CmUC09G160850 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC09G160850
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	40S ribosomal S3-like protein
Location	CmU531Chr09: 744166 .. 751752 (-)
RNA-Seq Expression	CmUC09G160850
Synteny	CmUC09G160850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTCAGCATTTCCTAGGGTTTTCTTCCATCTTCAACCTAGAGTACACGCAGAACAGCTGTGAACGGCGACACCACCACCAACCAGTCATGGCTACTCAGATGAGCAAAAAGCGAAAGGTTGGTATCGATTTTTTCTCATTATCTTATTTTCTTTTCACAAGACACAAAGCATTCTACCCATTTTGATGTTATTGAGTCTTATTCTATTCAATCGGATACAGTTTGTGGCTGATGGAGTGTTCTTCGCGGAGCTTAACGAAGTTCTTACCAGAGAGCTTGCAGAGGATGGATACTCCGGAGTGGAGGTTAGGGTTACACCTATGCGGACTGAGATTATCATTCGGGCTACTCGCACACAGAATGTTCTTGGTAAGAGATTTTTTTTCTCGTAGGGTTGATATTCTTCCTGCAGATTTCCGGAATATGATTGAGAAGATTGAGTGTGTTTTTGTTTCTTATCAAGCCACCGCCTACGGGTGTCTGTCTGTCTTTTTTCCCCCTTTTTTTCTGCCTATTTCTATAACTTAAAATTGCCGCATCTAATTCTTGGTTTGCGTATTAATCTCTAATTGGAATCTCATGTGATTCTTGCGACGTTGAATCTCGAATTTTAGGATTTGTAGAATTTAAGACAGGCACAAGGAATTGTGTTGAAGTGTTAGTGCTTTGTGATTTGTTAAGGCCCTGAAAACTGGGCTGGATAAGGTGACTCAGGTGGGGGTTCAGTAAAATGTACATTTCAACTGTGTTTGTTGGTACTGGATACTGGACATAGTTGAATGTTTTGTTCGTGGAGGTTATTGGCGCTGTATGCTTGATTCGAGTTTGAAGCTTAACATCATCGGAGGATATGGAAGTAAATCTTATCTACTTCGCCAATGGGATAAAATCATTTTGCATACTCTGAAGTGAATTTGAATTCTTAGGTCAATAGCCGTTTCATTTTCCTCACAAGAGTCGAGATTAAATGTGTTATTACCTGTAGAGTAGTCTAATTTAGGTGTTCTCGGTCATTATTGCGATTGGATATGGTGTCTGACTATGAATTCATTTGTGACTTTAGGTGAGAAAGGAAGGAGAATTAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTTTATGCTGAAAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGTTACAAGCTTCTAGGAGGCCTTGCTGTGAGAAGGTATATTAAAGAAATTATGGATGCAATTATTGTGTGCTGTGTTGTAGTTTCTAGTTTGATTGGAAACTTTCAATCTAGGTGTATGTGATGACGAAATGATGAAAAATTTATTCCTGGATACTAATTGTCCGGTTTGGAACTACGACATTGTAATATGCTAAGCTCTTGATTTGAGCAATCACTCCTATTAAGCATTATTTGCATTTTTTCCAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAAGGATGTGAGGTCAGTTTCAATTATCTTTCTGGTATTTGTTCTTAATGTTTTGGTGGAACCAACTATCTAGTTTAATACATATTTATTAACTTGTATTTTGAATCATGCAGGTTATTGTTAGTGGTAAGCTGAGGGCTCAGCGTGCAAAATCCATGAAATTCAAGGATGGTTACATGATATCGTCTGGACAGCCAGTGAAAGAGTACATAGACTCTGCCGTGAGGCACGTTCTCCTTAGACAGGTCAGTTCAGTGTCATCTCAGGAGAAGGGGCTTTATAGCTTCCTGCTCCTAGTGGCATATTGTTTTCTTAAATCACATTTGTGGGTTCTTCTGTTCTTTAACTGATGCCTCTGTTTCTTCAATTTACAGGGTGTTTTGGGTATCAAGGTCAAGATCATGCTTGATTGGGACCCTAAGGGTAAGCAAGGTCCACCGACGCCTCTCCCTGATTTGGTTACCATCCATACTCCCAAGGAGGAAGAGGATTTCGTTAGGCCCGTGGCTGTGATTCCGACAACTGAAATTGAAGTTGGAGCAGCTTAAGAGAAGAGGAAGAGCAGGCATGAGGGAGGAGGAAGTAGTGTAGTGTTGCTATTATAATGTCATTTATTTCAGAATGTGGAATTCTAAGTTTTGATGTCGTTTTCTTTTGTTTTGAGTTCTGATTTTGCTATGATTTTGTTACAAATATTCACACAAACTTTGTTACGTTACTTTATGTTAGAGCCCCTAGTGTTTTAATGGTAATCTTAATTTACTTTTGTAACATGAGCCAAAAAGTCCCACCTCCATTGTGTTATAATCCATTTTCAGTTTGGTATTTTCGATTTTTATACTCTATTTTTATTTTTTGTGTGAGGACTCTAGTTTACCTTTTGTCTTAGAAAAATCCAAATTATCCAAGTATAATTTAATGCTTTTTGTTTTAATTTTTAATTTTTAATTTTAGATATTGGTTTTCATTTTTTTTCTTTTGATGGTAGGAAGGGTAGGGAAGATTGAACCTTATTCGAGTACATTCTTTTACTAGTTTTGACAGTTTGTTACGTATTGTTCTAAGTTATTTTTATTCATTGTACTAAGATTTTTCTGTAATACATTTGGCTAGTCACCTAATAATTTGTCAAAACTACTATTCTCATTTTCTCGGAAAAAAAAAAAGAAAAACTATTCTCAATCAGCCATCTGTCATCTTAACCACTCATCCTCATGTCAAATGACTGTATAGCTCGGCCCGTATGGAGATGTGTTTGGGCTCTCACGTTTGGGCCTTAGCCCATATTGAGTAGCCCAAATTTCGGATTTACAAATTCATCGGCACACGAAGAATGGCGAAACGATAAGCACGTGTGAACAAAAACTCTATATATTCGGTGGGGCCAACATGCGAAGAAACGAACCGTTTCGGAACCGAAGGTTGGAATTTAACTGCAATTGAGAAAACCTTTTGGAGTCCGGTTCTGCAATGGCGTTGTAGAACATCAGCGTGCTGAAAAAGCAAGCCCGAGATAGATACCCTATCTGGTGTGCACGTATCAATTCGAAATTCCTCTACATTTCACTCTTCTTTTTTCGAAATACACAAGTCTCTTTCTCTCTCAATCTCGATTTTCTTACATTTTCTTCGATCAAGCCATTGTTCGAGTGTGAAAAAGCTTCCTGAATAAGCCCACTACTGTCTCTTTCAGTTGATTTTCCCGTTTCAGTTGCTGAGTCAACTCGGCGTTCACCTGGTTCTATGGTAAGCATAAGCCGCGACAAACTTCATTTATCTGTGGTGATTTTCTTGTCTTTTCTCGTTTCCACTAGTGTTTAATGTATCTTTCTTTGAGACTCGTTAGTATTTGACTACTTCGTTGGAATTCAGTGTAGTAGAATAAACGTAGGAGCTATCTTGATTGGCTTGCTTATTGAAATTTTATAAAATTTTGGGTTTCTAATAAATTGGAAATGAATTTGTTTATATTAGAGAATTAAAGATTCATTAATTTATGGTTATTGATCGAGGTGTTAATTTGAATTCTGTGTTTATTTATTTATTTCTTGTCTGTTTTTGGGGGTTTCAGTTTATGTATTTGAGTTGCATGTGGTGGATTTTCCATGGAAACAGTGGTTGGATTTGTGGAGAATGAAGGGAAGATTATCGAAAGCAGGGCTGCTGAGGATGGCTCCACTCTGTCCCCAAATCAGATTGCCGACCCAGTTGTGTACAAACTTGTCAGGGTATTTTCTTTCACTTGTTTTGATTGAACTTTGAAGTTTTTGTACATTATTGATTTTCTTGTTTGAACGAATTTCATTTCTTTAGCTACTTGTGCCGATTCTGCATCTTTGTTGCTTATGGTACAATAATGTACAAGTCATACCCGACTCGAGGATAATCTCTCATGCTCGAAATTGAATAGCACCTCTAGGTTTTGAACTGTTCTTAGTGCAATCTATCCATATTCTTAAGTTACTGATTGTGGCTTCATAAGCCGTAGCTGAGAGCATCATTCTGATTGGAGTACTCTATGCAGGTTAAAGATACCATCGTACTCATAGAGATGTCAATTGATGAAGGTACCGAATGGATGTCTAAAAGTAAATGTGTTTCATATTGTGAGGACTAAGAAAATAGGTCGAATAAAGTTATAGCTCCCCCCTTTCTCCCAAGAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAAAAAAGAAAAAAGATCAAAGAAATTGTTGAAGTTTCTTGTTCCAAGTTCTGTTCTAGATAGCATGCATTTGTACGGATGGTGAGTTAGTAACATATCAGGTGGTATCATCACTTTGCTATAGTGTAATGGCCATTTTTTTTAAGAAAAGAATTGTTTATATTTTTTTTTTATATAGCTTGAAGACAACATACAACTTAAATCAGGCTTTGGTAATTTTGCTGAAATCGTCAGATATATGTGGAAGAAATGCAATGCGATCTTTTCATCGGTATTCTAATGGAGACTGCAGTGCTAGCATTACTTTCTTTTTCTTTTTCTCTCTCATTCCATATACGTTTTCATTTAAATTTCTCATGAAGTTTTGTATGTCATGTTTAGGTTGATGGTGATGGCAGATTCGTTCCTGCCACAGATGATGAAGTAATGGAGGTTGAGGATTTACTTGAAGACGGCAAAAATGAAAAAGTGGAAGATGCAGAACGAATTGTAGGATGCATACCCACTGAAGGCACTTTATTTGGGAAGCCTCATGTAGAAATCTCAAATGGTTGCTATTTCTTTCTTTCTTTTTTTGTCCCTCCCTTTTCTTTTGTTATTATGATTACTCCCTAGGATAGGATGGCTATTGAGCACTTCCAATCTTCGATGTATGGCGAGTGGGTTTAAATCTTGAGTAGATACTAATTACCTATGTTTTCAATTTTATTTTGTCTACCCTACATTCACTGGCTCTATTATTTAGTTACTTGTTTAGTAATACCTCTTGAATAGTCTCCTCTCAGTCTTTTTATATGTTGCTAGTCATATCAAATAGCATAGTTAATTATATTTGTTAAAATTATATATGTTGCTAGTCATGTCAAATAGCATAGTTAAAATTATATTTGTTGTTGATCTTGTACATCAATAGATGTATGATTATACACCTTTTGAGTTGAATTGGTTGGATTGGCGGGGGTTGAGTTTGGTTTATGGTGTGTGTATTGTACAGATATGCCAGGTTTACCACAATCTGAAACCTTTGAAGCTGCTGGAGAATATAATGCCCGATTGGAGGTACGAAATTTGCATTCTTAAGAAATGAAATGCTTTCTATCGTTGAAGATTGTGACTTGTAACATGGAGTGCAAAAGAAATATCTTTATATGCCATAATAGTTGTTAATATTTCTTAGTGTTCTCTGTTTATTTGTCTTTGATGGACTCCAGACTCTTCACAATAAATTTACAGATTTTTGTTGTTCTCTCCTAATATGATAGATTGTTTTCTTTTAAAGTTTCCATATAGAATCACTAATCATTCATTAATTTGTACTGATTTTGCCTTTTAATATCTTGTAGTACATTGAGGATGTATTGCAAAAGGTGAAACAGGAAGAGAGGCTTCGCTTAACATGTGGATTGCCTAACTATGCTTCTGCTTACGTGAATAGAGACAGGAAGAGTTTTGACGAGCATGGTAGATTGCCTGTTATTGATGAAAAGCTTCAATCCAATCTTTCTCTGCAGGAAATAACTCACTCAATTTCTCCTAGTTTAAATGAGAATCATGTGAGTAAACATGGGAGTCTGGGCGATTGTTTAAAGCATCCAGATAATTCGGTGGAATTCGAATCCTCAGATGCCCTCTGCACTACGTCTAACCCTGATTTTTCCCTGTTGAAGGGCGATGTATGCCTGGATAATCTGTCAATTAGAGAACTCCATGAATGTTTCAAAGCAGCTTTTGGGAGAGACACTACGGTTAAAGACAAATCATGGCTTAAGAGGAGAATTGCCATGGGATTGACCAACTCATGTGACATTCCAGCCTCATCTTTTATAATTAAGGAAGGCAAGTTTGTTGAAGAAAGTTCTCAAAAGGTGGAGGGCATGTCCAATGTTCAAACGACCGATGCTTTGAAAATTGAATGCAGAGGTTCACCAACAACTTACAGTTTGGAAGACAAGGACCGCCATCACTTTGAGGATATGGAACTTGATCATGGAAGTGAAGGTCAGCATGATGAGAGAGCCGCTGTTAAAAGAATTCGGAAGCCTACCAGGCGGTATATTGAAGAACTTTCTGAAGTAGAGTCAAGAGAGTATGTCCAAAAAGTGATTAGTTTGAATAAAAATACTATATCAGATGGCGTATCTACGAATTCCATTGCAAGACCTATTAAGAAAGTATATTCAGATGGGGGAAGAACTGTCATTACAAGATTGGATTCACTTGGTGGATCTGGCTTTCAGGTCCCATGTGTTTCTAGAGTTCGAAGGAGCCGTCCGAGGAAAGACGTTGTAGCCCTTGTGGTTAGTGTAATGTTTTTTTTCCCTCTCTTCAGTATATGGATAGGGATGCACTACTAAGTTAAATTTTGAAAAGTGAGCCCGTTGTTTATGGTTACTCAATTTTAATAATTGTTTGGATGGCTTCTGACTGCTGGGTTAATTGTATCTTTCTGCTTAGTTCGCCCTTCCAGACAAAGACCAGAATCCTTCAGTTGCAGTCACAGACGAAGCAGAGAAGAATTTGGAGCAGAAGCAAACAGTTTCTGGCAATGCATCGGATGATAACACGTCGGTTGTTCCAACATCAAAAGGTGGAGTGAGGAGAAAGCATCATCGTGCTTGGACTCTTGTTGAGGTCATCAAATTAGTAGAGGGTGTGTCGAAATGCGGTGCTGGGAGGTGGTCTGAGATTAAGAAACTATCATTTTCATCATACTCATACCGTACATCAGTTGATCTCAAGGTGCATTTTCTCACAAACTCTCCTCAGTAATATTTAGAATGTCATGCTGAATGGGTTTTATATAGAAAAAAATCAGTTTAGAATATAGAATAACAAAAATCTGGCATTTTTTTGGGGTTAAAAATCGGCCTAAAGAATCACAAAATAGGTTTCTCTTTTGATAGGATAAATGGAGAAACCTGCTTAAAGCTAGCTTCGCGCAGACACCTGTTGATGAAGGGGTAAGCATTCGATATGGAAAGTTTCTGTTATTTAGATTATGTCCTTTTGAGTTTACTATTTTTGGATAATGCGTGTAGATAAGTGCTCGGAAACATGCATCAATATCGATTCCTGCACAAATCTTGTTACGGGTGAGGGAGCTTGCTGAGATGCATGCTCAAATTCCTCCTTCAAATCATGGCCAAGGCAAGCTGGGTGGTGGAGTTACTGGGAGTATGCATGAGATGAGTTCTTCGGCAGTATGCTTGTGACATTGTAAATAATACAAACTTATCTTATTTTTCCCCCTTCAAAAAGTAATCGAAAAAAAAAAAAAAAAAACAAGAAAAAAAGAAATTACTGATCCGAATGCAGCAACAAATGTTTGTTGTTTGTTGCTGGTGACGAGAATTGTAGGAATTTCTTAAGCTTTGCTTAGTCATAAAAATCCTTGTTAACCGC

mRNA sequence

ATTCTCAGCATTTCCTAGGGTTTTCTTCCATCTTCAACCTAGAGTACACGCAGAACAGCTGTGAACGGCGACACCACCACCAACCAGTCATGGCTACTCAGATGAGCAAAAAGCGAAAGTTTGTGGCTGATGGAGTGTTCTTCGCGGAGCTTAACGAAGTTCTTACCAGAGAGCTTGCAGAGGATGGATACTCCGGAGTGGAGGTTAGGGTTACACCTATGCGGACTGAGATTATCATTCGGGCTACTCGCACACAGAATGTTCTTGGTGAGAAAGGAAGGAGAATTAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTTTATGCTGAAAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGTTACAAGCTTCTAGGAGGCCTTGCTGTGAGAAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAAGGATGTGAGGTTATTGTTAGTGGTAAGCTGAGGGCTCAGCGTGCAAAATCCATGAAATTCAAGGATGGTTACATGATATCGTCTGGACAGCCAGTGAAAGAGTACATAGACTCTGCCGTGAGGCACGTTCTCCTTAGACAGGGTGTTTTGGGTATCAAGGTCAAGATCATGCTTGATTGGGACCCTAAGGGTAAGCAAGGTCCACCGACGCCTCTCCCTGATTTGGTTACCATCCATACTCCCAAGGAGGAAGAGGATTTCGTTAGGCCCGTGGCTGTGATTCCGACAACTGAAATTGAACCCATATTGAGTAGCCCAAATTTCGGATTTACAAATTCATCGGCACACGAAGAATGGCGAAACGATAAGCACTTGCTGAGTCAACTCGGCGTTCACCTGGTTCTATGTTTATGTATTTGAGTTGCATGTGGTGGATTTTCCATGGAAACAGTGGTTGGATTTGTGGAGAATGAAGGGAAGATTATCGAAAGCAGGGCTGCTGAGGATGGCTCCACTCTGTCCCCAAATCAGATTGCCGACCCAGTTGTGTACAAACTTGTCAGGGTTAAAGATACCATCGTACTCATAGAGATGTCAATTGATGAAGCAGATATATGTGGAAGAAATGCAATGCGATCTTTTCATCGGTTGATGGTGATGGCAGATTCGTTCCTGCCACAGATGATGAAGTAATGGAGGTTGAGGATTTACTTGAAGACGGCAAAAATGAAAAAGTGGAAGATGCAGAACGAATTGTAGGATGCATACCCACTGAAGGCACTTTATTTGGGAAGCCTCATGTAGAAATCTCAAATGATATGCCAGGTTTACCACAATCTGAAACCTTTGAAGCTGCTGGAGAATATAATGCCCGATTGGAGTACATTGAGGATGTATTGCAAAAGGTGAAACAGGAAGAGAGGCTTCGCTTAACATGTGGATTGCCTAACTATGCTTCTGCTTACGTGAATAGAGACAGGAAGAGTTTTGACGAGCATGGTAGATTGCCTGTTATTGATGAAAAGCTTCAATCCAATCTTTCTCTGCAGGAAATAACTCACTCAATTTCTCCTAGTTTAAATGAGAATCATGTGAGTAAACATGGGAGTCTGGGCGATTGTTTAAAGCATCCAGATAATTCGGTGGAATTCGAATCCTCAGATGCCCTCTGCACTACGTCTAACCCTGATTTTTCCCTGTTGAAGGGCGATGTATGCCTGGATAATCTGTCAATTAGAGAACTCCATGAATGTTTCAAAGCAGCTTTTGGGAGAGACACTACGGTTAAAGACAAATCATGGCTTAAGAGGAGAATTGCCATGGGATTGACCAACTCATGTGACATTCCAGCCTCATCTTTTATAATTAAGGAAGGCAAGTTTGTTGAAGAAAGTTCTCAAAAGGTGGAGGGCATGTCCAATGTTCAAACGACCGATGCTTTGAAAATTGAATGCAGAGGTTCACCAACAACTTACAGTTTGGAAGACAAGGACCGCCATCACTTTGAGGATATGGAACTTGATCATGGAAGTGAAGGTCAGCATGATGAGAGAGCCGCTGTTAAAAGAATTCGGAAGCCTACCAGGCGGTATATTGAAGAACTTTCTGAAGTAGAGTCAAGAGAGTATGTCCAAAAAGTGATTAGTTTGAATAAAAATACTATATCAGATGGCGTATCTACGAATTCCATTGCAAGACCTATTAAGAAAGTATATTCAGATGGGGGAAGAACTGTCATTACAAGATTGGATTCACTTGGTGGATCTGGCTTTCAGGTCCCATGTGTTTCTAGAGTTCGAAGGAGCCGTCCGAGGAAAGACGTTGTAGCCCTTGTGTTCGCCCTTCCAGACAAAGACCAGAATCCTTCAGTTGCAGTCACAGACGAAGCAGAGAAGAATTTGGAGCAGAAGCAAACAGTTTCTGGCAATGCATCGGATGATAACACGTCGGTTGTTCCAACATCAAAAGGTGGAGTGAGGAGAAAGCATCATCGTGCTTGGACTCTTGTTGAGGTCATCAAATTAGTAGAGGGTGTGTCGAAATGCGGTGCTGGGAGGTGGTCTGAGATTAAGAAACTATCATTTTCATCATACTCATACCGTACATCAGTTGATCTCAAGGTTTCTCTTTTGATAGGATAAATGGAGAAACCTGCTTAAAGCTAGCTTCGCGCAGACACCTGTTGATGAAGGGATAAGTGCTCGGAAACATGCATCAATATCGATTCCTGCACAAATCTTGTTACGGGTGAGGGAGCTTGCTGAGATGCATGCTCAAATTCCTCCTTCAAATCATGGCCAAGGCAAGCTGGGTGGTGGAGTTACTGGGAGTATGCATGAGATGAGTTCTTCGGCAGTATGCTTGTGACATTGTAAATAATACAAACTTATCTTATTTTTCCCCCTTCAAAAAGTAATCGAAAAAAAAAAAAAAAAAACAAGAAAAAAAGAAATTACTGATCCGAATGCAGCAACAAATGTTTGTTGTTTGTTGCTGGTGACGAGAATTGTAGGAATTTCTTAAGCTTTGCTTAGTCATAAAAATCCTTGTTAACCGC

Coding sequence (CDS)

ATGGCTACTCAGATGAGCAAAAAGCGAAAGTTTGTGGCTGATGGAGTGTTCTTCGCGGAGCTTAACGAAGTTCTTACCAGAGAGCTTGCAGAGGATGGATACTCCGGAGTGGAGGTTAGGGTTACACCTATGCGGACTGAGATTATCATTCGGGCTACTCGCACACAGAATGTTCTTGGTGAGAAAGGAAGGAGAATTAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTTTATGCTGAAAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGTTACAAGCTTCTAGGAGGCCTTGCTGTGAGAAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAAGGATGTGAGGTTATTGTTAGTGGTAAGCTGAGGGCTCAGCGTGCAAAATCCATGAAATTCAAGGATGGTTACATGATATCGTCTGGACAGCCAGTGAAAGAGTACATAGACTCTGCCGTGAGGCACGTTCTCCTTAGACAGGGTGTTTTGGGTATCAAGGTCAAGATCATGCTTGATTGGGACCCTAAGGGTAAGCAAGGTCCACCGACGCCTCTCCCTGATTTGGTTACCATCCATACTCCCAAGGAGGAAGAGGATTTCGTTAGGCCCGTGGCTGTGATTCCGACAACTGAAATTGAACCCATATTGAGTAGCCCAAATTTCGGATTTACAAATTCATCGGCACACGAAGAATGGCGAAACGATAAGCACTTGCTGAGTCAACTCGGCGTTCACCTGGTTCTATGTTTATGTATTTGA

Protein sequence

MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEPILSSPNFGFTNSSAHEEWRNDKHLLSQLGVHLVLCLCI

Homology

[Close]

BLAST of CmUC09G160850 vs. NCBI nr
Match: KAE8646506.1 (hypothetical protein Csa_015876 [Cucumis sativus])

HSP 1 Score: 474.2 bits (1219), Expect = 7.7e-130
Identity = 250/288 (86.81%), Postives = 259/288 (89.93%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEPILSS--- 240
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIH+PKEEEDF+RPVAVIPTTEIE ++++   
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPTTEIERLINAWKI 240

Query: 241 --------------PNFGFTNSSAHEEWRNDKHLLSQLGVHLVLCLCI 272
                         PNF FT+    +  R   HL SQLG+HLVLCLCI
Sbjct: 241 YSGFTCWAVAHVEEPNFEFTHMLGVDFPR--FHLPSQLGLHLVLCLCI 286

[Close]

BLAST of CmUC09G160850 vs. NCBI nr
Match: KAG6593545.1 (40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 459.9 bits (1182), Expect = 1.5e-125
Identity = 241/273 (88.28%), Postives = 248/273 (90.84%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE--PILSSP 240
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEE+F+RP AVIPT EIE   +L  P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEKNSVLKKP 240

Query: 241 NFGFTNSSAHEEWRNDKHLLSQLGVHLVLCLCI 272
                ++       +  H LS L  HL+LCLCI
Sbjct: 241 K-AEKDTLFRVHLISRFHWLSLLDFHLILCLCI 272

[Close]

BLAST of CmUC09G160850 vs. NCBI nr
Match: XP_004141698.1 (40S ribosomal protein S3-3 [Cucumis sativus])

HSP 1 Score: 451.1 bits (1159), Expect = 7.0e-123
Identity = 230/232 (99.14%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE 233
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIH+PKEEEDF+RPVAVIPTTEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPTTEIE 232

[Close]

BLAST of CmUC09G160850 vs. NCBI nr
Match: XP_022953609.1 (40S ribosomal protein S3-3-like [Cucurbita moschata] >KAG6575449.1 40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013991.1 40S ribosomal protein S3-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 450.7 bits (1158), Expect = 9.1e-123
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE 233
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDF+RPVAVIPT EIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPVAVIPTAEIE 232

[Close]

BLAST of CmUC09G160850 vs. NCBI nr
Match: XP_023547512.1 (40S ribosomal protein S3-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.1 bits (1154), Expect = 2.7e-122
Identity = 229/232 (98.71%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE 233
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDF+RP AVIPT EIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPAAVIPTAEIE 232

[Close]

BLAST of CmUC09G160850 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 5.8e-112
Identity = 204/233 (87.55%), Postives = 218/233 (93.56%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEP 234
           VLG+KVKIMLDWDPKGKQGP TPLPD+V IHTPKE++ ++ P  V+      P
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVP 233

[Close]

BLAST of CmUC09G160850 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.2e-110
Identity = 203/225 (90.22%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAV 226
           VLGIKVK+MLDWDPKG  GP TPLPD+V IH+PKEEE    P  V
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQV 225

[Close]

BLAST of CmUC09G160850 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.5e-109
Identity = 203/233 (87.12%), Postives = 215/233 (92.27%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPV-AVIPTTEIE 233
           VLGIKVKIMLDWDP GK GP TPLPD+V IH PK++  +  P  A  P T ++
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTLVQ 233

[Close]

BLAST of CmUC09G160850 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 356.3 bits (913), Expect = 3.1e-97
Identity = 187/231 (80.95%), Postives = 198/231 (85.71%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEI 232
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E        ++PTT I
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE--------IVPTTPI 223

[Close]

BLAST of CmUC09G160850 vs. ExPASy Swiss-Prot
Match: P47835 (40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 3.1e-97
Identity = 187/231 (80.95%), Postives = 198/231 (85.71%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1   MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEI 232
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E        ++PTT I
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE--------IVPTTPI 223

[Close]

BLAST of CmUC09G160850 vs. ExPASy TrEMBL
Match: A0A0A0KCL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450550 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 250/291 (85.91%), Postives = 258/291 (88.66%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEPILSS--- 240
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIH+PKEEEDF+RPVAVIPTTEIE ++++   
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPTTEIERLINAWKI 240

Query: 241 --------------PNFGFTNSSAHEEWRND---KHLLSQLGVHLVLCLCI 272
                         PNF FT+         D    HL SQLG+HLVLCLCI
Sbjct: 241 YSGFTCWAVAHVEEPNFEFTHMLGVLSLSVDFPRFHLPSQLGLHLVLCLCI 291

[Close]

BLAST of CmUC09G160850 vs. ExPASy TrEMBL
Match: A0A6J1GQ60 (40S ribosomal protein S3-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456093 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 4.4e-123
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE 233
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDF+RPVAVIPT EIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPVAVIPTAEIE 232

[Close]

BLAST of CmUC09G160850 vs. ExPASy TrEMBL
Match: A0A6J1D813 (40S ribosomal protein S3-3 OS=Momordica charantia OX=3673 GN=LOC111017761 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.3e-122
Identity = 229/232 (98.71%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE 233
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEE+F+RPVAVIPT EIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIE 232

[Close]

BLAST of CmUC09G160850 vs. ExPASy TrEMBL
Match: A0A6J1JPM9 (40S ribosomal protein S3-3-like OS=Cucurbita maxima OX=3661 GN=LOC111488704 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.9e-122
Identity = 229/232 (98.71%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFP NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPVNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE 233
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDF+RPVAVIPT EIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPVAVIPTAEIE 232

[Close]

BLAST of CmUC09G160850 vs. ExPASy TrEMBL
Match: A0A6J1KD29 (40S ribosomal protein S3-3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494511 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.4e-122
Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE 233
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIH PKEEE+F+RPVAVIPT EIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHIPKEEEEFIRPVAVIPTAEIE 232

[Close]

BLAST of CmUC09G160850 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 405.2 bits (1040), Expect = 4.1e-113
Identity = 204/233 (87.55%), Postives = 218/233 (93.56%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEP 234
           VLG+KVKIMLDWDPKGKQGP TPLPD+V IHTPKE++ ++ P  V+      P
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVP 233

[Close]

BLAST of CmUC09G160850 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 399.4 bits (1025), Expect = 2.2e-111
Identity = 203/225 (90.22%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPVAV 226
           VLGIKVK+MLDWDPKG  GP TPLPD+V IH+PKEEE    P  V
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQV 225

[Close]

BLAST of CmUC09G160850 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 396.0 bits (1016), Expect = 2.5e-110
Identity = 203/233 (87.12%), Postives = 215/233 (92.27%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFVRPV-AVIPTTEIE 233
           VLGIKVKIMLDWDP GK GP TPLPD+V IH PK++  +  P  A  P T ++
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTLVQ 233

The following BLAST results are available for this feature:

BLAST of CmUC09G160850 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646506.1	7.7e-130	86.81	hypothetical protein Csa_015876 [Cucumis sativus]	[more]
KAG6593545.1	1.5e-125	88.28	40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004141698.1	7.0e-123	99.14	40S ribosomal protein S3-3 [Cucumis sativus]	[more]
XP_022953609.1	9.1e-123	99.14	40S ribosomal protein S3-3-like [Cucurbita moschata] >KAG6575449.1 40S ribosomal...	[more]
XP_023547512.1	2.7e-122	98.71	40S ribosomal protein S3-3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmUC09G160850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJA6	5.8e-112	87.55	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9M339	3.2e-110	90.22	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9SIP7	3.5e-109	87.12	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
P02350	3.1e-97	80.95	40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2	[more]
P47835	3.1e-97	80.95	40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1	[more]

BLAST of CmUC09G160850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCL9	1.1e-129	85.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450550 PE=3 SV=1	[more]
A0A6J1GQ60	4.4e-123	99.14	40S ribosomal protein S3-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456093 PE...	[more]
A0A6J1D813	1.3e-122	98.71	40S ribosomal protein S3-3 OS=Momordica charantia OX=3673 GN=LOC111017761 PE=3 S...	[more]
A0A6J1JPM9	2.9e-122	98.71	40S ribosomal protein S3-3-like OS=Cucurbita maxima OX=3661 GN=LOC111488704 PE=3...	[more]
A0A6J1KD29	6.4e-122	98.28	40S ribosomal protein S3-3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149451...	[more]

BLAST of CmUC09G160850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35530.1	4.1e-113	87.55	Ribosomal protein S3 family protein	[more]
AT3G53870.1	2.2e-111	90.22	Ribosomal protein S3 family protein	[more]
AT2G31610.1	2.5e-110	87.12	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 20..93 e-value: 1.4E-12 score: 47.3
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 21..92 score: 11.333969
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 93..219 e-value: 2.9E-66 score: 223.2
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 93..191
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..91 e-value: 2.5E-48 score: 164.0
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 8..210 e-value: 3.5E-71 score: 237.0
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 106..188 e-value: 6.6E-25 score: 87.4
None	No IPR available	PANTHER	PTHR11760:SF52	40S RIBOSOMAL PROTEIN S3-RELATED	coord: 3..232
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 3..232
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 15..95 e-value: 4.71558E-52 score: 162.777
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 147..183
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC09G160850.1	CmUC09G160850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome