CmUC08G154530 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTATTTGTTTCCATAATTTGGATAAAACTTGTCCAAAACTTTCCATTTTTGTTTAAAAAGAAAAACAAAAACAAAAAATCAGTTGCTTCCTTTTTCGCAGCTCTTTCTTTTATGGATCGAATTTTCCTCTTCCAATCTGTTCATCTCCTTCTCTCTGTTAAGGCCATCACTTTCTCCTTCTACCCACCTTTTCATGACAACTCAGCTTCAACCGGCGACCCCTAGAAGAACCCCTCTCCGCCACTTCCTCCGCCGTCCGATTCTCACTCTTCGCGATCATGGAGGTTCTCTTCCCTCCTCCCTCTTTCACCATTCAGGTCGCCTCTTCTTCCTCTTTCGTCAGAGATCGGACCGCCGCTTCTCCTCCTCCTCCCCCGCCGCCGCCGGAGCATCACGTTGATTCGCCTTGGAACTCTTTCAAATCCGATTTCAGAACTTTCGCCTCCGGTAAAGCTCCGGAGGATGAAATCGATTACCGTTCTGATTCCTCCTCGTCGATCGGAGTTCCTGATGATAGCGATGACGAGAGCGTTTCATCCACTGGTGGAGATCGTGAGGAAGTTCAGAGTAAATCAAATGCAGGATTCGTTTCTCTTGGATCGTTGGAAGAGTCTCTTCCGATCAAGTAAGTTAGTTATCTTGTTCCTAACTTTTGTGTTTATCTGTTGTTTAATCCAGTAATTGATGGAGATAAACTCAATCAGTCGATTCGATTAGACAAATGTTTAAAGAAATTGTGTTTATATTCAATCTGCTGGTCTTAATTTGAGGTTCGGTGAAATTTTAAATCAGGAGAGGGTTATCGAGTCATTTTTCTGGAAAATCGAAATCGTTTGTGAATCTAGCAGAGGCGAAATCAGTTAAAGATATTGAGAAACCTGAAAATTCATTCAATAAGAGGAGACGAGTTTTGATTGCGTCGAAATTGGCTAAGAAATCGTCGTTCTACACCTGGCCAACCCCTAAGTCGATGACCCTGTTACCGCTGGGAGAAGAAGACGACGACGACGACGAAGAAGAAGAAGAAGAAGAAGAAGAATCACATGCTCCATATTCTTCCGATGAAGACGAAGAACCGATAGGAAAAAGAGTAACAGATTTTCATGAGAGAAGGTTGATGAGCTTCAAGTCGAGAAGCTTGTCTATTGCTGATCTGCAACAGCAGCACCGTGGTATTGATAATTTGATCGACAACAAGGACAATAATCCATAGCCTTTACCCTTCTTTCTATTTTTTTTTTTCTTTCTTTCTATTTTTGGTTATTTGTTTCTTCTCCTTCCCTTTCTTTTTTCAATTTCATTTTATTTTCTCTTAATATCTATTGTGTACACACTTATCCATCATAAATAAAATATTAAAGTTTTAATTTTACCAAAATTTCCATACAAATATGGTTGAAATGTATAAATATTTCTAG AGTATTTGTTTCCATAATTTGGATAAAACTTGTCCAAAACTTTCCATTTTTGTTTAAAAAGAAAAACAAAAACAAAAAATCAGTTGCTTCCTTTTTCGCAGCTCTTTCTTTTATGGATCGAATTTTCCTCTTCCAATCTGTTCATCTCCTTCTCTCTGTTAAGGCCATCACTTTCTCCTTCTACCCACCTTTTCATGACAACTCAGCTTCAACCGGCGACCCCTAGAAGAACCCCTCTCCGCCACTTCCTCCGCCGTCCGATTCTCACTCTTCGCGATCATGGAGGTTCTCTTCCCTCCTCCCTCTTTCACCATTCAGGTCGCCTCTTCTTCCTCTTTCGTCAGAGATCGGACCGCCGCTTCTCCTCCTCCTCCCCCGCCGCCGCCGGAGCATCACGTTGATTCGCCTTGGAACTCTTTCAAATCCGATTTCAGAACTTTCGCCTCCGGTAAAGCTCCGGAGGATGAAATCGATTACCGTTCTGATTCCTCCTCGTCGATCGGAGTTCCTGATGATAGCGATGACGAGAGCGTTTCATCCACTGGTGGAGATCGTGAGGAAGTTCAGAGTAAATCAAATGCAGGATTCGTTTCTCTTGGATCGTTGGAAGAGTCTCTTCCGATCAAGAGAGGGTTATCGAGTCATTTTTCTGGAAAATCGAAATCGTTTGTGAATCTAGCAGAGGCGAAATCAGTTAAAGATATTGAGAAACCTGAAAATTCATTCAATAAGAGGAGACGAGTTTTGATTGCGTCGAAATTGGCTAAGAAATCGTCGTTCTACACCTGGCCAACCCCTAAGTCGATGACCCTGTTACCGCTGGGAGAAGAAGACGACGACGACGACGAAGAAGAAGAAGAAGAAGAAGAAGAATCACATGCTCCATATTCTTCCGATGAAGACGAAGAACCGATAGGAAAAAGAGTAACAGATTTTCATGAGAGAAGGTTGATGAGCTTCAAGTCGAGAAGCTTGTCTATTGCTGATCTGCAACAGCAGCACCGTGGTATTGATAATTTGATCGACAACAAGGACAATAATCCATAGCCTTTACCCTTCTTTCTATTTTTTTTTTTCTTTCTTTCTATTTTTGGTTATTTGTTTCTTCTCCTTCCCTTTCTTTTTTCAATTTCATTTTATTTTCTCTTAATATCTATTGTGTACACACTTATCCATCATAAATAAAATATTAAAGTTTTAATTTTACCAAAATTTCCATACAAATATGGTTGAAATGTATAAATATTTCTAG ATGGAGGTTCTCTTCCCTCCTCCCTCTTTCACCATTCAGGTCGCCTCTTCTTCCTCTTTCGTCAGAGATCGGACCGCCGCTTCTCCTCCTCCTCCCCCGCCGCCGCCGGAGCATCACGTTGATTCGCCTTGGAACTCTTTCAAATCCGATTTCAGAACTTTCGCCTCCGGTAAAGCTCCGGAGGATGAAATCGATTACCGTTCTGATTCCTCCTCGTCGATCGGAGTTCCTGATGATAGCGATGACGAGAGCGTTTCATCCACTGGTGGAGATCGTGAGGAAGTTCAGAGTAAATCAAATGCAGGATTCGTTTCTCTTGGATCGTTGGAAGAGTCTCTTCCGATCAAGAGAGGGTTATCGAGTCATTTTTCTGGAAAATCGAAATCGTTTGTGAATCTAGCAGAGGCGAAATCAGTTAAAGATATTGAGAAACCTGAAAATTCATTCAATAAGAGGAGACGAGTTTTGATTGCGTCGAAATTGGCTAAGAAATCGTCGTTCTACACCTGGCCAACCCCTAAGTCGATGACCCTGTTACCGCTGGGAGAAGAAGACGACGACGACGACGAAGAAGAAGAAGAAGAAGAAGAAGAATCACATGCTCCATATTCTTCCGATGAAGACGAAGAACCGATAGGAAAAAGAGTAACAGATTTTCATGAGAGAAGGTTGATGAGCTTCAAGTCGAGAAGCTTGTCTATTGCTGATCTGCAACAGCAGCACCGTGGTATTGATAATTTGATCGACAACAAGGACAATAATCCATAG MEVLFPPPSFTIQVASSSSFVRDRTAASPPPPPPPPEHHVDSPWNSFKSDFRTFASGKAPEDEIDYRSDSSSSIGVPDDSDDESVSSTGGDREEVQSKSNAGFVSLGSLEESLPIKRGLSSHFSGKSKSFVNLAEAKSVKDIEKPENSFNKRRRVLIASKLAKKSSFYTWPTPKSMTLLPLGEEDDDDDEEEEEEEEESHAPYSSDEDEEPIGKRVTDFHERRLMSFKSRSLSIADLQQQHRGIDNLIDNKDNNP Homology
BLAST of CmUC08G154530 vs. NCBI nr
Match: XP_038884123.1 (protein virilizer homolog [Benincasa hispida]) HSP 1 Score: 345.1 bits (884), Expect = 5.1e-91 Identity = 201/248 (81.05%), Postives = 211/248 (85.08%), Query Frame = 0
BLAST of CmUC08G154530 vs. NCBI nr
Match: XP_022997371.1 (uncharacterized protein LOC111492307 [Cucurbita maxima]) HSP 1 Score: 328.2 bits (840), Expect = 6.4e-86 Identity = 191/250 (76.40%), Postives = 205/250 (82.00%), Query Frame = 0
BLAST of CmUC08G154530 vs. NCBI nr
Match: XP_023546188.1 (uncharacterized protein LOC111805363 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 325.9 bits (834), Expect = 3.2e-85 Identity = 191/250 (76.40%), Postives = 205/250 (82.00%), Query Frame = 0
BLAST of CmUC08G154530 vs. NCBI nr
Match: XP_023537797.1 (uncharacterized protein LOC111798715 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 322.4 bits (825), Expect = 3.5e-84 Identity = 190/248 (76.61%), Postives = 209/248 (84.27%), Query Frame = 0
BLAST of CmUC08G154530 vs. NCBI nr
Match: KAG6585427.1 (hypothetical protein SDJN03_18160, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 322.0 bits (824), Expect = 4.6e-84 Identity = 190/248 (76.61%), Postives = 208/248 (83.87%), Query Frame = 0
BLAST of CmUC08G154530 vs. ExPASy TrEMBL
Match: A0A6J1K7A7 (uncharacterized protein LOC111492307 OS=Cucurbita maxima OX=3661 GN=LOC111492307 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 3.1e-86 Identity = 191/250 (76.40%), Postives = 205/250 (82.00%), Query Frame = 0
BLAST of CmUC08G154530 vs. ExPASy TrEMBL
Match: A0A6J1GJ08 (uncharacterized protein LOC111454311 OS=Cucurbita moschata OX=3662 GN=LOC111454311 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 3.8e-84 Identity = 190/248 (76.61%), Postives = 209/248 (84.27%), Query Frame = 0
BLAST of CmUC08G154530 vs. ExPASy TrEMBL
Match: A0A1S3BCK4 (protein ENL-like OS=Cucumis melo OX=3656 GN=LOC103488223 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.9e-83 Identity = 182/251 (72.51%), Postives = 202/251 (80.48%), Query Frame = 0
BLAST of CmUC08G154530 vs. ExPASy TrEMBL
Match: A0A6J1HC13 (uncharacterized protein LOC111462633 OS=Cucurbita moschata OX=3662 GN=LOC111462633 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 5.5e-83 Identity = 187/246 (76.02%), Postives = 200/246 (81.30%), Query Frame = 0
BLAST of CmUC08G154530 vs. ExPASy TrEMBL
Match: A0A6J1KP27 (uncharacterized protein LOC111496305 OS=Cucurbita maxima OX=3661 GN=LOC111496305 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 9.4e-83 Identity = 186/245 (75.92%), Postives = 205/245 (83.67%), Query Frame = 0
BLAST of CmUC08G154530 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 123.6 bits (309), Expect = 2.2e-28 Identity = 88/186 (47.31%), Postives = 122/186 (65.59%), Query Frame = 0
BLAST of CmUC08G154530 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 92.4 bits (228), Expect = 5.5e-19 Identity = 77/182 (42.31%), Postives = 104/182 (57.14%), Query Frame = 0
BLAST of CmUC08G154530 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 79.3 bits (194), Expect = 4.8e-15 Identity = 69/171 (40.35%), Postives = 105/171 (61.40%), Query Frame = 0
BLAST of CmUC08G154530 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 3.6e-10 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 0
BLAST of CmUC08G154530 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 6.1e-10 Identity = 47/134 (35.07%), Postives = 75/134 (55.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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