CmUC08G154830 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G154830
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	photosynthetic NDH subunit of subcomplex B 3, chloroplastic
Location	CmU531Chr08: 24201248 .. 24206596 (-)
RNA-Seq Expression	CmUC08G154830
Synteny	CmUC08G154830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGGTATTTGATTATAGCTTTTATCTTGAATATTATGTTAATCCATACATTTAAATAGGTTTATACATACATATATATACACACACGTTAAAACTAAAAAAATTATTATAAATAGAAAAAATATCAAACTATTTATAATTATAGAAAATTTTAATTGTCTATTAATTATAAACTTCTATTATTTGAGAGATAGAAGTCAATCGTAGTCTAAACGATGTCGTTGTTTATCACCGATAGTTCTTAAAATAACGTATTACTAATTTTTAAAACAAAATCCTAAAAGAATGTTCGAATTGATTTAATTATATAAGTTTAGAATTTTGGTTAAAGGAAGTTTAAGTGATACATAACCAGCAAGACGCACTTAACTTCCCGCCCTCTCTAGAAGTCAGTTTTTGAAAATTAGCCGCGACGACACAACAAATTTACCAAATTACCCCTAAAAACTCAAGGCGTAGAATTAACGAACAAAAAGAAAGAAGAAAATAAACGGAAGTAAATAAATGATGAATGATTCAGAAGCTTCCGACCGGTCGAGCTGAGGGAGGAGGATAATGCTATGGCGTCCCTGAATGTCACCACCGCTTTTTTATCACTCCGGCAGCCGGAATTCCCCTCCGACAGTGTGAATCGCCGATGCCTCATCGGAAATTTCCCTAATTGGAAACCGACCAGGCCGCTCTCCGTCGCTGCAAATTCTTCGGAGCCATTGCTGTCGACTCCTGCCGAAAAGCCTGAGATCGAGCTCGAATTTATTGGGGTAACTTCGCGTGGAAGAATTCGTTATCGGTAATTTGAGTTTAGTTCAGTGGATTTTGTTGTTTGGTGACCGTTTGATGTTTGTGGTTCTTTCACTTTGGTTCGAACAGCCGAAGCCGGGAAACGATGGATCGTTTCCGGTGGACAACGTCAAGGCGATAAGCGGCGAGAAGCTGTTGAGGAATATTATGCTGGATAACAAAATTGAGTTGTACGCCCCCTATGTAAGTTTTGATTTCTGCACTATATGGAGTGTGTTGTGAATTTTAATTTATTATTGAACCGATTCGTGTGTTGCCCTAACACTGCAAAGATTTAGCCATCGCAAGGAGTACACTGGTTCATTAATGTCATTGTCATCAACTTCTAGTGATGTAAGAGTAATGTGAACTGTGAAGGAAAGCATGATATGCAATGATCATAGAGTTTTTCTATGACGGTATTGGATAATGATGACTGGTTCTTGAAACCTTTTAGATGAATTTGTGCTGATATTGGAATACCATATTTGGGAGGACGCCTTAGTCTGTCTGATCATCGTGTCTCAGTTAAACCATGTTATAAACCCTGGAATTTACAATTCAGTCTTTAATAAACAATTTCGATAAAGTTTACAAAGTTCTATCCAGTAAGGCCTAAAGACTGGAGTAATCACTCAAACTAAGGCATGTTTATTAACCATTTGGTTAATAGAATTTGCTTTTTGAAAATTAAGCTTAAAAATACTACTTCCACTAGTAGGGTGTTTGCCATACACACTTTGATGCTTAAGTCAACGAGTGAAAGAGTGTGGAGCTAAGGAGTTTGAGAAGAGGATCCAAGTTACTTGTGTGGGAGTTACAATGATTATTTATAGAGGGGGTTGACCTAGGCCTTCTTCTGTTTCATTTCTTGTCGCCTTCCAGTGTTCAGTTAATTGATAATCTAATAAGATTGTATTGGATTGGGGGCGTGTCCATATGCTGATTGGGCTCCTTGACCTAGGGAGGGGGTCGGCTTTGGAGGTTGAGGGGTGGGTTGGCCCACCAAAGCCCCAACTCCTTTCCCTTGGCTCAATTAGTCTTGTCTTGGCCTCGGTCCAACTTTCTTTTTTCCCTTATTAAGATTTATTCTATTGGTCCAAAATTACTCATAACAATTTGGTTTTTGAAAATTAAGCTTAAAATACTACTTCCACCATAGTTTGTTTTGTTATTTACTTTCAAAAAACACTTTAAGATCCATGTTAACGTGCATTTTTTTTTTTTTTTATAAAAAAAATTGGTTAAGAACTCAAATGTTTCTTAATAAGTGTAAAATCAAAGTAAAGAAACTATGAGGAAAAAAACAAAATGAAATTGTTATCAAACGGAACTTGCATAATTCATTGTTTTGATGATTAATCAATGATTGCCAAAGTATTGGTAAAATGTTACCTATAGCATAACCTATCAACTTAAGTTTAACATGTTATAAGAAGCAAGAGATCCCTAGGTATGAATGCATGTGGTTACATGTTATAAGAAGCAAGAGATCCCAAGGTATGAATGCATGTGGTTTCATTTCTTATCTTGTGCAAATTTCTAAGCCCACTGACCGTAGGAGTATTCAATAATTAATAAAAGTTGAGTTTGGTAGCCATTGAACAATGAAAATAATCTTATGCTTTGATTACTCGATCATTCTCGCCTGTGTTTTCTTGCATGATGAGTCATTGAAATGCATCCAAATGTTCTCAGGGAAAATTGATGAACTGTGGTGGTGGTGGAAGTTGCGGGACCTGTATTGTCGAGGTAGTTTCCTGGCATACCCTTGTTGTTAGAGCTCCAGTACTTTTGCTCTGACCATTGCCTTTTCTGCTAGCCTACTGGTGAAATAACATAATGAAATTGCCTCCTTTGAGGTTGGAGGTCAGATTGTGGTCTGCTTCTTCTGGACGAAGCAGAACAAATGCACGCAGCATGGCAAAGTTGTAAATAATCGAGATAGAAAACTGGAGAGTAGAGAGTTCACTCATAGGCTAAAAAACTGGATTTTTCTGATTGCAAAACAGTGGGAAAAGATGCCGTTTCTTGATACTGTTTTTTGGTTCAATCATACAAATCTTTGCCTTTTAAGTTCCTGTTTGGTAACCATTTGATTTTTTGTTTTTAGTTTTAGAAAATTCCTGTAAACACTCTTTTCACCCTAAATTTCTTGCATTGTTATCTACTTTTTACCAATGTTTTCAAAATCAAGTCAAGTTTTGAAAACTAGAAAGAAGTTATTTTTGTTTTTTAAGGCTAAAAATTTAACTCTTTTACTAAAGAAAGGTGGAAAACATTGTAAGAAATTGAGACTAAATAAACTTAACTTTCAAGAACCAAATGGTTACCAAACAGGTTTAAATAATTTATTCATTTTTCATCACTGCATCACATGTCTTGTTGAGTACAGATTATAGGTAGAGGAAAATGTAAAGCAGAGGAGAGAGATGTGCATATCTTTTCTTGTTGATACAAAGAAATGGATATATGATGAGGGTCTCTACATCTTTGTGCAGATAATTGATGGGAAGGATCTATTGAATGAGAGAACAAATACTGAACTCCGTTACCTGAAGAAGGTAGGACAGTAATTGAGACTTATCTCTGTTTCTCAGCCTCTTTTGTTCTTCTAAAAATTTTTTATTCACCGTGGGAACCCATATTGTGTTATTAGCTATGAACTAGATTATAATATAGGCCAAGATGAGCATAACTCAATGGTAATTGCCATGTACTCCTCTCTTTAAAATTGGAGGTTCAACTCTTCACACTCTATATTTGTTGTACTAAAAAAGAAAGTTCCTAGTATAGACCTTTTCTCTACCTGTCTATGTATTGTGTTAATCTCCTTGAAGGTCCAATGAGAAAACATTTTATCCCCAAAACTGCATGTGTAGGGCCAAGTTATGATGGGTTCTATCATAACTTCACCACTGTTTCTCTATTGTTAGCCCAAACAAAATCTTAGTCCAGGTAAACAGGCATTAAGGCATTGTTTGAACAGTTCATTTAATTTTAATCTAATAACTTCAACTTTCTGAAATAATGTTGGGAGCCTGATTTCTTTTTCCATGTTTCTTAAAGTTTTTCATCCATCATTTTTCGCATTGAGCAATATTAACTTCGGTCGTAACAATTCAGAAACCCGAAAGTTGGAGGCTTGCTTGTCAGACAATTGTTGGCAATAAAGAGAACTCTGGCAAGGTACTGCCAAGAACCCATCATTTTAGTACCTATTTGCTTCTTTGTTCAGTTCTACATGGCAATCCTTCTATCATTGTATTGAAAATATAAGATCCATGATAGCCCTAGATGTCCTCAACATGATTAGCCTGCCTTTTGATTAAAGGCAAGCTCTCTGGCACATGGCAAAGCCAATTTTGATATGGTGGGACAAATTTTTACTTCAACCTTTTAATACTCATATATATATATATATATATAGGCTAAATTACAATAAATACTATAAACTTTGTCGTTTAAAAAATACTCTTATTCTTTCAAGAGTTACAATATTACATAACTTGTCATAAACTCTTCAAAATCAACCACCTTGAAGTAGAAATCTCTTAGAATGTTGAACAAAAATTGATACTTAGTTGGAATAATGTGGCAGTGACCTGAAATGGTGTGGTAGCAATCTCAATTTCCATTCCAGGTCACACCACACCATTCTAGGTCGTAACTTTCACTCAGTATTCTTACAGATTTCTACTACAAGGCACATCTACATAAGATCAAAGGTAATTTTATAACTTTTAAATGTTTATAGGGGTATTTTTGAAAGAAAGGGCAAAATTATAGAATCTCAATTTATGTAAGGATTTGAAGCTAAGATAAACTAGGGACAACAAACAATTGTCTTTCTCCTTCTTCTTTCTGTCCTTGCTCTAGTGTCCCTTCCTTCCATTAATATAGGTGGACCATTGGTTACAGGTTGTGGTCCAAAGGTTGCCCCAATGGAAGAAGTGATTTAGAGTTTCATCTTTATGTAGAGGCTGTGATTTGTTGCAAAATCAAGAGATTATATTATCCTACACCAACCAAGACCTACCTTGAAAGCTGCTGCTCACAAACAGATTTGTAGCTCAACACTCAAATATTAGTTGTTCCATGTTTGTTCCTGCTTTACCTTTATCCTTTAGGTAAGTTGAAATTGTATATTTTGAGAAACATAGTCTGAAAAAAAGGAGAGGTCATTTAGATCAGGTCTTTTATAATTAGTCATACATATTGGCACGTATATTGTTTAGAAAGTTAGTCAACCTGAACATAGCTGAACTTAGTATAATTATATATTCTCGAGTTTCGACTAAGAGCTCAAATATTCGTCTCGAATAAGTGGTTTTGGATGGACAGGTGTGACCAATTGAATAAAAATAGCAACAGAGTTCACTAACACCAAGGAATTAGTCAAACATGAGTTGTATTTACTCGATGGGGAGAGGTTAGCATAGGAGACAGGGAAAGGAAAGGTGAAGAAAATGCCAAAAAAAGAGTTGTTTTATTTATTTATTAATTATTATTTTTTAAAATATTGTGCCAATAAAAGTTGCATATTTACAATTTATTCTGGGAATC

mRNA sequence

ATGCTAGACTTCTATTATTTGAGAGATAGAAGTCAATCAAGCTTCCGACCGGTCGAGCTGAGGGAGGAGGATAATGCTATGGCGTCCCTGAATGTCACCACCGCTTTTTTATCACTCCGGCAGCCGGAATTCCCCTCCGACAGTGTGAATCGCCGATGCCTCATCGGAAATTTCCCTAATTGGAAACCGACCAGGCCGCTCTCCGTCGCTGCAAATTCTTCGGAGCCATTGCTGTCGACTCCTGCCGAAAAGCCTGAGATCGAGCTCGAATTTATTGGGTGGATTTTGTTGTTTGGTGACCGTTTGATGTTTGTGGTTCTTTCACTTTGGTTCGAACAGCCGAAGCCGGGAAACGATGGATCGTTTCCGGTGGACAACGTCAAGGCGATAAGCGGCGAGAAGCTGTTGAGGAATATTATGCTGGATAACAAAATTGAGTTGTACGCCCCCTATGGAAAATTGATGAACTGTGGTGGTGGTGGAAGTTGCGGGACCTGTATTGTCGAGGTAGTTTCCTGGCATACCCTTGTTGTTAGAGCTCCAGTTGGAGGTCAGATTGTGGTCTGCTTCTTCTGGACGAAGCAGAACAAATGCACGCAGCATGGCAAAGTTAAATGGATATATGATGAGGGTCTCTACATCTTTGTGCAGATAATTGATGGGAAGGATCTATTGAATGAGAGAACAAATACTGAACTCCGTTACCTGAAGAAGAAACCCGAAAGTTGGAGGCTTGCTTGTCAGACAATTGTTGGCAATAAAGAGAACTCTGGCAAGTTCTACATGGCAATCCTTCTATCATTGTTGTGGTCCAAAGGTTGCCCCAATGGAAGAAGTGATTTAGAGTTTCATCTTTATGTAGAGGCTGTGATTTGTTGCAAAATCAAGAGATTATATTATCCTACACCAACCAAGACCTACCTTGAAAGCTGCTGCTCACAAACAGATTTGTAGCTCAACACTCAAATATTAGTTGTTCCATGTTTGTTCCTGCTTTACCTTTATCCTTTAGGTAAGTTGAAATTGTATATTTTGAGAAACATAGTCTGAAAAAAAGGAGAGGTCATTTAGATCAGGTCTTTTATAATTAGTCATACATATTGGCACGTATATTGTTTAGAAAGTTAGTCAACCTGAACATAGCTGAACTTAGTATAATTATATATTCTCGAGTTTCGACTAAGAGCTCAAATATTCGTCTCGAATAAGTGGTTTTGGATGGACAGGTGTGACCAATTGAATAAAAATAGCAACAGAGTTCACTAACACCAAGGAATTAGTCAAACATGAGTTGTATTTACTCGATGGGGAGAGGTTAGCATAGGAGACAGGGAAAGGAAAGGTGAAGAAAATGCCAAAAAAAGAGTTGTTTTATTTATTTATTAATTATTATTTTTTAAAATATTGTGCCAATAAAAGTTGCATATTTACAATTTATTCTGGGAATC

Coding sequence (CDS)

ATGCTAGACTTCTATTATTTGAGAGATAGAAGTCAATCAAGCTTCCGACCGGTCGAGCTGAGGGAGGAGGATAATGCTATGGCGTCCCTGAATGTCACCACCGCTTTTTTATCACTCCGGCAGCCGGAATTCCCCTCCGACAGTGTGAATCGCCGATGCCTCATCGGAAATTTCCCTAATTGGAAACCGACCAGGCCGCTCTCCGTCGCTGCAAATTCTTCGGAGCCATTGCTGTCGACTCCTGCCGAAAAGCCTGAGATCGAGCTCGAATTTATTGGGTGGATTTTGTTGTTTGGTGACCGTTTGATGTTTGTGGTTCTTTCACTTTGGTTCGAACAGCCGAAGCCGGGAAACGATGGATCGTTTCCGGTGGACAACGTCAAGGCGATAAGCGGCGAGAAGCTGTTGAGGAATATTATGCTGGATAACAAAATTGAGTTGTACGCCCCCTATGGAAAATTGATGAACTGTGGTGGTGGTGGAAGTTGCGGGACCTGTATTGTCGAGGTAGTTTCCTGGCATACCCTTGTTGTTAGAGCTCCAGTTGGAGGTCAGATTGTGGTCTGCTTCTTCTGGACGAAGCAGAACAAATGCACGCAGCATGGCAAAGTTAAATGGATATATGATGAGGGTCTCTACATCTTTGTGCAGATAATTGATGGGAAGGATCTATTGAATGAGAGAACAAATACTGAACTCCGTTACCTGAAGAAGAAACCCGAAAGTTGGAGGCTTGCTTGTCAGACAATTGTTGGCAATAAAGAGAACTCTGGCAAGTTCTACATGGCAATCCTTCTATCATTGTTGTGGTCCAAAGGTTGCCCCAATGGAAGAAGTGATTTAGAGTTTCATCTTTATGTAGAGGCTGTGATTTGTTGCAAAATCAAGAGATTATATTATCCTACACCAACCAAGACCTACCTTGAAAGCTGCTGCTCACAAACAGATTTGTAG

Protein sequence

MLDFYYLRDRSQSSFRPVELREEDNAMASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANSSEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWTKQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKFYMAILLSLLWSKGCPNGRSDLEFHLYVEAVICCKIKRLYYPTPTKTYLESCCSQTDL

Homology

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BLAST of CmUC08G154830 vs. NCBI nr
Match: KAG7020358.1 (Photosynthetic NDH subunit of subcomplex B 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.2 bits (770), Expect = 1.0e-77
Identity = 167/262 (63.74%), Postives = 175/262 (66.79%), Query Frame = 0


Query: 14  SFRPVELREEDNAMASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANS 73
           +FR VEL+EEDNAMASLNVTT  LSLR  EFPS S NRRC IGNF N KP  PLSVA+NS
Sbjct: 4   NFRLVELKEEDNAMASLNVTTTLLSLRPVEFPSGSANRRCFIGNFRNRKPMLPLSVASNS 63

Query: 74  SEPLLSTPAEKPEIELEFIG----------------WILLFGDRLMFVVLSLWFEQPKPG 133
           SEPL+S+P EKPEIELEF+G                 ILL  D LMFVV  LW +QPKPG
Sbjct: 64  SEPLISSPPEKPEIELEFLGVTTRNDFVIGNLSLVPLILLDYDCLMFVV--LWCKQPKPG 123

Query: 134 NDGSFPVDNVKAISGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVEVVSWHTLV 193
           +DGS PVD  KAISGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE        
Sbjct: 124 SDGSLPVDTAKAISGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE-------- 183

Query: 194 VRAPVGGQIVVCFFWTKQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRYLK 253
                                                   IIDGKDLLNERTNTELRYLK
Sbjct: 184 ----------------------------------------IIDGKDLLNERTNTELRYLK 215

Query: 254 KKPESWRLACQTIVGNKENSGK 260
           KKPESWRLACQTIVGNKENSGK
Sbjct: 244 KKPESWRLACQTIVGNKENSGK 215

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BLAST of CmUC08G154830 vs. NCBI nr
Match: XP_038884161.1 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 292.7 bits (748), Expect = 3.7e-75
Identity = 156/233 (66.95%), Postives = 160/233 (68.67%), Query Frame = 0


Query: 27  MASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANSSEPLLSTPAEKPE 86
           MASLNVTTAFLSLRQPEFPSD+VNRRCLIGNFPN +PTRPLS+AANSSEP LSTPAEKPE
Sbjct: 1   MASLNVTTAFLSLRQPEFPSDNVNRRCLIGNFPNRRPTRPLSIAANSSEPFLSTPAEKPE 60

Query: 87  IELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGEKLLRNIMLDNKIE 146
           IELEFIG                    PKPG+DGSFPVD  KAISGEKLLRNIMLD KIE
Sbjct: 61  IELEFIG--------------------PKPGSDGSFPVDKAKAISGEKLLRNIMLDKKIE 120

Query: 147 LYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWTKQNKCTQHGKVKW 206
           LYAPYGKLMNCGGGGSCGTCIVE                                     
Sbjct: 121 LYAPYGKLMNCGGGGSCGTCIVE------------------------------------- 165

Query: 207 IYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 260
                      IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK
Sbjct: 181 -----------IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 165

[Close]

BLAST of CmUC08G154830 vs. NCBI nr
Match: XP_038884162.1 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 292.7 bits (748), Expect = 3.7e-75
Identity = 156/233 (66.95%), Postives = 160/233 (68.67%), Query Frame = 0


Query: 27  MASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANSSEPLLSTPAEKPE 86
           MASLNVTTAFLSLRQPEFPSD+VNRRCLIGNFPN +PTRPLS+AANSSEP LSTPAEKPE
Sbjct: 1   MASLNVTTAFLSLRQPEFPSDNVNRRCLIGNFPNRRPTRPLSIAANSSEPFLSTPAEKPE 60

Query: 87  IELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGEKLLRNIMLDNKIE 146
           IELEFIG                    PKPG+DGSFPVD  KAISGEKLLRNIMLD KIE
Sbjct: 61  IELEFIG--------------------PKPGSDGSFPVDKAKAISGEKLLRNIMLDKKIE 120

Query: 147 LYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWTKQNKCTQHGKVKW 206
           LYAPYGKLMNCGGGGSCGTCIVE                                     
Sbjct: 121 LYAPYGKLMNCGGGGSCGTCIVE------------------------------------- 165

Query: 207 IYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 260
                      IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK
Sbjct: 181 -----------IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 165

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BLAST of CmUC08G154830 vs. NCBI nr
Match: XP_008445133.1 (PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis melo])

HSP 1 Score: 292.0 bits (746), Expect = 6.3e-75
Identity = 157/233 (67.38%), Postives = 161/233 (69.10%), Query Frame = 0


Query: 27  MASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANSSEPLLSTPAEKPE 86
           M+SLNVTTAFLSLRQPEF SD VNRRCLIGNFPN KPTRPLSVAANSSEPLLSTPAEKPE
Sbjct: 1   MSSLNVTTAFLSLRQPEFFSDKVNRRCLIGNFPNRKPTRPLSVAANSSEPLLSTPAEKPE 60

Query: 87  IELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGEKLLRNIMLDNKIE 146
           IELEFIG                    PKPG+DGSFPVD VKAISG+KLLRNIMLDNKIE
Sbjct: 61  IELEFIG--------------------PKPGSDGSFPVDTVKAISGDKLLRNIMLDNKIE 120

Query: 147 LYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWTKQNKCTQHGKVKW 206
           LYAPYGKLMNCGGGGSCGTCIVE                                     
Sbjct: 121 LYAPYGKLMNCGGGGSCGTCIVE------------------------------------- 165

Query: 207 IYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 260
                      I+DGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK
Sbjct: 181 -----------ILDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 165

[Close]

BLAST of CmUC08G154830 vs. NCBI nr
Match: XP_023536929.1 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023536930.1 photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023536932.1 photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-74
Identity = 156/246 (63.41%), Postives = 163/246 (66.26%), Query Frame = 0


Query: 14  SFRPVELREEDNAMASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANS 73
           +FR VEL+EEDNAMASLNVTT  L LR  EFPS S NRRC IGNFPN KPT PLSVA+NS
Sbjct: 4   NFRLVELKEEDNAMASLNVTTTLLPLRPVEFPSGSANRRCFIGNFPNRKPTLPLSVASNS 63

Query: 74  SEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGE 133
           SEPL+S+P EKPEIELEF+G                    PKPG+DGS PVD  KAISGE
Sbjct: 64  SEPLISSPPEKPEIELEFLG--------------------PKPGSDGSLPVDTAKAISGE 123

Query: 134 KLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWT 193
           KLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE                        
Sbjct: 124 KLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE------------------------ 181

Query: 194 KQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN 253
                                   IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN
Sbjct: 184 ------------------------IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN 181

Query: 254 KENSGK 260
           KENSGK
Sbjct: 244 KENSGK 181

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BLAST of CmUC08G154830 vs. ExPASy Swiss-Prot
Match: Q9LU21 (Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB3 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.3e-18
Identity = 66/203 (32.51%), Postives = 88/203 (43.35%), Query Frame = 0


Query: 57  NFPNWKPTRPLSVAANSSEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKP 116
           N    K  R +S A  S  P    P E P ++  F+  +LL                   
Sbjct: 40  NAARTKTVRAISTAPASQPPAADEPDEPPAVDFAFVHSVLL------------------- 99

Query: 117 GNDGSFPVDNVKAISGEKLLRNIMLDNKIELYAPYGK-LMNCGGGGSCGTCIVEVVSWHT 176
             DG+  V   +A  G+K LR+IMLD+ IELY PY K L NC G G+C TC+VE      
Sbjct: 100 -PDGTPDVHWRRANGGQK-LRDIMLDSNIELYGPYSKPLSNCAGVGTCATCMVE------ 159

Query: 177 LVVRAPVGGQIVVCFFWTKQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRY 236
                                                     I++GK+LLN RT+ E   
Sbjct: 160 ------------------------------------------IVNGKELLNPRTDIEKEK 173

Query: 237 LKKKPESWRLACQTIVGNKENSG 259
           LK+KP++WRLACQT VGN +++G
Sbjct: 220 LKRKPKNWRLACQTNVGNPDSTG 173

[Close]

BLAST of CmUC08G154830 vs. ExPASy TrEMBL
Match: A0A1S3BBH4 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488260 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 3.1e-75
Identity = 157/233 (67.38%), Postives = 161/233 (69.10%), Query Frame = 0


Query: 27  MASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANSSEPLLSTPAEKPE 86
           M+SLNVTTAFLSLRQPEF SD VNRRCLIGNFPN KPTRPLSVAANSSEPLLSTPAEKPE
Sbjct: 1   MSSLNVTTAFLSLRQPEFFSDKVNRRCLIGNFPNRKPTRPLSVAANSSEPLLSTPAEKPE 60

Query: 87  IELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGEKLLRNIMLDNKIE 146
           IELEFIG                    PKPG+DGSFPVD VKAISG+KLLRNIMLDNKIE
Sbjct: 61  IELEFIG--------------------PKPGSDGSFPVDTVKAISGDKLLRNIMLDNKIE 120

Query: 147 LYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWTKQNKCTQHGKVKW 206
           LYAPYGKLMNCGGGGSCGTCIVE                                     
Sbjct: 121 LYAPYGKLMNCGGGGSCGTCIVE------------------------------------- 165

Query: 207 IYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 260
                      I+DGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK
Sbjct: 181 -----------ILDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 165

[Close]

BLAST of CmUC08G154830 vs. ExPASy TrEMBL
Match: A0A6J1GHD4 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454210 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 2.6e-74
Identity = 156/246 (63.41%), Postives = 164/246 (66.67%), Query Frame = 0


Query: 14  SFRPVELREEDNAMASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANS 73
           +FR VEL+EEDNAMASLNVTT  LSLR  EFPS S NRRC IGNF N KPT PLSVA+NS
Sbjct: 4   NFRLVELKEEDNAMASLNVTTTLLSLRPVEFPSGSANRRCFIGNFRNRKPTLPLSVASNS 63

Query: 74  SEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGE 133
           SEPL+S+P EKPEIELEF+G                    PKPG+DGSFPV+  KAISGE
Sbjct: 64  SEPLISSPPEKPEIELEFLG--------------------PKPGSDGSFPVNTAKAISGE 123

Query: 134 KLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWT 193
           KLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE                        
Sbjct: 124 KLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE------------------------ 181

Query: 194 KQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN 253
                                   IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN
Sbjct: 184 ------------------------IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN 181

Query: 254 KENSGK 260
           KENSGK
Sbjct: 244 KENSGK 181

[Close]

BLAST of CmUC08G154830 vs. ExPASy TrEMBL
Match: A0A6J1KTR7 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111496328 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.4e-74
Identity = 156/246 (63.41%), Postives = 164/246 (66.67%), Query Frame = 0


Query: 14  SFRPVELREEDNAMASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANS 73
           +FR VEL+EEDNAMASLNVTT  LSLR  EFPS S NRRC IGNFPN K T PLSVA+NS
Sbjct: 4   NFRLVELKEEDNAMASLNVTTTLLSLRPLEFPSGSANRRCFIGNFPNRKWTLPLSVASNS 63

Query: 74  SEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGE 133
           SEPL+S+P +KPEIELEF+G                    PKPG+DGSFPVD  KAISGE
Sbjct: 64  SEPLISSPPDKPEIELEFLG--------------------PKPGSDGSFPVDTAKAISGE 123

Query: 134 KLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWT 193
           KLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE                        
Sbjct: 124 KLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE------------------------ 181

Query: 194 KQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN 253
                                   IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN
Sbjct: 184 ------------------------IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN 181

Query: 254 KENSGK 260
           KENSGK
Sbjct: 244 KENSGK 181

[Close]

BLAST of CmUC08G154830 vs. ExPASy TrEMBL
Match: A0A0A0LQ15 (2Fe-2S ferredoxin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G379280 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 4.4e-74
Identity = 154/233 (66.09%), Postives = 161/233 (69.10%), Query Frame = 0


Query: 27  MASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANSSEPLLSTPAEKPE 86
           M+SLNVTTAFLSLRQPEF SD+ NRRCLIGNFP+ KPTRPLSVAANSSEPLLSTPAEKPE
Sbjct: 1   MSSLNVTTAFLSLRQPEFFSDNANRRCLIGNFPSRKPTRPLSVAANSSEPLLSTPAEKPE 60

Query: 87  IELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGEKLLRNIMLDNKIE 146
           IELEFIG                    PKPG+DGSFPVD VKAISG+KLLRNIMLDNK+E
Sbjct: 61  IELEFIG--------------------PKPGSDGSFPVDTVKAISGDKLLRNIMLDNKLE 120

Query: 147 LYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWTKQNKCTQHGKVKW 206
           LYAPYGKLMNCGGGGSCGTCIVE                                     
Sbjct: 121 LYAPYGKLMNCGGGGSCGTCIVE------------------------------------- 165

Query: 207 IYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 260
                      I+DGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK
Sbjct: 181 -----------ILDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 165

[Close]

BLAST of CmUC08G154830 vs. ExPASy TrEMBL
Match: A0A6J1BTF3 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111004660 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 7.3e-69
Identity = 146/233 (62.66%), Postives = 154/233 (66.09%), Query Frame = 0


Query: 27  MASLNVTTAFLSLRQPEFPSDSVNRRCLIGNFPNWKPTRPLSVAANSSEPLLSTPAEKPE 86
           MASLNVTTA LSLRQPEF S S NRRC+IGNFPN +PT PLSVAANSSEPLLS+PAEKPE
Sbjct: 1   MASLNVTTASLSLRQPEFRSGSGNRRCIIGNFPNRRPTVPLSVAANSSEPLLSSPAEKPE 60

Query: 87  IELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNVKAISGEKLLRNIMLDNKIE 146
           IELEF+G                    P PG+DGS+PVD  KA+SGEKLLRNIMLDNKIE
Sbjct: 61  IELEFLG--------------------PNPGSDGSYPVDTAKAVSGEKLLRNIMLDNKIE 120

Query: 147 LYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIVVCFFWTKQNKCTQHGKVKW 206
           LYAPYGKLMNCGGGGSCGTCIVE                                     
Sbjct: 121 LYAPYGKLMNCGGGGSCGTCIVE------------------------------------- 165

Query: 207 IYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 260
                      IIDG  LLNERTNTELRYLKKKPE+WRLACQTIVGNKENSGK
Sbjct: 181 -----------IIDGNGLLNERTNTELRYLKKKPETWRLACQTIVGNKENSGK 165

[Close]

BLAST of CmUC08G154830 vs. TAIR 10
Match: AT4G32590.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 167.2 bits (422), Expect = 2.2e-41
Identity = 94/192 (48.96%), Postives = 107/192 (55.73%), Query Frame = 0


Query: 68  SVAANSSEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNV 127
           S ++ +S P   +     EIELEF G                    PKPG+DGS+PVD  
Sbjct: 39  SSSSQASSPQGISAVTPLEIELEFFG--------------------PKPGSDGSYPVDKA 98

Query: 128 KAISGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIV 187
           KA+SG+KLLR+IM DNKIELYA YGK+MNCGGGGSCGTCIVE                  
Sbjct: 99  KAVSGDKLLRSIMQDNKIELYAAYGKVMNCGGGGSCGTCIVE------------------ 158

Query: 188 VCFFWTKQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLAC 247
                                         I+DG+DLLNERT+TE RYLKKKPESWRLAC
Sbjct: 159 ------------------------------ILDGRDLLNERTDTENRYLKKKPESWRLAC 162

Query: 248 QTIVGNKENSGK 260
           QTIVGNKENSGK
Sbjct: 219 QTIVGNKENSGK 162

[Close]

BLAST of CmUC08G154830 vs. TAIR 10
Match: AT4G32590.3 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 167.2 bits (422), Expect = 2.2e-41
Identity = 94/192 (48.96%), Postives = 107/192 (55.73%), Query Frame = 0


Query: 68  SVAANSSEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNV 127
           S ++ +S P   +     EIELEF G                    PKPG+DGS+PVD  
Sbjct: 39  SSSSQASSPQGISAVTPLEIELEFFG--------------------PKPGSDGSYPVDKA 98

Query: 128 KAISGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIV 187
           KA+SG+KLLR+IM DNKIELYA YGK+MNCGGGGSCGTCIVE                  
Sbjct: 99  KAVSGDKLLRSIMQDNKIELYAAYGKVMNCGGGGSCGTCIVE------------------ 158

Query: 188 VCFFWTKQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRYLKKKPESWRLAC 247
                                         I+DG+DLLNERT+TE RYLKKKPESWRLAC
Sbjct: 159 ------------------------------ILDGRDLLNERTDTENRYLKKKPESWRLAC 162

Query: 248 QTIVGNKENSGK 260
           QTIVGNKENSGK
Sbjct: 219 QTIVGNKENSGK 162

[Close]

BLAST of CmUC08G154830 vs. TAIR 10
Match: AT4G32590.4 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 8.1e-28
Identity = 73/171 (42.69%), Postives = 86/171 (50.29%), Query Frame = 0


Query: 68  SVAANSSEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNV 127
           S ++ +S P   +     EIELEF G                    PKPG+DGS+PVD  
Sbjct: 39  SSSSQASSPQGISAVTPLEIELEFFG--------------------PKPGSDGSYPVDKA 98

Query: 128 KAISGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVEVVSWHTLVVRAPVGGQIV 187
           KA+SG+KLLR+IM DNKIELYA YGK+MNCGGGGSCGTCIVE                  
Sbjct: 99  KAVSGDKLLRSIMQDNKIELYAAYGKVMNCGGGGSCGTCIVE------------------ 141

Query: 188 VCFFWTKQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRYLKK 239
                                         I+DG+DLLNERT+TE RYLKK
Sbjct: 159 ------------------------------ILDGRDLLNERTDTENRYLKK 141

[Close]

BLAST of CmUC08G154830 vs. TAIR 10
Match: AT4G32590.2 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 3.2e-24
Identity = 56/102 (54.90%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 68  SVAANSSEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKPGNDGSFPVDNV 127
           S ++ +S P   +     EIELEF G                    PKPG+DGS+PVD  
Sbjct: 39  SSSSQASSPQGISAVTPLEIELEFFG--------------------PKPGSDGSYPVDKA 98

Query: 128 KAISGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE 170
           KA+SG+KLLR+IM DNKIELYA YGK+MNCGGGGSCGTCIVE
Sbjct: 99  KAVSGDKLLRSIMQDNKIELYAAYGKVMNCGGGGSCGTCIVE 120

[Close]

BLAST of CmUC08G154830 vs. TAIR 10
Match: AT3G16250.1 (NDH-dependent cyclic electron flow 1 )

HSP 1 Score: 94.0 bits (232), Expect = 2.4e-19
Identity = 66/203 (32.51%), Postives = 88/203 (43.35%), Query Frame = 0


Query: 57  NFPNWKPTRPLSVAANSSEPLLSTPAEKPEIELEFIGWILLFGDRLMFVVLSLWFEQPKP 116
           N    K  R +S A  S  P    P E P ++  F+  +LL                   
Sbjct: 40  NAARTKTVRAISTAPASQPPAADEPDEPPAVDFAFVHSVLL------------------- 99

Query: 117 GNDGSFPVDNVKAISGEKLLRNIMLDNKIELYAPYGK-LMNCGGGGSCGTCIVEVVSWHT 176
             DG+  V   +A  G+K LR+IMLD+ IELY PY K L NC G G+C TC+VE      
Sbjct: 100 -PDGTPDVHWRRANGGQK-LRDIMLDSNIELYGPYSKPLSNCAGVGTCATCMVE------ 159

Query: 177 LVVRAPVGGQIVVCFFWTKQNKCTQHGKVKWIYDEGLYIFVQIIDGKDLLNERTNTELRY 236
                                                     I++GK+LLN RT+ E   
Sbjct: 160 ------------------------------------------IVNGKELLNPRTDIEKEK 173

Query: 237 LKKKPESWRLACQTIVGNKENSG 259
           LK+KP++WRLACQT VGN +++G
Sbjct: 220 LKRKPKNWRLACQTNVGNPDSTG 173

The following BLAST results are available for this feature:

BLAST of CmUC08G154830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020358.1	1.0e-77	63.74	Photosynthetic NDH subunit of subcomplex B 3, chloroplastic, partial [Cucurbita ...	[more]
XP_038884161.1	3.7e-75	66.95	photosynthetic NDH subunit of subcomplex B 3, chloroplastic isoform X1 [Benincas...	[more]
XP_038884162.1	3.7e-75	66.95	photosynthetic NDH subunit of subcomplex B 3, chloroplastic isoform X2 [Benincas...	[more]
XP_008445133.1	6.3e-75	67.38	PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis ...	[more]
XP_023536929.1	2.4e-74	63.41	photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like [Cucurbita pepo...	[more]

BLAST of CmUC08G154830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU21	3.3e-18	32.51	Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of CmUC08G154830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBH4	3.1e-75	67.38	photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Cucumis melo OX=3...	[more]
A0A6J1GHD4	2.6e-74	63.41	photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Cucurbita moschat...	[more]
A0A6J1KTR7	3.4e-74	63.41	photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Cucurbita maxima ...	[more]
A0A0A0LQ15	4.4e-74	66.09	2Fe-2S ferredoxin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A6J1BTF3	7.3e-69	62.66	photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Momordica charant...	[more]

BLAST of CmUC08G154830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32590.1	2.2e-41	48.96	2Fe-2S ferredoxin-like superfamily protein	[more]
AT4G32590.3	2.2e-41	48.96	2Fe-2S ferredoxin-like superfamily protein	[more]
AT4G32590.4	8.1e-28	42.69	2Fe-2S ferredoxin-like superfamily protein	[more]
AT4G32590.2	3.2e-24	54.90	2Fe-2S ferredoxin-like superfamily protein	[more]
AT3G16250.1	2.4e-19	32.51	NDH-dependent cyclic electron flow 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 154..172 e-value: 5.7E-4 score: 19.8
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 123..262 e-value: 5.3E-13 score: 50.6
None	No IPR available	PANTHER	PTHR23426	FERREDOXIN/ADRENODOXIN	coord: 111..173 coord: 215..260
None	No IPR available	PANTHER	PTHR23426:SF27	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTIC	coord: 111..173 coord: 215..260
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 134..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G154830.1	CmUC08G154830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051536	iron-sulfur cluster binding