![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmUC08G152830 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCCCTTTCAACCCCACCCTTCTTCTCTAAATGACAATACATCAACAATTAGAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATCCCGACATCACCGTTGAGCTCCATATTCGATATCGAGCTCCACCTTGAAACTCCATTACCTTTTTACTGGCAAAGGTGTCTTGACATTCAGGTCTTTTCTTTTTTCCTATAAATATCCTTCTGTTGTATGTTTTATTTGTTAATTTATAAGCTTAAGGTTTTAGGTCAATTGACGATTTAACGTGGTACCAAAATAGAAGGTTTTGTGTTTAAACATCTAGCTAATGTCATTTTCTCTCCAATTATTATTGATTTCTATGAATTTTTAGGTGATTTAGTGAAATTTAACACTATTAACTTATATAAAGCAAAAGTTTTTAGATTTAGTGGTGATTTTTTCTTCTTTTTCATTTTCAGTCTGGAAAGATACACTTTTACAACACGACAACTCAAAAGAGAACATGGAAAGATCCGAGGGACAAGGTCGAGAAAGACGATGACGACAAGGAAGATGACCACAGCTACAACGGCGAGGATATCGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCGCTGGACAAGAACAACAATAATCAAACAATACAAGGCGGGCGTCGAGCTATAAATAATGGAATGATTTTCGGGTCGTCGGAAAATTACAATAACAACAACAATAAGGCGGAGATGGTGGCGGCCGTTTGCATGAGGTGCCATTTGTTAGTGATGCTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACCACGCCGGCGATGTTCAAGCGCCGGTGTCATCTTTCTTGGTAA ATGGTTCCCTTTCAACCCCACCCTTCTTCTCTAAATGACAATACATCAACAATTAGAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATCCCGACATCACCGTTGAGCTCCATATTCGATATCGAGCTCCACCTTGAAACTCCATTACCTTTTTACTGGCAAAGGTGTCTTGACATTCAGTCTGGAAAGATACACTTTTACAACACGACAACTCAAAAGAGAACATGGAAAGATCCGAGGGACAAGGTCGAGAAAGACGATGACGACAAGGAAGATGACCACAGCTACAACGGCGAGGATATCGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCGCTGGACAAGAACAACAATAATCAAACAATACAAGGCGGGCGTCGAGCTATAAATAATGGAATGATTTTCGGGTCGTCGGAAAATTACAATAACAACAACAATAAGGCGGAGATGGTGGCGGCCGTTTGCATGAGGTGCCATTTGTTAGTGATGCTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACCACGCCGGCGATGTTCAAGCGCCGGTGTCATCTTTCTTGGTAA ATGGTTCCCTTTCAACCCCACCCTTCTTCTCTAAATGACAATACATCAACAATTAGAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATCCCGACATCACCGTTGAGCTCCATATTCGATATCGAGCTCCACCTTGAAACTCCATTACCTTTTTACTGGCAAAGGTGTCTTGACATTCAGTCTGGAAAGATACACTTTTACAACACGACAACTCAAAAGAGAACATGGAAAGATCCGAGGGACAAGGTCGAGAAAGACGATGACGACAAGGAAGATGACCACAGCTACAACGGCGAGGATATCGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCGCTGGACAAGAACAACAATAATCAAACAATACAAGGCGGGCGTCGAGCTATAAATAATGGAATGATTTTCGGGTCGTCGGAAAATTACAATAACAACAACAATAAGGCGGAGATGGTGGCGGCCGTTTGCATGAGGTGCCATTTGTTAGTGATGCTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACCACGCCGGCGATGTTCAAGCGCCGGTGTCATCTTTCTTGGTAA MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHSYNGEDIDMSLDLELNLTCESLDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFKRRCHLSW Homology
BLAST of CmUC08G152830 vs. NCBI nr
Match: XP_038885611.1 (sodium/hydrogen exchanger 1-like [Benincasa hispida]) HSP 1 Score: 372.9 bits (956), Expect = 1.8e-99 Identity = 183/207 (88.41%), Postives = 194/207 (93.72%), Query Frame = 0
BLAST of CmUC08G152830 vs. NCBI nr
Match: KAE8652131.1 (hypothetical protein Csa_021889 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92 Identity = 176/210 (83.81%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of CmUC08G152830 vs. NCBI nr
Match: XP_004152643.1 (uncharacterized protein LOC101203360 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92 Identity = 176/210 (83.81%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of CmUC08G152830 vs. NCBI nr
Match: XP_008444823.1 (PREDICTED: uncharacterized protein LOC103488058 [Cucumis melo] >KAA0065153.1 uncharacterized protein E6C27_scaffold82G004890 [Cucumis melo var. makuwa]) HSP 1 Score: 347.8 bits (891), Expect = 6.3e-92 Identity = 177/213 (83.10%), Postives = 189/213 (88.73%), Query Frame = 0
BLAST of CmUC08G152830 vs. NCBI nr
Match: XP_023002678.1 (uncharacterized protein LOC111496462 [Cucurbita maxima]) HSP 1 Score: 292.7 bits (748), Expect = 2.4e-75 Identity = 152/205 (74.15%), Postives = 171/205 (83.41%), Query Frame = 0
BLAST of CmUC08G152830 vs. ExPASy TrEMBL
Match: A0A0A0LNT8 (WW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G368900 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92 Identity = 176/210 (83.81%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of CmUC08G152830 vs. ExPASy TrEMBL
Match: A0A5A7VAF4 (WW domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004890 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.0e-92 Identity = 177/213 (83.10%), Postives = 189/213 (88.73%), Query Frame = 0
BLAST of CmUC08G152830 vs. ExPASy TrEMBL
Match: A0A1S3BAS4 (uncharacterized protein LOC103488058 OS=Cucumis melo OX=3656 GN=LOC103488058 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.0e-92 Identity = 177/213 (83.10%), Postives = 189/213 (88.73%), Query Frame = 0
BLAST of CmUC08G152830 vs. ExPASy TrEMBL
Match: A0A6J1KU99 (uncharacterized protein LOC111496462 OS=Cucurbita maxima OX=3661 GN=LOC111496462 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.2e-75 Identity = 152/205 (74.15%), Postives = 171/205 (83.41%), Query Frame = 0
BLAST of CmUC08G152830 vs. ExPASy TrEMBL
Match: A0A6J1GKF5 (uncharacterized protein LOC111454730 OS=Cucurbita moschata OX=3662 GN=LOC111454730 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 2.1e-72 Identity = 148/205 (72.20%), Postives = 166/205 (80.98%), Query Frame = 0
BLAST of CmUC08G152830 vs. TAIR 10
Match: AT4G08910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 4.0e-12 Identity = 42/125 (33.60%), Postives = 64/125 (51.20%), Query Frame = 0
BLAST of CmUC08G152830 vs. TAIR 10
Match: AT1G78170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 6.9e-12 Identity = 58/185 (31.35%), Postives = 88/185 (47.57%), Query Frame = 0
BLAST of CmUC08G152830 vs. TAIR 10
Match: AT1G22250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 5.4e-09 Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of CmUC08G152830 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04 Identity = 41/173 (23.70%), Postives = 69/173 (39.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|