CmUC08G152340 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCAAAGGGATTGCAACAAAACGCTCTCCAAAGGCAAAGCTTGGGAATGGAGGATTTTGGTGCAGCTGAGTTTCCAGGCTTTCAAACCACTGTTGCTCACAAAGACGACGTCGTTTACAAGAGGCCGTTGACTCGGTTGCAACGCCGTGCTCCTCACCCTCTCCCATTACCATGCCCCACCTCTTTTCCCTCGTGCGGTGGTGCATCAAAACAACCACCTGTTCACCACAACAACACTTCTTTTTCTTCGACGTCAAATGCATCTTTTCAATGTAGAGATCCGATCCCGTTACTTTCACCCCTTGTATGTCCATCGTTATTCGAATCTCGCTATGTCATAGAGCAAAATGTTACTAACAAGTTAGGTCGAACCGAATTGTGA ATGGAAGCAAAGGGATTGCAACAAAACGCTCTCCAAAGGCAAAGCTTGGGAATGGAGGATTTTGGTGCAGCTGAGTTTCCAGGCTTTCAAACCACTGTTGCTCACAAAGACGACGTCGTTTACAAGAGGCCGTTGACTCGGTTGCAACGCCGTGCTCCTCACCCTCTCCCATTACCATGCCCCACCTCTTTTCCCTCGTGCGGTGGTGCATCAAAACAACCACCTGTTCACCACAACAACACTTCTTTTTCTTCGACGTCAAATGCATCTTTTCAATGTAGAGATCCGATCCCGTTACTTTCACCCCTTGTATGTCCATCGTTATTCGAATCTCGCTATGTCATAGAGCAAAATGTTACTAACAAGTTAGGTCGAACCGAATTGTGA ATGGAAGCAAAGGGATTGCAACAAAACGCTCTCCAAAGGCAAAGCTTGGGAATGGAGGATTTTGGTGCAGCTGAGTTTCCAGGCTTTCAAACCACTGTTGCTCACAAAGACGACGTCGTTTACAAGAGGCCGTTGACTCGGTTGCAACGCCGTGCTCCTCACCCTCTCCCATTACCATGCCCCACCTCTTTTCCCTCGTGCGGTGGTGCATCAAAACAACCACCTGTTCACCACAACAACACTTCTTTTTCTTCGACGTCAAATGCATCTTTTCAATGTAGAGATCCGATCCCGTTACTTTCACCCCTTGTATGTCCATCGTTATTCGAATCTCGCTATGTCATAGAGCAAAATGTTACTAACAAGTTAGGTCGAACCGAATTGTGA MEAKGLQQNALQRQSLGMEDFGAAEFPGFQTTVAHKDDVVYKRPLTRLQRRAPHPLPLPCPTSFPSCGGASKQPPVHHNNTSFSSTSNASFQCRDPIPLLSPLVCPSLFESRYVIEQNVTNKLGRTEL Homology
BLAST of CmUC08G152340 vs. NCBI nr
Match: KAE8647257.1 (hypothetical protein Csa_018305, partial [Cucumis sativus]) HSP 1 Score: 167.5 bits (423), Expect = 7.3e-38 Identity = 96/133 (72.18%), Postives = 104/133 (78.20%), Query Frame = 0
BLAST of CmUC08G152340 vs. NCBI nr
Match: KAB1206573.1 (hypothetical protein CJ030_MR7G020458 [Morella rubra] >KAB1206574.1 hypothetical protein CJ030_MR7G020459 [Morella rubra]) HSP 1 Score: 99.0 bits (245), Expect = 3.2e-17 Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of CmUC08G152340 vs. NCBI nr
Match: XP_042979927.1 (uncharacterized protein LOC122310107 [Carya illinoinensis] >KAG2706907.1 hypothetical protein I3760_05G123700 [Carya illinoinensis] >KAG6654100.1 hypothetical protein CIPAW_05G122300 [Carya illinoinensis] >KAG6712790.1 hypothetical protein I3842_05G119400 [Carya illinoinensis]) HSP 1 Score: 94.7 bits (234), Expect = 6.0e-16 Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of CmUC08G152340 vs. NCBI nr
Match: EXB44891.1 (hypothetical protein L484_026473 [Morus notabilis]) HSP 1 Score: 94.0 bits (232), Expect = 1.0e-15 Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of CmUC08G152340 vs. NCBI nr
Match: PON64471.1 (hypothetical protein TorRG33x02_273200 [Trema orientale]) HSP 1 Score: 91.3 bits (225), Expect = 6.6e-15 Identity = 55/104 (52.88%), Postives = 68/104 (65.38%), Query Frame = 0
BLAST of CmUC08G152340 vs. ExPASy TrEMBL
Match: A0A0A0KDQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367140 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38 Identity = 97/135 (71.85%), Postives = 105/135 (77.78%), Query Frame = 0
BLAST of CmUC08G152340 vs. ExPASy TrEMBL
Match: A0A6A1V1J8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G020458 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.5e-17 Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of CmUC08G152340 vs. ExPASy TrEMBL
Match: W9QP10 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026473 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 5.0e-16 Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of CmUC08G152340 vs. ExPASy TrEMBL
Match: A0A2P5CTY4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273200 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.2e-15 Identity = 55/104 (52.88%), Postives = 68/104 (65.38%), Query Frame = 0
BLAST of CmUC08G152340 vs. ExPASy TrEMBL
Match: A0A2I4H8F7 (uncharacterized protein LOC109014412 OS=Juglans regia OX=51240 GN=LOC109014412 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.2e-15 Identity = 59/108 (54.63%), Postives = 71/108 (65.74%), Query Frame = 0
BLAST of CmUC08G152340 vs. TAIR 10
Match: AT1G69050.1 (unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09 Identity = 46/96 (47.92%), Postives = 53/96 (55.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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