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CmUC08G151850 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACATTTCTCCAAAACCCTTCATTTCTCTTCCCTTTTCATTCTTCTCATCTTCCACCTCACCGGAGCTACGGCAGCTGCGGCCGAAGATGGCCGTGTGGTCGAGGTGGTTCCTCCGGTTAGCCTTCTTTGTATTAGCGAATGTTCAACTTGCCCCACCATATGTGCGCCGCCGCCGCCGCCGCCGCCCATGGTGGTGCCCAAGTCACCGCCACCGGTGCCCCATGTGCCACCCCTGGCTTACTTCCCACTCAATTCACCCCCACCTCGACAAACCCCATCTCCACCGCCGCCGTCGCCGTCGCCACCACCGCCGGCGGCGGTGGCTTCATCTCATTCCCCGCCGCCTCCCGCATTCAAATATTATTTCAATTTGCCACCACCGCCGCCGGTGCTGATTCCAGTACCTGTGCCGCCGACCGGCACGGCGGCGCCTCATGGAAATACGAATACTAATGCTTATAATTACTACTTTTACGCTCCGACATCGTCTTCTCCGTCTCTTCCGGCGGCGTTTTTCTGGGGTCTGTTTCTCTTCCAGTTGATGTTGTTGTCTTCATGGTGA ATGGAACATTTCTCCAAAACCCTTCATTTCTCTTCCCTTTTCATTCTTCTCATCTTCCACCTCACCGGAGCTACGGCAGCTGCGGCCGAAGATGGCCGTGTGGTCGAGGTGGTTCCTCCGGTTAGCCTTCTTTGTATTAGCGAATGTTCAACTTGCCCCACCATATGTGCGCCGCCGCCGCCGCCGCCGCCCATGGTGGTGCCCAAGTCACCGCCACCGGTGCCCCATGTGCCACCCCTGGCTTACTTCCCACTCAATTCACCCCCACCTCGACAAACCCCATCTCCACCGCCGCCGTCGCCGTCGCCACCACCGCCGGCGGCGGTGGCTTCATCTCATTCCCCGCCGCCTCCCGCATTCAAATATTATTTCAATTTGCCACCACCGCCGCCGGTGCTGATTCCAGTACCTGTGCCGCCGACCGGCACGGCGGCGCCTCATGGAAATACGAATACTAATGCTTATAATTACTACTTTTACGCTCCGACATCGTCTTCTCCGTCTCTTCCGGCGGCGTTTTTCTGGGGTCTGTTTCTCTTCCAGTTGATGTTGTTGTCTTCATGGTGA ATGGAACATTTCTCCAAAACCCTTCATTTCTCTTCCCTTTTCATTCTTCTCATCTTCCACCTCACCGGAGCTACGGCAGCTGCGGCCGAAGATGGCCGTGTGGTCGAGGTGGTTCCTCCGGTTAGCCTTCTTTGTATTAGCGAATGTTCAACTTGCCCCACCATATGTGCGCCGCCGCCGCCGCCGCCGCCCATGGTGGTGCCCAAGTCACCGCCACCGGTGCCCCATGTGCCACCCCTGGCTTACTTCCCACTCAATTCACCCCCACCTCGACAAACCCCATCTCCACCGCCGCCGTCGCCGTCGCCACCACCGCCGGCGGCGGTGGCTTCATCTCATTCCCCGCCGCCTCCCGCATTCAAATATTATTTCAATTTGCCACCACCGCCGCCGGTGCTGATTCCAGTACCTGTGCCGCCGACCGGCACGGCGGCGCCTCATGGAAATACGAATACTAATGCTTATAATTACTACTTTTACGCTCCGACATCGTCTTCTCCGTCTCTTCCGGCGGCGTTTTTCTGGGGTCTGTTTCTCTTCCAGTTGATGTTGTTGTCTTCATGGTGA MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLMLLSSW Homology
BLAST of CmUC08G151850 vs. NCBI nr
Match: XP_011657382.1 (extensin [Cucumis sativus] >KGN47605.1 hypothetical protein Csa_018938 [Cucumis sativus]) HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70 Identity = 157/191 (82.20%), Postives = 162/191 (84.82%), Query Frame = 0
BLAST of CmUC08G151850 vs. NCBI nr
Match: KAA0064726.1 (classical arabinogalactan protein 9-like [Cucumis melo var. makuwa]) HSP 1 Score: 274.6 bits (701), Expect = 6.2e-70 Identity = 158/191 (82.72%), Postives = 164/191 (85.86%), Query Frame = 0
BLAST of CmUC08G151850 vs. NCBI nr
Match: XP_008445508.1 (PREDICTED: classical arabinogalactan protein 9-like [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 7.9e-65 Identity = 149/179 (83.24%), Postives = 154/179 (86.03%), Query Frame = 0
BLAST of CmUC08G151850 vs. NCBI nr
Match: XP_022132157.1 (leucine-rich repeat extensin-like protein 3 [Momordica charantia]) HSP 1 Score: 214.9 bits (546), Expect = 5.8e-52 Identity = 135/192 (70.31%), Postives = 144/192 (75.00%), Query Frame = 0
BLAST of CmUC08G151850 vs. NCBI nr
Match: XP_022951103.1 (extensin-3-like [Cucurbita moschata]) HSP 1 Score: 196.1 bits (497), Expect = 2.8e-46 Identity = 129/185 (69.73%), Postives = 139/185 (75.14%), Query Frame = 0
BLAST of CmUC08G151850 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.8e-04 Identity = 50/122 (40.98%), Postives = 58/122 (47.54%), Query Frame = 0
BLAST of CmUC08G151850 vs. ExPASy TrEMBL
Match: A0A0A0KD44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363610 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 6.1e-71 Identity = 157/191 (82.20%), Postives = 162/191 (84.82%), Query Frame = 0
BLAST of CmUC08G151850 vs. ExPASy TrEMBL
Match: A0A5A7VEH7 (Classical arabinogalactan protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00300 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 3.0e-70 Identity = 158/191 (82.72%), Postives = 164/191 (85.86%), Query Frame = 0
BLAST of CmUC08G151850 vs. ExPASy TrEMBL
Match: A0A1S3BCX5 (classical arabinogalactan protein 9-like OS=Cucumis melo OX=3656 GN=LOC103488504 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.8e-65 Identity = 149/179 (83.24%), Postives = 154/179 (86.03%), Query Frame = 0
BLAST of CmUC08G151850 vs. ExPASy TrEMBL
Match: A0A6J1BT26 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111005088 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.8e-52 Identity = 135/192 (70.31%), Postives = 144/192 (75.00%), Query Frame = 0
BLAST of CmUC08G151850 vs. ExPASy TrEMBL
Match: A0A6J1GGS2 (extensin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111454053 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46 Identity = 129/185 (69.73%), Postives = 139/185 (75.14%), Query Frame = 0
BLAST of CmUC08G151850 vs. TAIR 10
Match: AT5G11990.1 (proline-rich family protein ) HSP 1 Score: 51.6 bits (122), Expect = 8.0e-07 Identity = 74/183 (40.44%), Postives = 91/183 (49.73%), Query Frame = 0
BLAST of CmUC08G151850 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.0e-05 Identity = 50/122 (40.98%), Postives = 58/122 (47.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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