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CmUC08G158270 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAGATCCGCATCCATGGCCGACGTAGGCTTGCCATTGAATATTCTGCTTTTACTCCCAATTCCCAGGCGTGACTCGTGAGTATCTCGTTGATGGCTGACGTCGAGTTCGTTTTCGCTCACTGAAGTTTGAATCGAAGCTCCCGAAATCACTGAGCGAGAAGACAGAATCGCGAAAAAACTTGTGCGATTCAATGAATAGCTTGCGTCGACGTTGCGGCTGGCTTCTGCTGCCAATCGTTGCCAATAGAAATATAAGCACCAAAGCTTCTCCTTCTGTGTCTGCTAAGATTCAATGGAGGGCGTATTTCAGTTTCGGGTCAAATCCAATGAGACACACAATCAGAGAAAGCAAAATTTCCTGCCCATCTACTCGGCATCGATTCTCTTCCTCGTCTTCATCGAAATCAGGGATTGGATTTGTTGGATGGTACATGAGAAAACTCGACACCCACCCATTTATCACTAAAAGTATCACTTCTTCGTTGATTTATGCGGCTGCTGACCTAACCTCTCAGGTAGAAGATGGATTTTATATTTCTTTGCAATTCACTTCCGCCCTCTTTCATAAGTGTTTTCCCATTCATGGTACAGTCCGAAAATTACATGCATTCCATGAATAAACGAGATCGAGCATTCGATAACATTACGATAAGATGCCTCCTCTCACGTAGATGATAAATAGTATATCGGTATTATGTCAAGTCCATCTAAATAGTAGTGGAGAATGGAGAAATGGAGACTATAGAGAGTGCTGCAATTTTGTTCTTTAACGGTTCCTAGTCTGGAGTGGTTTGGGAATAAAATGCGTAGAGTTAGGCTCTGCACCATTTGAGGTTTCATTAGTATATCTACTTGCATAGATGTATCTTAAAGCGTGTCCAGTGTCTTTCTTAAGAAAGAAATTGAAGCCCATTTACAACCATTTCAATGTAGAAGCCAAATGCGTTACTATCTTTGTGCTTGGAATCTTGAGTGGTTGCATGTATTGGTACTTTGATACAATCTAGTTCGATAAATAGACTTTAAAGATCTTCTGCTTTGTTTTGTGTTAAATATACTGTAGGTTTTACAGGGATGGGCAGATGTCATTCATGCCCTCATCTGTGCAACAGATTCATTTTTGCCATGATTTGTGTTGAAAATTTAGGATATGATATAATCTCATTTGTTGCTTTTGTGGTCTTGCTGCGCGTGTAAATTATGTGTAAATCAAAATGTCTTTTAGAAAGTGTTACAATGTAAACTTTCCTCTCTAAAAGGATGGCATAAGAATGTCTTCTTTTTTGGGCTGTTCGTATTTATGCTTAACCTCTCGTTCTTTGTATTTCATGGCTATTGATGAATTTGGTTCACTTGTTCTATTTTTCATCAGTTTTCCAATATTCCCGTCATTGTGATGACAACACCCTTTGCAATTTACATTTCTTATACCCTCTTGTTCTGGTTATTTTGTATTCTAATTGTTTGGTTTACATAACATTTTGTCAGATGATTACAGTGCCATCTCCTGGCTCTTTTGACTTAATAAGGACAACACGGATGGCTGCTTATGGAATGTTGATATTAGGGCCATCCCAGCATTTGTGGTTTAATTTTATGTCTACAATCTCACCATCGCGAGATTTGTTTTCAACTTTCAAGAAGATTTTTCTGGGGCAGGCTGTGTATGGACCTAGTATTACCTCTGTTTTCTTCTCCTATAATGCATCTTTGCAAGGTAATTAGAAAGCCGAAGTTTTAGAACTTCAGATAATCTTTCAATATCTCACCATAGTTGGCGGGATTTGTCAACGACCACCCTGGCTTCTACAACTTCATCGTTAGATGGTTTGAACTTTGATGGAGTGTGCTATTGGATATTTGGGTGCCCTTTCTTGCACATTTTTGAAGTATGGAAAAAGATAGTCTTTTAACTAAGTTTTAAATGTAATTCAGGGCCTCGGTCTTTTGGGCTGAAATTAGAGTGCTTCTTATTGCTATCCGTTGGTAGTGCTTTAGCCCCTCTGGCTTGCTCAGCTCAAGTATTTGTACACTTATCTTACTTTGGTTGGAGGCTTTTGATGACTGCCACATGGCTTCATCAAGCTCATGAGTTTTATTGATAATAAAATTCTATAACTTTATGGGGGGCCCGTTTGGAGAATAGGGGTAGGAGGGTTGTTTCTATTTGGTTCCATTTTCTTAGAAGTTAATTTCGGTGCCAATTTTCAGTTTTTCTTGGATCAATCGGTTTCTTTGACATTAGATTGAACCAATAGGTCCAGGTCTAACGGCAAGCAGACATTATTATTTGAAGAAAATTTGAAAACGTATACAACAACCAACTTCATAGAAAATGGAACCGATCAAAACCAATCAAAATGAACCGAACGACTGACTTTTAATCTGGAATATTGTGAAATCAAACCTGACAAACGTGTGTTACTTAGACGTCTCCTTTTTCTTTTTTCCTTCCCATCTCCGCTCATGGAAACATTAATAAAATGTGGACCAAGTAGGCTTTTTAATTATCTGCTAATTTTGGGTTTTTTATGCTGAAATCCGTAACTTCCCCTGTTGAAGTCATCAGTTAGCCCTACTGGCTTTTAAGACTTAGAACCTTCCTTACAGCCAGACCACTATTCTCTGAAAGTATGCTCAATGGTTGATTTATGAATTGTGTAATAATGCATGTAGTTCTCATAATCCGTGTATGATACTAGTTATAGTTATGACATTATATCCTAATACCATTCGTATTACGCTGGCTGTGATACAGTATTCTGAATGCATTATGTCCAAATTCAGGTGAAAGTGGCAGTGAGATTGCTGCTAGATTAAAGCGTGATTTGCTTCCAACATTGTTAAATGGACTCTTGTTTTGGCCAGTCTGTGATTTTCTCACATACAAATTTGTCCCCGTTCATCTACAGGTATGTACATTGTACTCACTACTCACTGCATACAGAAATAATAAAGGAATCATATCTCCGAGATGAGATACTGCACTCTAATCTCTGTTTTGATCGCTTAATGTAGTTATCTGCTCCGTTTGCAACTATTCAGTTTTGGAACATTGATTTTGCAGCCATTGACAAACAGTTCGTTTGCATATATATGGACCATCTATCTGACATACATGGCAAGCTTGAAAGGAGTTGATATCAATTGAAGCAGTAGTAGATTTGAAGATGCTGCCATCGATTCTTTTATTCATCTGTCTTGTTTGGCAAAAGCCCCTGTGAAGCAGTAGGCTTCTCTATAGTGCTTGGTAAGTCAAACTTTTTTTACTTGGCTGGATTTTCCTTAAATATGAATATGACTCAAATGTTTCATTTATAAATATGTGTAATACCAAAGATGTTTACATGATTCAATCTCATTTGTAGCTGAAAATGTGACAGCTCTTTTCGCAGCAGCAATTACTCCTCATTGTCTTTGATCTACATGGTTACTTTAAATGTGACAGCTCCTATTTATATTACTTGTGAATGGCTCTTATAATTCGCATACATCAGTTTAATTTGGGTATGCTGCTGCGACCCAAAAGAGAGGCCCTTCAATTCAAGGACTAACTCGCGTGACGGCCTGCAGTGCATTTGCTGTTTGTTTGATTATGTAATTTTAATGGTGATATGTCAGACTCATACAATACCGGCAATGAATTTATATGTTCTTGGTACGTGGTATTTATTCCTCCTACTCTTTTAGCACAATCTCTTCTTTGACTTTAAATACTTAATGGAATCCAAATTTCAG TTTAGATCCGCATCCATGGCCGACGTAGGCTTGCCATTGAATATTCTGCTTTTACTCCCAATTCCCAGGCGTGACTCGTGAGTATCTCGTTGATGGCTGACGTCGAGTTCGTTTTCGCTCACTGAAGTTTGAATCGAAGCTCCCGAAATCACTGAGCGAGAAGACAGAATCGCGAAAAAACTTGTGCGATTCAATGAATAGCTTGCGTCGACGTTGCGGCTGGCTTCTGCTGCCAATCGTTGCCAATAGAAATATAAGCACCAAAGCTTCTCCTTCTGTGTCTGCTAAGATTCAATGGAGGGCGTATTTCAGTTTCGGGTCAAATCCAATGAGACACACAATCAGAGAAAGCAAAATTTCCTGCCCATCTACTCGGCATCGATTCTCTTCCTCGTCTTCATCGAAATCAGGGATTGGATTTGTTGGATGGTACATGAGAAAACTCGACACCCACCCATTTATCACTAAAAGTATCACTTCTTCGTTGATTTATGCGGCTGCTGACCTAACCTCTCAGATGATTACAGTGCCATCTCCTGGCTCTTTTGACTTAATAAGGACAACACGGATGGCTGCTTATGGAATGTTGATATTAGGGCCATCCCAGCATTTGTGGTTTAATTTTATGTCTACAATCTCACCATCGCGAGATTTGTTTTCAACTTTCAAGAAGATTTTTCTGGGGCAGGCTGTGTATGGACCTAGTATTACCTCTGTTTTCTTCTCCTATAATGCATCTTTGCAAGGGCCTCGGTCTTTTGGGCTGAAATTAGAGTGCTTCTTATTGCTATCCGTTGGTAGTGCTTTAGCCCCTCTGGCTTGCTCAGCTCAACCCTACTGGCTTTTAAGACTTAGAACCTTCCTTACAGCCAGACCACTATTCTCTGAAAGTGAAAGTGGCAGTGAGATTGCTGCTAGATTAAAGCGTGATTTGCTTCCAACATTGTTAAATGGACTCTTGTTTTGGCCAGTCTGTGATTTTCTCACATACAAATTTGTCCCCGTTCATCTACAGTTATCTGCTCCGTTTGCAACTATTCAGTTTTGGAACATTGATTTTGCAGCCATTGACAAACAGTTCGTTTGCATATATATGGACCATCTATCTGACATACATGGCAAGCTTGAAAGGAGTTGATATCAATTGAAGCAGTAGTAGATTTGAAGATGCTGCCATCGATTCTTTTATTCATCTGTCTTGTTTGGCAAAAGCCCCTGTGAAGCAGTAGGCTTCTCTATAGTGCTTGGTAAGTCAAACTTTTTTTACTTGGCTGGATTTTCCTTAAATATGAATATGACTCAAATGTTTCATTTATAAATATGTGTAATACCAAAGATGTTTACATGATTCAATCTCATTTGTAGCTGAAAATGTGACAGCTCTTTTCGCAGCAGCAATTACTCCTCATTGTCTTTGATCTACATGGTTACTTTAAATGTGACAGCTCCTATTTATATTACTTGTGAATGGCTCTTATAATTCGCATACATCAGTTTAATTTGGGTATGCTGCTGCGACCCAAAAGAGAGGCCCTTCAATTCAAGGACTAACTCGCGTGACGGCCTGCAGTGCATTTGCTGTTTGTTTGATTATGTAATTTTAATGGTGATATGTCAGACTCATACAATACCGGCAATGAATTTATATGTTCTTGGTACGTGGTATTTATTCCTCCTACTCTTTTAGCACAATCTCTTCTTTGACTTTAAATACTTAATGGAATCCAAATTTCAG ATGAATAGCTTGCGTCGACGTTGCGGCTGGCTTCTGCTGCCAATCGTTGCCAATAGAAATATAAGCACCAAAGCTTCTCCTTCTGTGTCTGCTAAGATTCAATGGAGGGCGTATTTCAGTTTCGGGTCAAATCCAATGAGACACACAATCAGAGAAAGCAAAATTTCCTGCCCATCTACTCGGCATCGATTCTCTTCCTCGTCTTCATCGAAATCAGGGATTGGATTTGTTGGATGGTACATGAGAAAACTCGACACCCACCCATTTATCACTAAAAGTATCACTTCTTCGTTGATTTATGCGGCTGCTGACCTAACCTCTCAGATGATTACAGTGCCATCTCCTGGCTCTTTTGACTTAATAAGGACAACACGGATGGCTGCTTATGGAATGTTGATATTAGGGCCATCCCAGCATTTGTGGTTTAATTTTATGTCTACAATCTCACCATCGCGAGATTTGTTTTCAACTTTCAAGAAGATTTTTCTGGGGCAGGCTGTGTATGGACCTAGTATTACCTCTGTTTTCTTCTCCTATAATGCATCTTTGCAAGGGCCTCGGTCTTTTGGGCTGAAATTAGAGTGCTTCTTATTGCTATCCGTTGGTAGTGCTTTAGCCCCTCTGGCTTGCTCAGCTCAACCCTACTGGCTTTTAAGACTTAGAACCTTCCTTACAGCCAGACCACTATTCTCTGAAAGTGAAAGTGGCAGTGAGATTGCTGCTAGATTAAAGCGTGATTTGCTTCCAACATTGTTAAATGGACTCTTGTTTTGGCCAGTCTGTGATTTTCTCACATACAAATTTGTCCCCGTTCATCTACAGTTATCTGCTCCGTTTGCAACTATTCAGTTTTGGAACATTGATTTTGCAGCCATTGACAAACAGTTCGTTTGCATATATATGGACCATCTATCTGACATACATGGCAAGCTTGAAAGGAGTTGA MNSLRRRCGWLLLPIVANRNISTKASPSVSAKIQWRAYFSFGSNPMRHTIRESKISCPSTRHRFSSSSSSKSGIGFVGWYMRKLDTHPFITKSITSSLIYAAADLTSQMITVPSPGSFDLIRTTRMAAYGMLILGPSQHLWFNFMSTISPSRDLFSTFKKIFLGQAVYGPSITSVFFSYNASLQGPRSFGLKLECFLLLSVGSALAPLACSAQPYWLLRLRTFLTARPLFSESESGSEIAARLKRDLLPTLLNGLLFWPVCDFLTYKFVPVHLQLSAPFATIQFWNIDFAAIDKQFVCIYMDHLSDIHGKLERS Homology
BLAST of CmUC08G158270 vs. NCBI nr
Match: XP_038885096.1 (protein SYM1-like [Benincasa hispida]) HSP 1 Score: 397.9 bits (1021), Expect = 8.1e-107 Identity = 211/287 (73.52%), Postives = 219/287 (76.31%), Query Frame = 0
BLAST of CmUC08G158270 vs. NCBI nr
Match: XP_008444568.1 (PREDICTED: PXMP2/4 family protein 4 [Cucumis melo]) HSP 1 Score: 377.9 bits (969), Expect = 8.7e-101 Identity = 204/291 (70.10%), Postives = 218/291 (74.91%), Query Frame = 0
BLAST of CmUC08G158270 vs. NCBI nr
Match: KAA0060944.1 (PXMP2/4 family protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 375.9 bits (964), Expect = 3.3e-100 Identity = 201/278 (72.30%), Postives = 214/278 (76.98%), Query Frame = 0
BLAST of CmUC08G158270 vs. NCBI nr
Match: KAG7029313.1 (SYM1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 357.8 bits (917), Expect = 9.3e-95 Identity = 191/279 (68.46%), Postives = 210/279 (75.27%), Query Frame = 0
BLAST of CmUC08G158270 vs. NCBI nr
Match: KAG6598343.1 (PXMP2/4 family protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 357.8 bits (917), Expect = 9.3e-95 Identity = 191/279 (68.46%), Postives = 210/279 (75.27%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy Swiss-Prot
Match: Q4IPX8 (Protein SYM1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SYM1 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.6e-09 Identity = 34/113 (30.09%), Postives = 59/113 (52.21%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.1e-09 Identity = 43/192 (22.40%), Postives = 74/192 (38.54%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy Swiss-Prot
Match: Q2TXA2 (Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=sym1 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.6e-07 Identity = 32/109 (29.36%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy Swiss-Prot
Match: P0CQ39 (Protein SYM1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=SYM1 PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.5e-07 Identity = 30/111 (27.03%), Postives = 54/111 (48.65%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy Swiss-Prot
Match: P0CQ38 (Protein SYM1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=SYM1 PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.5e-07 Identity = 30/111 (27.03%), Postives = 54/111 (48.65%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy TrEMBL
Match: A0A1S3BA50 (PXMP2/4 family protein 4 OS=Cucumis melo OX=3656 GN=LOC103487845 PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 4.2e-101 Identity = 204/291 (70.10%), Postives = 218/291 (74.91%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy TrEMBL
Match: A0A5A7V0U7 (PXMP2/4 family protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00770 PE=3 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.6e-100 Identity = 201/278 (72.30%), Postives = 214/278 (76.98%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy TrEMBL
Match: A0A0A0LL22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354840 PE=3 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 4.5e-95 Identity = 192/287 (66.90%), Postives = 207/287 (72.13%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy TrEMBL
Match: A0A6J1K760 (PXMP2/4 family protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111492264 PE=3 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 3.8e-94 Identity = 190/279 (68.10%), Postives = 209/279 (74.91%), Query Frame = 0
BLAST of CmUC08G158270 vs. ExPASy TrEMBL
Match: A0A6J1HHJ7 (PXMP2/4 family protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463001 PE=3 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 6.5e-94 Identity = 188/279 (67.38%), Postives = 209/279 (74.91%), Query Frame = 0
BLAST of CmUC08G158270 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 211.8 bits (538), Expect = 7.7e-55 Identity = 108/222 (48.65%), Postives = 139/222 (62.61%), Query Frame = 0
BLAST of CmUC08G158270 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 200.3 bits (508), Expect = 2.3e-51 Identity = 113/254 (44.49%), Postives = 144/254 (56.69%), Query Frame = 0
BLAST of CmUC08G158270 vs. TAIR 10
Match: AT4G33905.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 199.5 bits (506), Expect = 3.9e-51 Identity = 104/223 (46.64%), Postives = 134/223 (60.09%), Query Frame = 0
BLAST of CmUC08G158270 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 65.5 bits (158), Expect = 8.9e-11 Identity = 33/112 (29.46%), Postives = 56/112 (50.00%), Query Frame = 0
BLAST of CmUC08G158270 vs. TAIR 10
Match: AT2G42770.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 64.7 bits (156), Expect = 1.5e-10 Identity = 42/168 (25.00%), Postives = 65/168 (38.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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