CmUC08G150330 (gene) Watermelon (USVL531) v1

Overview
NameCmUC08G150330
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionSHSP domain-containing protein
LocationCmU531Chr08: 19715893 .. 19716457 (+)
RNA-Seq ExpressionCmUC08G150330
SyntenyCmUC08G150330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTTCTCTCTTGCATATACAAACACCCAAAGCTATACCCTTCTAATTCATTCTTTGGTGGTGGATTGAAGCAATTTCAAGTACAGAGTTTTCCATTTTGTCCATTCCTTCTCCTCAAATTTTCACCTTTCAACATACCCTAGAAAGATTTTTTTCGATGTCAAGCCAGATCGTAACTCCAAATCGGAGATCCGTAACTCAACCAAATCAACAGTTTTTTCCAGATAAAAGATGGGAGGAAGATGAAGAAAATAACCAAATGTCATTGAGCATGGTACTTCCAGGTAAATTTGGCTAAAGTTAACTAGATTGATATAGATTTGTGTGTATAAATTAATTACGTTCGTTCGATTTGGTGTAGGTTTTTCAAAAGATCGACTACGAATCAACTTGAATACAAGAACAAGGACTCTTATAGTTACGGGACAAAAATCAGATGGCTTATTCAATATTATGCGTTTGAACGAACGCATACAAATCAACGAAGCATGCTCATTAGATGGAGTACATGCAAAATTACTCAACAACAATCTGTATATTACATTTCCCAAAAACAGATAA

mRNA sequence

ATGCTTCTTCTCTCTTGCATATACAAACACCCAAAGCTATACCCTTCTAATTCATTCTTTGGTGGTGGATTGAAGCAATTTCAATTTTTTCCAGATAAAAGATGGGAGGAAGATGAAGAAAATAACCAAATGTCATTGAGCATGGTACTTCCAGGTTTTTCAAAAGATCGACTACGAATCAACTTGAATACAAGAACAAGGACTCTTATAGTTACGGGACAAAAATCAGATGGCTTATTCAATATTATGCGTTTGAACGAACGCATACAAATCAACGAAGCATGCTCATTAGATGGAGTACATGCAAAATTACTCAACAACAATCTGTATATTACATTTCCCAAAAACAGATAA

Coding sequence (CDS)

ATGCTTCTTCTCTCTTGCATATACAAACACCCAAAGCTATACCCTTCTAATTCATTCTTTGGTGGTGGATTGAAGCAATTTCAATTTTTTCCAGATAAAAGATGGGAGGAAGATGAAGAAAATAACCAAATGTCATTGAGCATGGTACTTCCAGGTTTTTCAAAAGATCGACTACGAATCAACTTGAATACAAGAACAAGGACTCTTATAGTTACGGGACAAAAATCAGATGGCTTATTCAATATTATGCGTTTGAACGAACGCATACAAATCAACGAAGCATGCTCATTAGATGGAGTACATGCAAAATTACTCAACAACAATCTGTATATTACATTTCCCAAAAACAGATAA

Protein sequence

MLLLSCIYKHPKLYPSNSFFGGGLKQFQFFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR
Homology
BLAST of CmUC08G150330 vs. NCBI nr
Match: KAE8646641.1 (hypothetical protein Csa_005322 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 4.9e-25
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 0

Query: 28  QFFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNE 87
           QFFP   +EE EE N+ S SM LPGFSKDRLRINLNTRTR ++VTGQKSDGLFNI RLNE
Sbjct: 63  QFFPSITFEESEEKNKWSFSMKLPGFSKDRLRINLNTRTRIIVVTGQKSDGLFNITRLNE 122

Query: 88  RIQINEACSLDGVHAKLLNNNLYITFPKNR 118
           R+ I E C L+GV AKL N+ L +TF K +
Sbjct: 123 RVTIKEDCLLEGVQAKLSNDTLIVTFEKEK 152

BLAST of CmUC08G150330 vs. NCBI nr
Match: KAG7016359.1 (hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 0

Query: 29  FFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNER 88
           F PD +W E+E +    LSM LPGF K+RL+I LN  TRTL VTGQK DGLFNI+RLNER
Sbjct: 20  FSPDTKWAEEEHSR--ILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNER 79

Query: 89  IQINEACSLDGVHAKLLNNNLYITFPKNR 118
           I I++ CSLDGV A+L ++ L++TF K +
Sbjct: 80  ISIDDTCSLDGVFARLHDHTLFVTFSKKK 106

BLAST of CmUC08G150330 vs. NCBI nr
Match: XP_022939359.1 (uncharacterized protein LOC111445297 [Cucurbita moschata])

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-19
Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 0

Query: 29  FFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNER 88
           F PD +W E+E +    LSM LPGF K++L+I LN  TRTL VTGQK DGLFNI+RLNER
Sbjct: 20  FSPDTKWAEEEHSR--ILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNER 79

Query: 89  IQINEACSLDGVHAKLLNNNLYITFPKNR 118
           I I++ CSLDGV A+L +  L++TF K +
Sbjct: 80  ISIDDTCSLDGVFARLHDQTLFVTFSKKK 106

BLAST of CmUC08G150330 vs. NCBI nr
Match: KAG6602241.1 (hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-08
Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 0

Query: 31  PDKRWEEDEENNQMSLSMVL--PGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNER 90
           P+  W+E +E N+    M++   G S+++L+I+++   RT+ +   K +G +NI R+NE 
Sbjct: 20  PNVEWKERKETNKDYFEMIIDFSGCSRNQLQISMSRELRTIDIMTTKKEG-YNIARVNET 79

Query: 91  IQINEACSLDGVHAKLLNNNLYITFPK 116
           I I   CSLD V+A  +NN+L ITFPK
Sbjct: 80  IPIRPECSLDNVYASFVNNDLIITFPK 105

BLAST of CmUC08G150330 vs. NCBI nr
Match: XP_018475449.1 (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Raphanus sativus])

HSP 1 Score: 57.8 bits (138), Expect = 7.4e-05
Identity = 30/95 (31.58%), Postives = 51/95 (53.68%), Query Frame = 0

Query: 21  GGGLKQFQFFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLF 80
           G G++   F P   W++  E   +++   LPGF+K+++++     +R + VTG++  G  
Sbjct: 11  GLGVQYEDFVPKSEWKDQPEATVLTID--LPGFTKEQIKVTYVHTSRMIRVTGERLLGDR 70

Query: 81  NIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK 116
              R NE   + + C +D +H  L NN L IT PK
Sbjct: 71  RWSRFNEVFTVPQNCLVDKIHGSLKNNALTITMPK 103

BLAST of CmUC08G150330 vs. ExPASy TrEMBL
Match: A0A0A0KB53 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046370 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.4e-25
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 0

Query: 28  QFFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNE 87
           QFFP   +EE EE N+ S SM LPGFSKDRLRINLNTRTR ++VTGQKSDGLFNI RLNE
Sbjct: 20  QFFPSITFEESEEKNKWSFSMKLPGFSKDRLRINLNTRTRIIVVTGQKSDGLFNITRLNE 79

Query: 88  RIQINEACSLDGVHAKLLNNNLYITFPKNR 118
           R+ I E C L+GV AKL N+ L +TF K +
Sbjct: 80  RVTIKEDCLLEGVQAKLSNDTLIVTFEKEK 109

BLAST of CmUC08G150330 vs. ExPASy TrEMBL
Match: A0A6J1FGX8 (uncharacterized protein LOC111445297 OS=Cucurbita moschata OX=3662 GN=LOC111445297 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.8e-20
Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 0

Query: 29  FFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNER 88
           F PD +W E+E +    LSM LPGF K++L+I LN  TRTL VTGQK DGLFNI+RLNER
Sbjct: 20  FSPDTKWAEEEHSR--ILSMKLPGFPKNQLQITLNAATRTLTVTGQKQDGLFNIIRLNER 79

Query: 89  IQINEACSLDGVHAKLLNNNLYITFPKNR 118
           I I++ CSLDGV A+L +  L++TF K +
Sbjct: 80  ISIDDTCSLDGVFARLHDQTLFVTFSKKK 106

BLAST of CmUC08G150330 vs. ExPASy TrEMBL
Match: A0A6J0MTF1 (inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Raphanus sativus OX=3726 GN=LOC108846742 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-05
Identity = 30/95 (31.58%), Postives = 51/95 (53.68%), Query Frame = 0

Query: 21  GGGLKQFQFFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLF 80
           G G++   F P   W++  E   +++   LPGF+K+++++     +R + VTG++  G  
Sbjct: 11  GLGVQYEDFVPKSEWKDQPEATVLTID--LPGFTKEQIKVTYVHTSRMIRVTGERLLGDR 70

Query: 81  NIMRLNERIQINEACSLDGVHAKLLNNNLYITFPK 116
              R NE   + + C +D +H  L NN L IT PK
Sbjct: 71  RWSRFNEVFTVPQNCLVDKIHGSLKNNALTITMPK 103

BLAST of CmUC08G150330 vs. ExPASy TrEMBL
Match: A0A067ECS7 (SHSP domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035730mg PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.0e-04
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0

Query: 29  FFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNER 88
           F P   W ++ ENN   L + LP F+K+++RI     +R + VTG++  G     R N+ 
Sbjct: 19  FHPMSEWLDEPENN--ILLVHLPDFTKEQIRITCVRSSRIVRVTGERQLGDNKWSRCNQA 78

Query: 89  IQINEACSLDGVHAKLLNNNLYITFPK 116
             I   C +D +HAK  N  L +T PK
Sbjct: 79  FPIPSNCKIDKIHAKWNNAILTVTMPK 103

BLAST of CmUC08G150330 vs. ExPASy TrEMBL
Match: V4VZG1 (SHSP domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10016030mg PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.0e-04
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0

Query: 29  FFPDKRWEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNER 88
           F P   W ++ ENN   L + LP F+K+++RI     +R + VTG++  G     R N+ 
Sbjct: 19  FHPMSEWLDEPENN--ILLVHLPDFTKEQIRITCVRSSRIVRVTGERQLGDDKWSRCNQA 78

Query: 89  IQINEACSLDGVHAKLLNNNLYITFPK 116
             I   C +D +HAK  N  L +T PK
Sbjct: 79  FPIPSNCKIDKIHAKWNNAILTVTMPK 103

BLAST of CmUC08G150330 vs. TAIR 10
Match: AT4G27670.1 (heat shock protein 21 )

HSP 1 Score: 44.3 bits (103), Expect = 7.9e-05
Identity = 24/90 (26.67%), Postives = 49/90 (54.44%), Query Frame = 0

Query: 35  WEEDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQK----SDGLF---NIMRLNE 94
           W+  EE +++ +   +PG SK+ ++I++      L++ G++    SD  +   ++     
Sbjct: 129 WDIKEEEHEIKMRFDMPGLSKEDVKISV--EDNVLVIKGEQKKEDSDDSWSGRSVSSYGT 188

Query: 95  RIQINEACSLDGVHAKLLNNNLYITFPKNR 118
           R+Q+ + C  D + A+L N  L+IT PK +
Sbjct: 189 RLQLPDNCEKDKIKAELKNGVLFITIPKTK 216

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8646641.14.9e-2567.78hypothetical protein Csa_005322 [Cucumis sativus][more]
KAG7016359.14.8e-2059.55hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022939359.11.8e-1958.43uncharacterized protein LOC111445297 [Cucurbita moschata][more]
KAG6602241.12.5e-0840.23hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_018475449.17.4e-0531.58PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Raphanus sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KB532.4e-2567.78SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046370 PE=3 S... [more]
A0A6J1FGX88.8e-2058.43uncharacterized protein LOC111445297 OS=Cucurbita moschata OX=3662 GN=LOC1114452... [more]
A0A6J0MTF13.6e-0531.58inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Raphanus sativus OX=3726 GN=L... [more]
A0A067ECS74.0e-0435.63SHSP domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035730mg PE... [more]
V4VZG14.0e-0435.63SHSP domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10016030m... [more]
Match NameE-valueIdentityDescription
AT4G27670.17.9e-0526.67heat shock protein 21 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 27..117
e-value: 3.4E-9
score: 38.5
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 34..115
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 24..117
score: 11.986869
NoneNo IPR availableCDDcd00298ACD_sHsps_p23-likecoord: 35..115
e-value: 6.62388E-6
score: 39.4947

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC08G150330.1CmUC08G150330.1mRNA