CmUC08G150970 (gene) Watermelon (USVL531) v1

Overview
NameCmUC08G150970
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25-like
LocationCmU531Chr08: 20375856 .. 20377630 (+)
RNA-Seq ExpressionCmUC08G150970
SyntenyCmUC08G150970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTGTTTTTGTATGTGCATGAAAATACACAATCCAAAGTTAAAGATGAGTGTCGTATTTATGACTCTCTTCTCAGTATAAAGCAACCAGCTGGGTTCCCTCCATCTCACGTTTGAAGCCATTTTATTTTCTTTTATTTTCTTTTTTTTTTTTTTTTTAATTTTTTTCCTTCTCTTTTCTCTCTCTCTAGGTTCGAGAAAGTGCAACAGAATCCTAAACAAAACCCAACCCAACCACCTTTGAATAACCCTCGTTTTGAAGCAACTTATAACACAAAAACAAACTTCTCTTCAGCTTCTTACAATTACCAATTCTTTTCTCACTTTCTCTCTACAACCCAAAATCAAATTCCTGTCATGTAGTGGTTTCTCTAAAGAGAGAGAAAATGAGTTGTTATTCTCCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCTTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCGGTTGCGGTAGGGATTGAGAAGGGGACGGCGACGATGACAGGTGAATTCAGTGGAATTTCTGGAGAGAAGGAGGTGGTCGGTGGTGGTCGCAACAAGCTTGTTCATCCAGAGTGGCACCTCAACTACATAAGCAAGAGAAGAGTTCCAAATGGCCCAGATCCTATCCATAACCGGTATCACGATTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAATTAGATTTCACAATCATAGGTGCAGCCCGGCCAGCACCCAATTTTTTTTTTTTTTTTTTAGTTCACAGCTATAAGTGGGATAGGCTTTGAATTTTTTTTTTTTTTTTATCGAATTACAATTGAGCTTCAGGTTTTGTAAAACCATGTGGCTGTGTATATGTGTCTGAAATTTTGTTTTGTTTTTTATTTGTTTCATTAAAAAAAAAAAAGAAAAAAGGGAAATTAAGAAAGTATATTTGATAGATTTAGAGAGAGAGAGATGGAAATGGAAAAGGAGAGAGTGGGAGAGATAAAAAGTTCAAATTTAATCACTTTGCCTTTTAAAACTGTTACATTGAGTTCTTTTAGCTTAAAGGGTGTCATTTAAAGTCCTTGGTTGAAGGTGACACAAACATCTTTAAAACCACAGTAAATAAAAGTATGTATGTGTGTGTACTTCAATATATTCCATGCCTTTTAGTTAATCAATATCTCTTTATCCATTGCCTAATTAGTAAACTATTAGGTCTAAATTCCTCTCTAACTATAATTTCTCAATTATTTTAGTTTAAGAAAATTTTAATTTCAAGTCACACATTCAATCTAATATAAAATACGAACACAAGGATATAAGATTTAAGATAAATGGTTAATTTTATCTTTAAAATAAAAGAAAATATCAATCATAACATAGTTTAGTATATCAAGTCACTCATTCCAAAAGTTTATGTTTCGATTTTCATCCTAAAAACATTGAACTAATAAACGTTTTAAATCAAAATCTAATTAGTTTATTAGACACGAAGATAACATTTTATTTTTTGTTTTTATTTCTTAGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAGCTTTAAGAAAGAAATTAAAGCTTTATGGAAAAAATTGGGCTTTCAAGATGACACAGATGTCTGATCTGCTATCTTGTATGTATTAATTTTAGGTATTAATGATGAAAAACTTATCGGATTGATTTTTCGTTAGAATTTAGGACCCTTTTGATAGCATTTTTGTTTTTAATTTTTAAAGATTATGTGTATTTACTACCACTTGTCTTTTGTCTATCATCA

mRNA sequence

CTTTGTTTTTGTATGTGCATGAAAATACACAATCCAAAGTTAAAGATGAGTGTCGTATTTATGACTCTCTTCTCAGTATAAAGCAACCAGCTGGGTTCGAGAAAGTGCAACAGAATCCTAAACAAAACCCAACCCAACCACCTTTGAATAACCCTCGTTTTGAAGCAACTTATAACACAAAAACAAACTTCTCTTCAGCTTCTTACAATTACCAATTCTTTTCTCACTTTCTCTCTACAACCCAAAATCAAATTCCTGTCATGTAGTGGTTTCTCTAAAGAGAGAGAAAATGAGTTGTTATTCTCCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCTTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCGGTTGCGGTAGGGATTGAGAAGGGGACGGCGACGATGACAGGTGAATTCAGTGGAATTTCTGGAGAGAAGGAGGTGGTCGGTGGTGGTCGCAACAAGCTTGTTCATCCAGAGTGGCACCTCAACTACATAAGCAAGAGAAGAGTTCCAAATGGCCCAGATCCTATCCATAACCGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAGCTTTAAGAAAGAAATTAAAGCTTTATGGAAAAAATTGGGCTTTCAAGATGACACAGATGTCTGATCTGCTATCTTGTATGTATTAATTTTAGGTATTAATGATGAAAAACTTATCGGATTGATTTTTCGTTAGAATTTAGGACCCTTTTGATAGCATTTTTGTTTTTAATTTTTAAAGATTATGTGTATTTACTACCACTTGTCTTTTGTCTATCATCA

Coding sequence (CDS)

ATGAGTTGTTATTCTCCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCTTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCGGTTGCGGTAGGGATTGAGAAGGGGACGGCGACGATGACAGGTGAATTCAGTGGAATTTCTGGAGAGAAGGAGGTGGTCGGTGGTGGTCGCAACAAGCTTGTTCATCCAGAGTGGCACCTCAACTACATAAGCAAGAGAAGAGTTCCAAATGGCCCAGATCCTATCCATAACCGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAG

Protein sequence

MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA
Homology
BLAST of CmUC08G150970 vs. NCBI nr
Match: XP_038886261.1 (uncharacterized protein LOC120076488 [Benincasa hispida])

HSP 1 Score: 169.5 bits (428), Expect = 1.5e-38
Identity = 86/108 (79.63%), Postives = 92/108 (85.19%), Query Frame = 0

Query: 1   MSCYSPSCKLG-SLAVMAFIWLLLANGSHQRGEPVAVGIEKG----TATMTGEFSGISGE 60
           MSCYSPSCKLG SLAVM FI+LLL NGSHQR +PVA  +EK     TATMT EFSGIS E
Sbjct: 1   MSCYSPSCKLGNSLAVMVFIFLLLVNGSHQRRQPVAAEMEKATVTITATMTAEFSGISKE 60

Query: 61  KEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
            +VV GGR K+VHPEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 61  MKVVHGGRGKVVHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 108

BLAST of CmUC08G150970 vs. NCBI nr
Match: KAG7030012.1 (CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.1 bits (370), Expect = 8.2e-32
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 0

Query: 1   MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVG 60
           MS YSPSCK  ++AVM FIWLLL NGSHQRG+ VA G+   T T   +F GIS E EVVG
Sbjct: 1   MSSYSPSCK--AMAVMGFIWLLLVNGSHQRGQSVATGMTTTTTTTAAQFGGISKEMEVVG 60

Query: 61  G-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
           G G   +V  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 61  GHGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 102

BLAST of CmUC08G150970 vs. NCBI nr
Match: XP_004146759.1 (uncharacterized protein LOC101209880 [Cucumis sativus] >KGN47786.1 hypothetical protein Csa_003437 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 4.1e-31
Identity = 78/106 (73.58%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 1   MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEV-V 60
           M+CY  SCK GSL +MAFIWLLLANGS QR EPV VG  K T     E SGIS E  V V
Sbjct: 1   MTCYCSSCKFGSLLLMAFIWLLLANGSCQRKEPVVVG--KVTTATGDEISGISKETTVAV 60

Query: 61  GGGRNKLV--HPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
           GGGR   V  HPEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 61  GGGRGGKVVDHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 104

BLAST of CmUC08G150970 vs. NCBI nr
Match: XP_022999782.1 (uncharacterized protein LOC111494028 [Cucurbita maxima])

HSP 1 Score: 144.4 bits (363), Expect = 5.3e-31
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 0

Query: 1   MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVG 60
           MS YSPSCK  ++AVM FIWLLL NGSHQRG+ VA G+  GT     +F GIS E EVVG
Sbjct: 1   MSSYSPSCK--AMAVMGFIWLLLVNGSHQRGQSVATGM--GTTMTAAQFGGISKEMEVVG 60

Query: 61  G-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
           G G   +V  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 61  GRGGKDVVRSEWHLNYVSKRRVPNGPDPIHNRRAGNSGRPPGKA 100

BLAST of CmUC08G150970 vs. NCBI nr
Match: XP_008464794.1 (PREDICTED: uncharacterized protein LOC103502597 [Cucumis melo] >KAA0045398.1 Clavata3/esr-related 26, putative isoform 1 [Cucumis melo var. makuwa] >TYK11343.1 Clavata3/esr-related 26, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 9.1e-31
Identity = 73/101 (72.28%), Postives = 77/101 (76.24%), Query Frame = 0

Query: 3   CYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGG 62
           C+  SCK GSL VMAFIWLLLANGS QR EPV VG  K T  M  EFSG+  +  VV GG
Sbjct: 5   CWCSSCKFGSLLVMAFIWLLLANGSCQRKEPVVVG--KVTTAMGDEFSGVFKKTTVVVGG 64

Query: 63  RNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
                HPEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 65  GKVADHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 103

BLAST of CmUC08G150970 vs. ExPASy Swiss-Prot
Match: Q8LFL4 (CLAVATA3/ESR (CLE)-related protein 25 OS=Arabidopsis thaliana OX=3702 GN=CLE25 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.6e-04
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0

Query: 72  HLNYISKRRVPNGPDPIHNRRAGNSGRPP 101
           +L ++SKR+VPNGPDPIHNR+A  S RPP
Sbjct: 51  NLFHVSKRKVPNGPDPIHNRKAETSRRPP 79

BLAST of CmUC08G150970 vs. ExPASy TrEMBL
Match: A0A0A0KJ25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G402550 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31
Identity = 78/106 (73.58%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 1   MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEV-V 60
           M+CY  SCK GSL +MAFIWLLLANGS QR EPV VG  K T     E SGIS E  V V
Sbjct: 1   MTCYCSSCKFGSLLLMAFIWLLLANGSCQRKEPVVVG--KVTTATGDEISGISKETTVAV 60

Query: 61  GGGRNKLV--HPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
           GGGR   V  HPEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 61  GGGRGGKVVDHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 104

BLAST of CmUC08G150970 vs. ExPASy TrEMBL
Match: A0A6J1KBR7 (uncharacterized protein LOC111494028 OS=Cucurbita maxima OX=3661 GN=LOC111494028 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.6e-31
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 0

Query: 1   MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVG 60
           MS YSPSCK  ++AVM FIWLLL NGSHQRG+ VA G+  GT     +F GIS E EVVG
Sbjct: 1   MSSYSPSCK--AMAVMGFIWLLLVNGSHQRGQSVATGM--GTTMTAAQFGGISKEMEVVG 60

Query: 61  G-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
           G G   +V  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 61  GRGGKDVVRSEWHLNYVSKRRVPNGPDPIHNRRAGNSGRPPGKA 100

BLAST of CmUC08G150970 vs. ExPASy TrEMBL
Match: A0A5A7TRB3 (Clavata3/esr-related 26, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00170 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.4e-31
Identity = 73/101 (72.28%), Postives = 77/101 (76.24%), Query Frame = 0

Query: 3   CYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGG 62
           C+  SCK GSL VMAFIWLLLANGS QR EPV VG  K T  M  EFSG+  +  VV GG
Sbjct: 5   CWCSSCKFGSLLVMAFIWLLLANGSCQRKEPVVVG--KVTTAMGDEFSGVFKKTTVVVGG 64

Query: 63  RNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
                HPEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 65  GKVADHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 103

BLAST of CmUC08G150970 vs. ExPASy TrEMBL
Match: A0A6J1G3Y8 (uncharacterized protein LOC111450563 OS=Cucurbita moschata OX=3662 GN=LOC111450563 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.4e-31
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 0

Query: 1   MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVG 60
           MS YSPSCK  ++AVM FIWLLL NGSHQRG+ VA G+   T T   +F GIS E EVVG
Sbjct: 1   MSSYSPSCK--AMAVMGFIWLLLVNGSHQRGQSVATGMT--TTTTAAQFGGISKEMEVVG 60

Query: 61  G-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
           G G   +V  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 61  GRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 100

BLAST of CmUC08G150970 vs. ExPASy TrEMBL
Match: A0A1S3CMA2 (uncharacterized protein LOC103502597 OS=Cucumis melo OX=3656 GN=LOC103502597 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.4e-31
Identity = 73/101 (72.28%), Postives = 77/101 (76.24%), Query Frame = 0

Query: 3   CYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGG 62
           C+  SCK GSL VMAFIWLLLANGS QR EPV VG  K T  M  EFSG+  +  VV GG
Sbjct: 5   CWCSSCKFGSLLVMAFIWLLLANGSCQRKEPVVVG--KVTTAMGDEFSGVFKKTTVVVGG 64

Query: 63  RNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA 104
                HPEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 65  GKVADHPEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 103

BLAST of CmUC08G150970 vs. TAIR 10
Match: AT1G69970.2 (CLAVATA3/ESR-RELATED 26 )

HSP 1 Score: 54.3 bits (129), Expect = 6.7e-08
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 0

Query: 55  EKEVVGGGRNKLVHPEWHLNYI-SKRRVPNGPDPIHNRRAGNSGRPPGKA 104
           ++E+  G RN        L+Y+ SKR+VP GPDPIHNRRAGNS RPPG+A
Sbjct: 59  QQELEDGSRND------DLSYVASKRKVPRGPDPIHNRRAGNSRRPPGRA 102

BLAST of CmUC08G150970 vs. TAIR 10
Match: AT3G28455.1 (CLAVATA3/ESR-RELATED 25 )

HSP 1 Score: 46.2 bits (108), Expect = 1.8e-05
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0

Query: 72  HLNYISKRRVPNGPDPIHNRRAGNSGRPP 101
           +L ++SKR+VPNGPDPIHNR+A  S RPP
Sbjct: 51  NLFHVSKRKVPNGPDPIHNRKAETSRRPP 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038886261.11.5e-3879.63uncharacterized protein LOC120076488 [Benincasa hispida][more]
KAG7030012.18.2e-3271.15CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperm... [more]
XP_004146759.14.1e-3173.58uncharacterized protein LOC101209880 [Cucumis sativus] >KGN47786.1 hypothetical ... [more]
XP_022999782.15.3e-3171.15uncharacterized protein LOC111494028 [Cucurbita maxima][more]
XP_008464794.19.1e-3172.28PREDICTED: uncharacterized protein LOC103502597 [Cucumis melo] >KAA0045398.1 Cla... [more]
Match NameE-valueIdentityDescription
Q8LFL42.6e-0468.97CLAVATA3/ESR (CLE)-related protein 25 OS=Arabidopsis thaliana OX=3702 GN=CLE25 P... [more]
Match NameE-valueIdentityDescription
A0A0A0KJ252.0e-3173.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G402550 PE=4 SV=1[more]
A0A6J1KBR72.6e-3171.15uncharacterized protein LOC111494028 OS=Cucurbita maxima OX=3661 GN=LOC111494028... [more]
A0A5A7TRB34.4e-3172.28Clavata3/esr-related 26, putative isoform 1 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1G3Y84.4e-3171.15uncharacterized protein LOC111450563 OS=Cucurbita moschata OX=3662 GN=LOC1114505... [more]
A0A1S3CMA24.4e-3172.28uncharacterized protein LOC103502597 OS=Cucumis melo OX=3656 GN=LOC103502597 PE=... [more]
Match NameE-valueIdentityDescription
AT1G69970.26.7e-0858.00CLAVATA3/ESR-RELATED 26 [more]
AT3G28455.11.8e-0568.97CLAVATA3/ESR-RELATED 25 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..103
NoneNo IPR availablePANTHERPTHR34277:SF2CLAVATA3/ESR (CLE)-RELATED PROTEIN 26coord: 7..103
IPR039316CLAVATA3/ESR (CLE)-related protein 25/26PANTHERPTHR34277CLAVATA3/ESR (CLE)-RELATED PROTEIN 26coord: 7..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC08G150970.1CmUC08G150970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045168 cell-cell signaling involved in cell fate commitment