CmUC08G153900 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTCTAGGAAGTTGACAGTTGATGCAGATTTTTCTACAAGTGTTTTATGTGATCATTGGAATATAAAGGAAGAAAAATCTATTCTCTCTCATTCTCAATTTAGCGTATCGTGTTCAGAAGGTTCAACTAGTTCTATTGGATCAATATCGTCATCGAGCGTTTGTGACGACGACGCATTATCGTCATTCTCACCTTCTTCTTCTTTTTCTTCATTGTCTTTGTCCTCAACTTCATCTTTGTTATCTCAAAGTGAACTTCATGAGCAACAACTTCCTATCAAGTAAGTTAAAATGTAGAGCTAGAACCCCCAAATTTTCTTTATACTATTTCAGTTTCTAAGCTTTTAAGCCTTAAATTACTGGTATCTGAGCCGTTTGCTTGTTATGCAGAAAAGGGTTGTCAAAATTTTATGAAGGAAAATCACGAACCTTTTCATCATTATCAGACGTGAAATCCATAGAAGACTTAGCAAAGAAAGAGAAGAACTACAAAAAGAAAGACTCTCGAATTAGTCCTAAGGCTGCTATTTCAAAGAAGCATGGAAGGAGCTGTTTTGCAAACTTGGTGTCTAAGGCAGACACTTTACTTTGAGTTTAGATAATTCAACTAAATATATGACATGCTTCTTTGAATAAAGAGGTGGAGCTGTTTTTACAAATATACTCGATCTATGAGATGGTAATCAATATCTTGTTCATTGTGCTACGTTTGAATTAATGTTCTTATAAAATTTATTGTTTGATAAGGGTAAAATGATG ATGAAGTCTAGGAAGTTGACAGTTGATGCAGATTTTTCTACAAGTGTTTTATGTGATCATTGGAATATAAAGGAAGAAAAATCTATTCTCTCTCATTCTCAATTTAGCGTATCGTGTTCAGAAGGTTCAACTAGTTCTATTGGATCAATATCGTCATCGAGCGTTTGTGACGACGACGCATTATCGTCATTCTCACCTTCTTCTTCTTTTTCTTCATTGTCTTTGTCCTCAACTTCATCTTTGTTATCTCAAAGTGAACTTCATGAGCAACAACTTCCTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGAAAATCACGAACCTTTTCATCATTATCAGACGTGAAATCCATAGAAGACTTAGCAAAGAAAGAGAAGAACTACAAAAAGAAAGACTCTCGAATTAGTCCTAAGGCTGCTATTTCAAAGAAGCATGGAAGGAGCTGTTTTGCAAACTTGGTGTCTAAGGCAGACACTTTACTTTGAGTTTAGATAATTCAACTAAATATATGACATGCTTCTTTGAATAAAGAGGTGGAGCTGTTTTTACAAATATACTCGATCTATGAGATGGTAATCAATATCTTGTTCATTGTGCTACGTTTGAATTAATGTTCTTATAAAATTTATTGTTTGATAAGGGTAAAATGATG ATGAAGTCTAGGAAGTTGACAGTTGATGCAGATTTTTCTACAAGTGTTTTATGTGATCATTGGAATATAAAGGAAGAAAAATCTATTCTCTCTCATTCTCAATTTAGCGTATCGTGTTCAGAAGGTTCAACTAGTTCTATTGGATCAATATCGTCATCGAGCGTTTGTGACGACGACGCATTATCGTCATTCTCACCTTCTTCTTCTTTTTCTTCATTGTCTTTGTCCTCAACTTCATCTTTGTTATCTCAAAGTGAACTTCATGAGCAACAACTTCCTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGAAAATCACGAACCTTTTCATCATTATCAGACGTGAAATCCATAGAAGACTTAGCAAAGAAAGAGAAGAACTACAAAAAGAAAGACTCTCGAATTAGTCCTAAGGCTGCTATTTCAAAGAAGCATGGAAGGAGCTGTTTTGCAAACTTGGTGTCTAAGGCAGACACTTTACTTTGA MKSRKLTVDADFSTSVLCDHWNIKEEKSILSHSQFSVSCSEGSTSSIGSISSSSVCDDDALSSFSPSSSFSSLSLSSTSSLLSQSELHEQQLPIKKGLSKFYEGKSRTFSSLSDVKSIEDLAKKEKNYKKKDSRISPKAAISKKHGRSCFANLVSKADTLL Homology
BLAST of CmUC08G153900 vs. NCBI nr
Match: XP_031737345.1 (uncharacterized protein LOC105434656 [Cucumis sativus] >XP_031737346.1 uncharacterized protein LOC105434656 [Cucumis sativus] >KAE8652155.1 hypothetical protein Csa_022355 [Cucumis sativus]) HSP 1 Score: 235.3 bits (599), Expect = 3.6e-58 Identity = 136/161 (84.47%), Postives = 148/161 (91.93%), Query Frame = 0
BLAST of CmUC08G153900 vs. NCBI nr
Match: XP_008444987.1 (PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo] >XP_008444989.1 PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo] >XP_008444990.1 PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo]) HSP 1 Score: 230.7 bits (587), Expect = 8.8e-57 Identity = 134/161 (83.23%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of CmUC08G153900 vs. NCBI nr
Match: KAA0065056.1 (uncharacterized protein E6C27_scaffold82G003850 [Cucumis melo var. makuwa]) HSP 1 Score: 227.6 bits (579), Expect = 7.5e-56 Identity = 132/161 (81.99%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of CmUC08G153900 vs. NCBI nr
Match: XP_022961691.1 (uncharacterized protein LOC111462384 [Cucurbita moschata]) HSP 1 Score: 161.4 bits (407), Expect = 6.6e-36 Identity = 110/165 (66.67%), Postives = 125/165 (75.76%), Query Frame = 0
BLAST of CmUC08G153900 vs. NCBI nr
Match: XP_022996858.1 (uncharacterized protein LOC111491976 [Cucurbita maxima]) HSP 1 Score: 157.9 bits (398), Expect = 7.3e-35 Identity = 111/166 (66.87%), Postives = 125/166 (75.30%), Query Frame = 0
BLAST of CmUC08G153900 vs. ExPASy TrEMBL
Match: A0A1S3BBN3 (uncharacterized protein LOC103488165 OS=Cucumis melo OX=3656 GN=LOC103488165 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 4.3e-57 Identity = 134/161 (83.23%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of CmUC08G153900 vs. ExPASy TrEMBL
Match: A0A5A7VFF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003850 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.6e-56 Identity = 132/161 (81.99%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of CmUC08G153900 vs. ExPASy TrEMBL
Match: A0A6J1HB27 (uncharacterized protein LOC111462384 OS=Cucurbita moschata OX=3662 GN=LOC111462384 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 3.2e-36 Identity = 110/165 (66.67%), Postives = 125/165 (75.76%), Query Frame = 0
BLAST of CmUC08G153900 vs. ExPASy TrEMBL
Match: A0A6J1KC75 (uncharacterized protein LOC111491976 OS=Cucurbita maxima OX=3661 GN=LOC111491976 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 3.5e-35 Identity = 111/166 (66.87%), Postives = 125/166 (75.30%), Query Frame = 0
BLAST of CmUC08G153900 vs. ExPASy TrEMBL
Match: A0A0A0LLW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372880 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27 Identity = 80/95 (84.21%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of CmUC08G153900 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-09 Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 0
BLAST of CmUC08G153900 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.5e-06 Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of CmUC08G153900 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 7.1e-04 Identity = 46/143 (32.17%), Postives = 69/143 (48.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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