CmUC08G151450 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G151450
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr08: 20854308 .. 20854637 (+)
RNA-Seq Expression	CmUC08G151450
Synteny	CmUC08G151450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATCTACAATGATCCGAATCCAGCAATTGAGCAAATAAAGAATACAAAAGGCATCGATCACCCTAAAATTGAGAATCTGAAGAATGAATATAAGGAAGAAGAAAGATACCTGGAGGATGAAATATTGGAGGTAGAAGAGAAGAAGGAGACGGAAGCCCACTCGTGCTTGGATCGAATCTGGTATTCTCTCAACTGCTCAACCAGATTCGATCGAGTAATCATGGCTGAACCCCGAGACCTTCTTTTCTTTGCCTCAAGGGAGGAAGGGCGACGGAGGAGATTGGAGGATTTAACACAGCTACAAACGAATCGAACAAGGAATTGA

mRNA sequence

ATGAACATCTACAATGATCCGAATCCAGCAATTGAGCAAATAAAGAATACAAAAGGCATCGATCACCCTAAAATTGAGAATCTGAAGAATGAATATAAGGAAGAAGAAAGATACCTGGAGGATGAAATATTGGAGGTAGAAGAGAAGAAGGAGACGGAAGCCCACTCGTGCTTGGATCGAATCTGGTATTCTCTCAACTGCTCAACCAGATTCGATCGAGTAATCATGGCTGAACCCCGAGACCTTCTTTTCTTTGCCTCAAGGGAGGAAGGGCGACGGAGGAGATTGGAGGATTTAACACAGCTACAAACGAATCGAACAAGGAATTGA

Coding sequence (CDS)

ATGAACATCTACAATGATCCGAATCCAGCAATTGAGCAAATAAAGAATACAAAAGGCATCGATCACCCTAAAATTGAGAATCTGAAGAATGAATATAAGGAAGAAGAAAGATACCTGGAGGATGAAATATTGGAGGTAGAAGAGAAGAAGGAGACGGAAGCCCACTCGTGCTTGGATCGAATCTGGTATTCTCTCAACTGCTCAACCAGATTCGATCGAGTAATCATGGCTGAACCCCGAGACCTTCTTTTCTTTGCCTCAAGGGAGGAAGGGCGACGGAGGAGATTGGAGGATTTAACACAGCTACAAACGAATCGAACAAGGAATTGA

Protein sequence

MNIYNDPNPAIEQIKNTKGIDHPKIENLKNEYKEEERYLEDEILEVEEKKETEAHSCLDRIWYSLNCSTRFDRVIMAEPRDLLFFASREEGRRRRLEDLTQLQTNRTRN

Homology

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BLAST of CmUC08G151450 vs. ExPASy TrEMBL
Match: A0A1J3CG26 (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR539_c0_g1_i1_g.1827 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 39 LEDEILEVEEKKETEAHSCLDRIWYSLNCSTRFDRVIMAE------PRDLLF 85
          L++E LEV+EKKET+A SC DRIWYSL+CS RFD VI+A       P+ LLF
Sbjct: 47 LDEEKLEVDEKKETDAQSCFDRIWYSLSCSARFDLVIIASYATFLPPKILLF 98

The following BLAST results are available for this feature:

BLAST of CmUC08G151450 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC08G151450 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC08G151450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1J3CG26	1.0e-06	61.54	Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR539_c0_g1_i1_g...	[more]

BLAST of CmUC08G151450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 25..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G151450.1	CmUC08G151450.1	mRNA