CmUC08G151680 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGAGATTCCCGTAGCTTCGAAATCATGGCGCGACTCGTGTGTGAGAGAGAGGGAGAGACCTCTGGTGTTCGCTTCTGCATCTCTCTTCAATCCATTATCCTCTTCTTCCTCAGCTAGCTATCTCAGAGACGAGCAGAGCAAGATGACTCCAGACGAGTCGTCACTTCTAAACCCTAGACGAACTTCTACGGCTTTCAACTTCTTTCCAAATTGCATATCCTCATTCTCACCTGCATTTTCTCAAACACCTTCAGGACCATCCAGGAGAAGGCACGCTGAATTCCTCCCTCCATGTAATTTTCTTCGCGACCTCCATGATTCTTTCGCATCAAATACTGAAAGATGCATCAGATTTTTTCACTCATTGGCTTCTGAGAATCCATTTCTCAATAAATTGCTCTCGTTGCATTCTGAGTTCCAGAGTTTCCGTCACCAGGTAACTAACTGCAACTGTAATTTGACGGTTTCGTGAAATTCTGATTCGTGTTTCTAATGCAATTGCTCCGTTTCTTGCACTTCTGGCTGTGTGTACAGTTTGATTTTCAGATAGAATATGACACGCTTCTTCCGGTTAATTTTTTTCCCGGGGGTTTCAATTTTCTAATCTTTGCAGTACTTTGTTTTGAATTCTGTTTCAGGTCCACGGTATGAACTCCAGGAATTTCCGAGCTCTCTCCAGTCACAATTTTGCTGCAGTTTTGCCGGGGGATTCTGTGGCAGGACTTGTAGTCGCTAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCGTCAGACTAGTTTTGACTTGGTTTCCAAACACACCTCCCGCCATTGTTAGTCCACTAAGGTAACTTTTTTATTTGTTTTTGTCTTAAGTATTCAAAGTGAAGAAAGAAGAGAGACGTTTTCATAATGATTGGTTGTGAGCCTGGAATGAGATTTCTGAACTGAATATAGCAGCAAGCTTTTATATCCTTACAGCTTGAAAGAGGGAAATATCTGTAGTGGGTGTTTGGCCAGAGTGATTTAGAAGTTAAAGTTGAAATGTATATTGTTTAAATTCTAAGCTATACTGATCCAACTCACATTCAAATTCACACTACTGATTCACTCATATGTTGTCTTTTGCTGTCTTTTGCTTCAGAAACAGATCTTAAAAACTGCTGTCAAACAAATATTATGGACAAAAAAAAAAGGCCCAAGAAGACTTTTTCTTATATAATAGAAGACAATAATTAGTTTATAAGAGTCTGTTTTTTGCGCTTAATATATACATATATATTTTTAACGTTAAAATACTTTTTAACACTCCATGTTTGAAACGACTTTCTAAATGCTCAAGTATAAACAAAATATTTTTAAGCATTTGATAAGTCACTTAAAGGGAAAAAAAAAACTTTAAAAATCATTTCAAGTCGACTCTAAGTGGGATAACCTCATAGTTATGATACCTCATATCTCATATATCTTTGTATCCACTATCAATTGCCTGCTGTGCTGCTAGCTGATGGGGTGTCTTTATTTTAGTTTGCCTTAGATTAGAAAATATGTAAAAATGAATAATAACAAGAATAAGAAGAATAAGATTTTTGTAATAATATATATAGAGAGAAAGTTACAATGTAAATTTTTGTGCTAATTGTCATGATTTGTTTCTCTCTCAGCACTTTATGCGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTTGGAGGGACACTTGATTTATCTCCAATATTGGCATTCCTGGTCTTAAATGCCTTTACCAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGTCCCAAATTCGTCTCTTGCAAATCCTACTCCTTTAGAAGGCTCTGTTGATCTTACAACATCACAAAAGAAATGGATGAGAAGGCTTCAGGGAAGTGGAAAAAATAATGCCGATGCTGCTCAATAGCCTATAATTCAGGTTCTTATATGTTGATTGAGCTCAATTTATTTGAAACTGTGACACTCTTTCATCCTTGTATCCTCTCTATTGTAAAGTGCGGTTGATGGGATTACTCCTTTGTGCCATTTTTCTTGATTATGTACACTGTAAATCTTTTAGTTCAGTCAAATTGGTGAGATCACTTTCTTCCGTATCTATCAAGGCATGTAAATTTTATATTTAATAGATTTTTCGGACTACTTGTCTCTACCCTCTGTTTTTCTCCCCAAATTTTGTATAATTTCAAATTAATTCATTTGTGCACTTTGTTAGCCATTTT CAGAGATTCCCGTAGCTTCGAAATCATGGCGCGACTCGTGTGTGAGAGAGAGGGAGAGACCTCTGGTGTTCGCTTCTGCATCTCTCTTCAATCCATTATCCTCTTCTTCCTCAGCTAGCTATCTCAGAGACGAGCAGAGCAAGATGACTCCAGACGAGTCGTCACTTCTAAACCCTAGACGAACTTCTACGGCTTTCAACTTCTTTCCAAATTGCATATCCTCATTCTCACCTGCATTTTCTCAAACACCTTCAGGACCATCCAGGAGAAGGCACGCTGAATTCCTCCCTCCATGTAATTTTCTTCGCGACCTCCATGATTCTTTCGCATCAAATACTGAAAGATGCATCAGATTTTTTCACTCATTGGCTTCTGAGAATCCATTTCTCAATAAATTGCTCTCGTTGCATTCTGAGTTCCAGAGTTTCCGTCACCAGGTCCACGGTATGAACTCCAGGAATTTCCGAGCTCTCTCCAGTCACAATTTTGCTGCAGTTTTGCCGGGGGATTCTGTGGCAGGACTTGTAGTCGCTAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCGTCAGACTAGTTTTGACTTGGTTTCCAAACACACCTCCCGCCATTGTTAGTCCACTAAGCACTTTATGCGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTTGGAGGGACACTTGATTTATCTCCAATATTGGCATTCCTGGTCTTAAATGCCTTTACCAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGTCCCAAATTCGTCTCTTGCAAATCCTACTCCTTTAGAAGGCTCTGTTGATCTTACAACATCACAAAAGAAATGGATGAGAAGGCTTCAGGGAAGTGGAAAAAATAATGCCGATGCTGCTCAATAGCCTATAATTCAGGTTCTTATATGTTGATTGAGCTCAATTTATTTGAAACTGTGACACTCTTTCATCCTTGTATCCTCTCTATTGTAAAGTGCGGTTGATGGGATTACTCCTTTGTGCCATTTTTCTTGATTATGTACACTGTAAATCTTTTAGTTCAGTCAAATTGGTGAGATCACTTTCTTCCGTATCTATCAAGGCATGTAAATTTTATATTTAATAGATTTTTCGGACTACTTGTCTCTACCCTCTGTTTTTCTCCCCAAATTTTGTATAATTTCAAATTAATTCATTTGTGCACTTTGTTAGCCATTTT ATGACTCCAGACGAGTCGTCACTTCTAAACCCTAGACGAACTTCTACGGCTTTCAACTTCTTTCCAAATTGCATATCCTCATTCTCACCTGCATTTTCTCAAACACCTTCAGGACCATCCAGGAGAAGGCACGCTGAATTCCTCCCTCCATGTAATTTTCTTCGCGACCTCCATGATTCTTTCGCATCAAATACTGAAAGATGCATCAGATTTTTTCACTCATTGGCTTCTGAGAATCCATTTCTCAATAAATTGCTCTCGTTGCATTCTGAGTTCCAGAGTTTCCGTCACCAGGTCCACGGTATGAACTCCAGGAATTTCCGAGCTCTCTCCAGTCACAATTTTGCTGCAGTTTTGCCGGGGGATTCTGTGGCAGGACTTGTAGTCGCTAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCGTCAGACTAGTTTTGACTTGGTTTCCAAACACACCTCCCGCCATTGTTAGTCCACTAAGCACTTTATGCGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTTGGAGGGACACTTGATTTATCTCCAATATTGGCATTCCTGGTCTTAAATGCCTTTACCAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGTCCCAAATTCGTCTCTTGCAAATCCTACTCCTTTAGAAGGCTCTGTTGATCTTACAACATCACAAAAGAAATGGATGAGAAGGCTTCAGGGAAGTGGAAAAAATAATGCCGATGCTGCTCAATAG MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDSFASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLPGDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRRLQGSGKNNADAAQ Homology
BLAST of CmUC08G151680 vs. NCBI nr
Match: XP_038884266.1 (ylmG homolog protein 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129 Identity = 238/253 (94.07%), Postives = 244/253 (96.44%), Query Frame = 0
BLAST of CmUC08G151680 vs. NCBI nr
Match: XP_008445540.1 (PREDICTED: ylmG homolog protein 2, chloroplastic [Cucumis melo] >KAA0064706.1 ylmG-like protein 2 [Cucumis melo var. makuwa] >TYK00724.1 ylmG-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124 Identity = 231/253 (91.30%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of CmUC08G151680 vs. NCBI nr
Match: XP_004144214.1 (ylmG homolog protein 2, chloroplastic [Cucumis sativus] >KGN47583.1 hypothetical protein Csa_019073 [Cucumis sativus]) HSP 1 Score: 447.6 bits (1150), Expect = 7.2e-122 Identity = 225/253 (88.93%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of CmUC08G151680 vs. NCBI nr
Match: KAG7029531.1 (YlmG-like protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 444.5 bits (1142), Expect = 6.1e-121 Identity = 221/253 (87.35%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of CmUC08G151680 vs. NCBI nr
Match: XP_022961827.1 (ylmG homolog protein 2, chloroplastic [Cucurbita moschata]) HSP 1 Score: 441.8 bits (1135), Expect = 4.0e-120 Identity = 219/253 (86.56%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy Swiss-Prot
Match: Q9C595 (YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 PE=2 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 7.6e-58 Identity = 128/224 (57.14%), Postives = 154/224 (68.75%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy Swiss-Prot
Match: Q9SRS3 (YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-1 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14 Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy Swiss-Prot
Match: Q9SUE0 (YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-2 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.8e-14 Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy Swiss-Prot
Match: O78424 (Uncharacterized protein ycf19 OS=Guillardia theta OX=55529 GN=ycf19 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.2e-08 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy Swiss-Prot
Match: P51353 (Uncharacterized protein ycf19 OS=Porphyra purpurea OX=2787 GN=ycf19 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.4e-05 Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy TrEMBL
Match: A0A5D3BN87 (YlmG-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00120 PE=4 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 1.3e-124 Identity = 231/253 (91.30%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy TrEMBL
Match: A0A1S3BDU1 (ylmG homolog protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488523 PE=4 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 1.3e-124 Identity = 231/253 (91.30%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy TrEMBL
Match: A0A0A0KDJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G362410 PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 3.5e-122 Identity = 225/253 (88.93%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy TrEMBL
Match: A0A6J1HB64 (ylmG homolog protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462476 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.9e-120 Identity = 219/253 (86.56%), Postives = 237/253 (93.68%), Query Frame = 0
BLAST of CmUC08G151680 vs. ExPASy TrEMBL
Match: A0A6J1K921 (ylmG homolog protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492206 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 1.2e-119 Identity = 219/250 (87.60%), Postives = 234/250 (93.60%), Query Frame = 0
BLAST of CmUC08G151680 vs. TAIR 10
Match: AT5G21920.1 (YGGT family protein ) HSP 1 Score: 225.3 bits (573), Expect = 5.4e-59 Identity = 128/224 (57.14%), Postives = 154/224 (68.75%), Query Frame = 0
BLAST of CmUC08G151680 vs. TAIR 10
Match: AT5G21920.2 (YGGT family protein ) HSP 1 Score: 214.5 bits (545), Expect = 9.6e-56 Identity = 124/223 (55.61%), Postives = 149/223 (66.82%), Query Frame = 0
BLAST of CmUC08G151680 vs. TAIR 10
Match: AT3G07430.1 (YGGT family protein ) HSP 1 Score: 80.5 bits (197), Expect = 2.2e-15 Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of CmUC08G151680 vs. TAIR 10
Match: AT4G27990.1 (YGGT family protein ) HSP 1 Score: 79.3 bits (194), Expect = 4.8e-15 Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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