTACAGATTCTTTTTCTAGAATTCTTTCAGGTTCTAAGCTTCTATCTCCGAGGATCCATCTTTTTTCTCATCTTTCATCATGATCGATTTTCTGTTCTATGTTGCCGGTATGAACATCAACTTTTGATGCAGATATGCCCAAGCAGTACACATATATGAGCCATGGACAGCTCCTCTCAGCATGCAAAAGAAAGCAAAGGGCATCATCACTGGTAAACATTACCCAAAGCCAGGTTAGTTCTGCTGACGGTTATTTAGGTTAATTATTATTTATGCCTCCTGACCAGAAGCTTTATATATTATACCTTTTAAAGAGAAAATGGCTAACAATATTTGGAAGGGGGAAAAATTGTAACTGGGTGTGGCCATTGGTAGTTGTTAGAACATCTCCTTAAATCATCCAAAATGAAATCATTAGTTGTCTATTCCTCTACTCTGGTTACTATATCAACTGTTTCCATCTACTCTCAGGACATTTTCTCTTCATTTCCTTGTATTTAGTTGATCTTATAATACCTATAATGACAAACCTATTAAACCCTGCAAGCAAGTTGACTTTTGACAACTTCTTGCAAGATCACACTTCTCAAAACAATCTTTTATCAAATTGGTCTTGTCAAGAGATGTACGTAGTCTTATATGAATGAGTTCGGAGAGGCATAAAGTAAGTATGGAAGTTGGGTTCTCAAGAAAGCGAGTGAAACATTTGTCGAAGCTGTTCATGAGAGCATTTCCTTTTCTTATCTTTTAGGAGACAGATAAAATGAGAAATTTTTATAACTGTAAGGATACTCCCTTACTTTGTGATATATTAAACTTGATAATGAGTAAATACAGGGGATTTGCTTAACAAAACAACAAGAACAAGAACAAAGATAAACCTTCAGCCAAACACAGGAGACTCTCCCTTCCCAGAACTATTGTTCAATACACAAAATTCAAGATAACTAACCCTAGCGAAATAAAACACTTAAATACTGACATTCCCCTGTTGCACGATCTTCTGGGACCACAGCCAGCTATTTGCTTGTCTAGGGTGCAATTCCTTTCCTATCCTTTCTCATATATACCTGCTTAATTGGAGGCCTAGCAATAACACAGTTCAAATTTTGCTGTATCCTCCTGGAGGTAAGGATTCAATTGCTATTATTTGATCTCATCAACTCAATTACTCAGGTCTACCATCTTTCTTTTTCAGTGGTATCCCATGATATAGCTACTGAAGAACGTAGAAGTTAAGTGGCTGAAGCATACGGACTAAACAAAAGAATGAATGATTTGATAAGCAAATAAGATTTGGAGAACTTGAAATGAAGTTCAGAAGAGGAACAGAGCCAAAGGTTCAAAGGAAACAGAAAAGACAAACACTCATTAACTCGGTTCGGCTGCCCTAGTGTTTCTTTTCTGCTAACTCCCTGTTGCAGGAAGCTACAGGTGTTTAGATGTTAAAGATCCAGCTCCATCTACTTCAATTCTTCAACTCCCAGGTTGCGGGAAGTTGCACGAATACACCATTCAATTAAGCCATCTGATCTCTTTGATAGTTCGTAGGCATTCTTTATGCAAGCCCTGTTGTTGAACTCTCGAAACTGGTTGATGTTTCTCAGAATTCAGTTCCAAAATGCACTTGTCTAACTCTTCTTTCTGCTGCAACTAGCCAATAG

mRNA sequence

ATGGAGCCTAATCCCACTGCGTTTTCACCGGGATCGTCTAGGGCTGGACTTCTTCTTCAGAGTCTTGTGGACGATTTGAACCTCAAGAAGCTCGGCTCGTGCTTGTTGCTTCTCCACGGGGAGCCTAGCGAGGTCTTCATTCCCTGCTTGGAAGAGTGGAATGTCCACAAGTTCTGCTTTGAGTATGATACAGAACCCTCCTTACTATCAAGTTTAAAGTTAGGCGATTCTTTTGTCAATATTGAGTTAAGAGATGCAAGAGTGACCAGATATGCCCAAGCAGTACACATATATGAGCCATGGACAGCTCCTCTCAGCATGCAAAAGAAAGCAAAGGGCATCATCACTGGTAAACATTACCCAAAGCCAGTGGTATCCCATGATATAGCTACTGAAGAACGAAGCTACAGGTGTTTAGATGTTAAAGATCCAGCTCCATCTACTTCAATTCTTCAACTCCCAGGCATTCTTTATGCAAGCCCTGTTGTTGAACTCTCGAAACTGGTTGATGTTTCTCAGAATTCAGTTCCAAAATGCACTTGTCTAACTCTTCTTTCTGCTGCAACTAGCCAATAG

Coding sequence (CDS)

ATGGAGCCTAATCCCACTGCGTTTTCACCGGGATCGTCTAGGGCTGGACTTCTTCTTCAGAGTCTTGTGGACGATTTGAACCTCAAGAAGCTCGGCTCGTGCTTGTTGCTTCTCCACGGGGAGCCTAGCGAGGTCTTCATTCCCTGCTTGGAAGAGTGGAATGTCCACAAGTTCTGCTTTGAGTATGATACAGAACCCTCCTTACTATCAAGTTTAAAGTTAGGCGATTCTTTTGTCAATATTGAGTTAAGAGATGCAAGAGTGACCAGATATGCCCAAGCAGTACACATATATGAGCCATGGACAGCTCCTCTCAGCATGCAAAAGAAAGCAAAGGGCATCATCACTGGTAAACATTACCCAAAGCCAGTGGTATCCCATGATATAGCTACTGAAGAACGAAGCTACAGGTGTTTAGATGTTAAAGATCCAGCTCCATCTACTTCAATTCTTCAACTCCCAGGCATTCTTTATGCAAGCCCTGTTGTTGAACTCTCGAAACTGGTTGATGTTTCTCAGAATTCAGTTCCAAAATGCACTTGTCTAACTCTTCTTTCTGCTGCAACTAGCCAATAG

Protein sequence

MEPNPTAFSPGSSRAGLLLQSLVDDLNLKKLGSCLLLLHGEPSEVFIPCLEEWNVHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQAVHIYEPWTAPLSMQKKAKGIITGKHYPKPVVSHDIATEERSYRCLDVKDPAPSTSILQLPGILYASPVVELSKLVDVSQNSVPKCTCLTLLSAATSQ

Homology

[Close]

BLAST of CmUC09G162310 vs. NCBI nr
Match: KAA0058779.1 ((6-4)DNA photolyase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 9.2e-21
Identity = 75/167 (44.91%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEPWTAPLSMQKKAK 120
           V K CFEYDT+P               +  DARV   A A  + ++ P +  L       
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDARVQNLASAAGIEVFSPVSHTLF---NPA 181

Query: 121 GIITGKHYPKPVVSHDIATE---ERSYRCLDVKDPAPSTSILQLPGI 157
            II  K+   P +S+    +   E S+ C  +     ST++  LP +
Sbjct: 182 DIIQKKNGGSPPLSYQSFLKLAGEPSWACAPL-----STTVSSLPPV 207

[Close]

BLAST of CmUC09G162310 vs. NCBI nr
Match: XP_038896172.1 ((6-4)DNA photolyase [Benincasa hispida])

HSP 1 Score: 109.4 bits (272), Expect = 3.5e-20
Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLILHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEP 67
           V+K CFEYDT+P
Sbjct: 122 VNKLCFEYDTDP 133

[Close]

BLAST of CmUC09G162310 vs. NCBI nr
Match: XP_022959592.1 ((6-4)DNA photolyase [Cucurbita moschata] >KAG7025764.1 (6-4)DNA photolyase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 109.0 bits (271), Expect = 4.6e-20
Identity = 61/108 (56.48%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           M+PNP+AFSPGSSRAGL     LL+SLVD D+NLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MKPNPSAFSPGSSRAGLNRIQFLLESLVDLDMNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEP 101
           V K CFEYDT+P               +  D+RV  +A A  V ++ P
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDSRVQNHASAAGVEVFSP 156

[Close]

BLAST of CmUC09G162310 vs. NCBI nr
Match: TYK10573.1 ((6-4)DNA photolyase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 108.2 bits (269), Expect = 7.8e-20
Identity = 55/72 (76.39%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEP 67
           V K CFEYDT+P
Sbjct: 122 VKKLCFEYDTDP 133

[Close]

BLAST of CmUC09G162310 vs. NCBI nr
Match: XP_008461072.1 (PREDICTED: (6-4)DNA photolyase isoform X1 [Cucumis melo])

HSP 1 Score: 108.2 bits (269), Expect = 7.8e-20
Identity = 55/72 (76.39%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEP 67
           V K CFEYDT+P
Sbjct: 122 VKKLCFEYDTDP 133

[Close]

BLAST of CmUC09G162310 vs. ExPASy Swiss-Prot
Match: O48652 ((6-4)DNA photolyase OS=Arabidopsis thaliana OX=3702 GN=UVR3 PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           ME +P+AFSPGSSRAG+     LL+SL D D +LKKLGS LL+  GEP EV + CL+EW 
Sbjct: 63  MESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWK 122

Query: 61  VHKFCFEYDTEP 67
           V + CFEYDT+P
Sbjct: 123 VKRLCFEYDTDP 134

[Close]

BLAST of CmUC09G162310 vs. ExPASy Swiss-Prot
Match: Q0E2Y1 ((6-4)DNA photolyase OS=Oryza sativa subsp. japonica OX=39947 GN=UVR3 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLH----GEPSEVFIPCL 60
           + P+  A SPGS+RAG+     LL+SL D D  L++LGS LLLL     G+ +      L
Sbjct: 54  LRPDQAAPSPGSARAGVARVRFLLESLSDLDARLRRLGSRLLLLRARDDGDVAGTVCAAL 113

Query: 61  EEWNVHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEP 101
           ++WN+ K CFE DTEP  L+             RD +V  +A A  + ++ P
Sbjct: 114 KDWNIGKLCFESDTEPYALA-------------RDKKVMDFAAASGIDVFSP 152

[Close]

BLAST of CmUC09G162310 vs. ExPASy Swiss-Prot
Match: Q70AD6 (Cryptochrome-1 OS=Spalax judaei OX=134510 GN=CRY1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-07
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 11  GSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWNVHKFCFEYDT 67
           GSS  G+     LLQ L D D NL+KL S LL++ G+P++VF    +EWN+ K   EYD+
Sbjct: 43  GSSNVGINRWRFLLQCLEDLDANLRKLNSRLLVIRGQPADVFPRLFKEWNITKLSIEYDS 102

[Close]

BLAST of CmUC09G162310 vs. ExPASy Swiss-Prot
Match: Q5IZC5 (Cryptochrome-1 OS=Erithacus rubecula OX=37610 GN=CRY1 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 7.9e-07
Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 11  GSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWNVHKFCFEYDT 67
           GSS  G+     LLQ L D D NL+KL S L ++ G+P++VF    +EWN+ K   EYD+
Sbjct: 43  GSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNIAKLSIEYDS 102

[Close]

BLAST of CmUC09G162310 vs. ExPASy Swiss-Prot
Match: Q16526 (Cryptochrome-1 OS=Homo sapiens OX=9606 GN=CRY1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.9e-07
Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 11  GSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWNVHKFCFEYDT 67
           GSS  G+     LLQ L D D NL+KL S L ++ G+P++VF    +EWN+ K   EYD+
Sbjct: 43  GSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDS 102

[Close]

BLAST of CmUC09G162310 vs. ExPASy TrEMBL
Match: A0A5A7UZ31 ((6-4)DNA photolyase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002530 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.5e-21
Identity = 75/167 (44.91%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEPWTAPLSMQKKAK 120
           V K CFEYDT+P               +  DARV   A A  + ++ P +  L       
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDARVQNLASAAGIEVFSPVSHTLF---NPA 181

Query: 121 GIITGKHYPKPVVSHDIATE---ERSYRCLDVKDPAPSTSILQLPGI 157
            II  K+   P +S+    +   E S+ C  +     ST++  LP +
Sbjct: 182 DIIQKKNGGSPPLSYQSFLKLAGEPSWACAPL-----STTVSSLPPV 207

[Close]

BLAST of CmUC09G162310 vs. ExPASy TrEMBL
Match: A0A6J1H4Z1 ((6-4)DNA photolyase OS=Cucurbita moschata OX=3662 GN=LOC111460621 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.2e-20
Identity = 61/108 (56.48%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           M+PNP+AFSPGSSRAGL     LL+SLVD D+NLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MKPNPSAFSPGSSRAGLNRIQFLLESLVDLDMNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEP 101
           V K CFEYDT+P               +  D+RV  +A A  V ++ P
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDSRVQNHASAAGVEVFSP 156

[Close]

BLAST of CmUC09G162310 vs. ExPASy TrEMBL
Match: A0A5D3CFB1 ((6-4)DNA photolyase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002270 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.8e-20
Identity = 55/72 (76.39%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEP 67
           V K CFEYDT+P
Sbjct: 122 VKKLCFEYDTDP 133

[Close]

BLAST of CmUC09G162310 vs. ExPASy TrEMBL
Match: A0A1S3CDW6 ((6-4)DNA photolyase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499773 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.8e-20
Identity = 55/72 (76.39%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEP 67
           V K CFEYDT+P
Sbjct: 122 VKKLCFEYDTDP 133

[Close]

BLAST of CmUC09G162310 vs. ExPASy TrEMBL
Match: A0A6J1KRI5 ((6-4)DNA photolyase OS=Cucurbita maxima OX=3661 GN=LOC111498021 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 8.4e-20
Identity = 60/108 (55.56%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           M+P+P+AFSPGSSRAGL     LL+SLVD D+NLKKLGS LL+LHGEP EV I CLEEWN
Sbjct: 62  MKPDPSAFSPGSSRAGLNRIQFLLESLVDLDMNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEP 101
           V K CFEYDT+P               +  D+RV  +A A  V ++ P
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDSRVQNHASAAGVEVFSP 156

[Close]

BLAST of CmUC09G162310 vs. TAIR 10
Match: AT3G15620.1 (DNA photolyase family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           ME +P+AFSPGSSRAG+     LL+SL D D +LKKLGS LL+  GEP EV + CL+EW 
Sbjct: 63  MESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWK 122

Query: 61  VHKFCFEYDTEP 67
           V + CFEYDT+P
Sbjct: 123 VKRLCFEYDTDP 134

[Close]

BLAST of CmUC09G162310 vs. TAIR 10
Match: AT3G15620.2 (DNA photolyase family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPSEVFIPCLEEWN 60
           ME +P+AFSPGSSRAG+     LL+SL D D +LKKLGS LL+  GEP EV + CL+EW 
Sbjct: 63  MESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWK 122

Query: 61  VHKFCFEYDTEP 67
           V + CFEYDT+P
Sbjct: 123 VKRLCFEYDTDP 134

The following BLAST results are available for this feature:

BLAST of CmUC09G162310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058779.1	9.2e-21	44.91	(6-4)DNA photolyase isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038896172.1	3.5e-20	76.39	(6-4)DNA photolyase [Benincasa hispida]	[more]
XP_022959592.1	4.6e-20	56.48	(6-4)DNA photolyase [Cucurbita moschata] >KAG7025764.1 (6-4)DNA photolyase, part...	[more]
TYK10573.1	7.8e-20	76.39	(6-4)DNA photolyase isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008461072.1	7.8e-20	76.39	PREDICTED: (6-4)DNA photolyase isoform X1 [Cucumis melo]	[more]

BLAST of CmUC09G162310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48652	1.9e-16	61.11	(6-4)DNA photolyase OS=Arabidopsis thaliana OX=3702 GN=UVR3 PE=1 SV=2	[more]
Q0E2Y1	1.4e-08	37.50	(6-4)DNA photolyase OS=Oryza sativa subsp. japonica OX=39947 GN=UVR3 PE=3 SV=1	[more]
Q70AD6	2.7e-07	48.39	Cryptochrome-1 OS=Spalax judaei OX=134510 GN=CRY1 PE=2 SV=1	[more]
Q5IZC5	7.9e-07	46.77	Cryptochrome-1 OS=Erithacus rubecula OX=37610 GN=CRY1 PE=2 SV=2	[more]
Q16526	7.9e-07	46.77	Cryptochrome-1 OS=Homo sapiens OX=9606 GN=CRY1 PE=1 SV=1	[more]

BLAST of CmUC09G162310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZ31	4.5e-21	44.91	(6-4)DNA photolyase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1H4Z1	2.2e-20	56.48	(6-4)DNA photolyase OS=Cucurbita moschata OX=3662 GN=LOC111460621 PE=3 SV=1	[more]
A0A5D3CFB1	3.8e-20	76.39	(6-4)DNA photolyase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CDW6	3.8e-20	76.39	(6-4)DNA photolyase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499773 PE=3 SV=1	[more]
A0A6J1KRI5	8.4e-20	55.56	(6-4)DNA photolyase OS=Cucurbita maxima OX=3661 GN=LOC111498021 PE=3 SV=1	[more]

BLAST of CmUC09G162310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15620.1	1.3e-17	61.11	DNA photolyase family protein	[more]
AT3G15620.2	1.3e-17	61.11	DNA photolyase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 1..73 e-value: 3.4E-7 score: 32.2
None	No IPR available	GENE3D	1.10.579.10	DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3	coord: 84..151 e-value: 1.6E-7 score: 32.7
None	No IPR available	PANTHER	PTHR11455:SF52	CRYPTOCHROME CIRCADIAN REGULATOR 5	coord: 14..67 coord: 93..133
IPR002081	Cryptochrome/DNA photolyase class 1	PANTHER	PTHR11455	CRYPTOCHROME	coord: 93..133
IPR002081	Cryptochrome/DNA photolyase class 1	PANTHER	PTHR11455	CRYPTOCHROME	coord: 14..67
IPR036155	Cryptochrome/photolyase, N-terminal domain superfamily	SUPERFAMILY	52425	Cryptochrome/photolyase, N-terminal domain	coord: 9..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC09G162310.1	CmUC09G162310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032922	circadian regulation of gene expression
biological_process	GO:0043153	entrainment of circadian clock by photoperiod
biological_process	GO:0009411	response to UV
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003914	DNA (6-4) photolyase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0071949	FAD binding