CmUC08G149830 (gene) Watermelon (USVL531) v1

Overview
NameCmUC08G149830
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr08: 19235530 .. 19239070 (-)
RNA-Seq ExpressionCmUC08G149830
SyntenyCmUC08G149830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTTTCTCTTTGGATTATATTACCTAGGCATATCAACAATAAAGAATAAAATTCAGAAATAAATACCATATATTGTAGATTTTCTCTTGAAGATTACAAATATTGCACATATATATATCTTTAAATTTAAGAACATTTTTTGCATGTGTAGAGAGTTAGAGAAGTAAGAACAAGCAAACGCTGAGAAACTATACAGCAGGGAAAAGCAAAATTTTCAATATTGTATACGAATTTTTTTTTTCCAGAAAACCTGGGCTGTGAAGCGGGGAAGCATGAGCTTCAATATTTGTTCAAGGACTTGGGTCCCAGCTGATTCAATTGCTTGTACAGGAATTGCACGGAAGGCGAAAGGAATCTCAATGTTAACCTGGATTTCCCAGAATAAGACAATTATATTTTGTTCTTGGACAATGCACACACATTTTCTAGTGCCAATGTTGTTGAATAAAATTGCCATTACCTCGATGACAGTATCCGATGTGAGCTTCTGCAAGGGTGAGTTGCCTCGATTCACATCATAAGATATCTGGTTCACCATATAAGCTGCATTCCGACACCAAATCAATGTCAAAGCAGTCCTGAAAAAAGCATGAACCAAAAACTCAACATGATGAATGGCTGCTCTTCCAGCAAAACAACTCAGAAGTCATGGAGAGCAGCAATACTATAAGGATGCAATCTAAGGCCAAAAACTAAAAACATTCAGTAATTCTTGCTTTCCTATACTGGGTGCTAATTACTGGAATAGGCCGAGAAAGTTGCTCTCCAATTGGCCGTTCGGGCAAGTGGCAATATCAAACTAGTCAAAATCCTCCAGAAAAAGGGGGAAAAGTTCTTTATGCAGAAGTAGGATGGAGTTATGAACTTATGCAAACAAAAGTTCCATATTCAATAAACAGTCTAATAACTCTAATAATTCTTTATTCTAGCAGACTACCACTTATTTTCTGTGTAGTAAACCAAGAAATGACAACAAACTCTTCTTACAAATTACAACACATCTGAGAAAATGACAACAAATTCTTCTTACAAATTACAACACATCTGAGAAAATGACAACAAATTCTCTATTGAAATTGAATTAATGGTTATTACACGTTATGATATAGGGAAAGTGAGAAAAGACTAAGAGCAATGGACCATGGGCACAAAATCCTTCAATTTTTCATTTCGAAATTTACCTCATACATATTTTACAACAAAGAGAAAACCGTAGGAAATTTGAAGGCAGCAAATAACTCATCGTTCAGTTGCTTCCTCGGACACAAAAACATGCGGAAAGCAAGGAGAATAAGAACATGTTTGGAAGCGATTTTATTTAAAGTCACTTCTATCATGTTTAAAATCAATCCAAAACATGCACTTAACTGTTCAAAATCATTTTCGTGTTTGATTTTTACACATTTTAACGGGATTTTGTATCAAAGTGACTTTAAACCTGACAAAAATGATTCTAAACTGTTTTAAAATCACTCCCAAACGGCAAACATGCCTTAATCCATTTGGTACGAGTGTTTGATGTTTCTACACATTAGTTATGCTTATGCATAATTCAGATTCTCACCATCAAATTTATCATTCTGTGCAACCACGATTGGGGAGCCCTCAAGCTGTCCATTTAAACATGTAAAAAATAAGAACATAATAAAAAACAAGAAGTAAACTGAGCATTCAACATTCCACAAAACAAGATAAGGCAAATTAATCCAGACCTTACACGACAGCAGCTTGATACAACACCCATTAGGCTGCACTTCAACTCTAACAACCAAAACAGGGCAAACCTCAAACGCAAAGAATTTAAATCTATAAACATAACACCTAAAGGTGCAGTCATCAATCCGCTCAATCCTCTCCGCATCCAACACCGAGTATTGACTAGCCGGCAAACTCATATACTCATCTGCATCATCCAAACACAATCCCTCAAAATCAAAAACCCAAAAAAACACACATTACATGCAATCAAAAGTTCATCACATAATCCAAAACCCCTTCTAACATTACTTAGAGGCCGCGCCAACTGCCGAACCGTGACGCACTCACTCCTCCGGGCAATGAAACGCGCTTTTGGATTGGAATTCGTGGAGATCCGAAGCGAAGGCCTGGGAGAATCGTCTGCAGAGGAAGCAAGTATAAGGAATGGTCTGTGGGTGAGAGAAAAAGAAGCTCTAGGGTTTTTGCAGTGGAGGAAAATAGAAGACGGAGAGCAAAAACTCAACGCCATTAACGCGTTTGAGAATTTTGCAGAGAGGAATTGGATTATTGGAAGGGATATTGATGTTTGAGGCTTTCGGTGAAGGAAGTAATCAAGCAAAGATGGGGTGTGAGAGATGGATAAGACAATGGTAAATGAAACAACCCATTTTTTCAGCCATTGCATTGCTGTTATAAGTCTAGCCATTATTTATTTTATTTCCAAAAAAATACTTTTACTAAATTCTCCAATTACAATTTGATATACTGTGAATTCTTTTTATTATTATTATTTTTTTTGAAATATTTAAATTATTTTTTTCTACGTGGAGTGAGAGTGGGATGCATAAAAATGGGTGACGAATAATGCACTTAAATATTTCTACGTTTTTTAATGTACAACCTGCAATTATAATAAGGTGGATTCATATCTTCTTATTATGTTTGATTATATTCACAAGTAAACATGCGTGGATATAAAAATTGTAGAGATGGAGATTGGATCTTCCACCTCTAAGATGAAAGTCATAGTATTATTAACTTATTAAATTTGTTTGTCGATCCACCGAAAAGTTAGAGAAAAGTGTATAGATGCAATATACGCTAGTTATTACTTAATTATGCTTACTATAACCACCAACTATATATAAATTAAAGTATGATAATTTAAGATGACACTAAGTTTAGAGAACTCTACTACAACGTAACGTGAACATTTAATATAAATATGCATCATGCATGCATAAATAACCCGAACGCTACACACATCTATTCTATATATTCTATTCGACTCAGCCTCGCCACTCCCGACCTCCAATGGAAGCCGTCGATGGCCGCGCCACCGCCTTTATTGGTATTTCTTCTTCAATCCGACGCCAAATGCAAGTAACTGCTTATTTCTATCCAACATTTGCTTTCATGGCGTAATTTCTTCCCATCCTCCGCGTCCGGATCCGTATCCCGAACCAAATCCAGAGCCACTCCCGGTAGAACCTCCGCCCCCGCCACCTCCTCCTCCTCCTCCACCGCCTCCTTTGCCGCTCCCACTGCCATATCCGCCTCCGCTGCCGTATCCCGAGCCGTAGCCTGATCCATTTCCGCCTCCGGAACCTCCACCTCCCCCTCCTCCTCTGCCCCCACCGCCTCCGCCTCCGCCGCCTCTTCCAAACCCGGAACCGCTTCCTGATCCGAATCCAGACCCGAATCCGGATCCAGACCCTGTTCCGCCCCCACCTCCACCACCGCTTCCTCCGCCACCGCCACCGCCTCTGCCGAACGCTCCGTCGCCTTCTCCCTCATCGTATCCTTCGCCTCCGCCAGAACCAAAACCAGAACCGTAA

mRNA sequence

ATGAAAGGCCGCGCCAACTGCCGAACCGTGACGCACTCACTCCTCCGGGCAATGAAACGCGCTTTTGGATTGGAATTCGTGGAGATCCGAAGCGAAGGCCTGGGAGAATCGTCTGCAGAGGAAGCAAGTATAAGGAATGGTCTGTGGGTGAGAGAAAAAGAAGCTCTAGGGTTTTTGCAGTGGAGGAAAATAGAAGACGGAGAGCAAAAACTCAACGCCATTAACGCGTTTGAGAATTTTGCAGAGAGGAATTGGATTATTGGAAGGGATATTGATCCTCGCCACTCCCGACCTCCAATGGAAGCCGTCGATGGCCGCGCCACCGCCTTTATTGGTATTTCTTCTTCAATCCGACGCCAAATGCAACCTGATCCATTTCCGCCTCCGGAACCTCCACCTCCCCCTCCTCCTCTGCCCCCACCGCCTCCGCCTCCGCCGCCTCTTCCAAACCCGGAACCGCTTCCTGATCCGAATCCAGACCCGAATCCGGATCCAGACCCTGTTCCGCCCCCACCTCCACCACCGCTTCCTCCGCCACCGCCACCGCCTCTGCCGAACGCTCCGTCGCCTTCTCCCTCATCGTATCCTTCGCCTCCGCCAGAACCAAAACCAGAACCGTAA

Coding sequence (CDS)

ATGAAAGGCCGCGCCAACTGCCGAACCGTGACGCACTCACTCCTCCGGGCAATGAAACGCGCTTTTGGATTGGAATTCGTGGAGATCCGAAGCGAAGGCCTGGGAGAATCGTCTGCAGAGGAAGCAAGTATAAGGAATGGTCTGTGGGTGAGAGAAAAAGAAGCTCTAGGGTTTTTGCAGTGGAGGAAAATAGAAGACGGAGAGCAAAAACTCAACGCCATTAACGCGTTTGAGAATTTTGCAGAGAGGAATTGGATTATTGGAAGGGATATTGATCCTCGCCACTCCCGACCTCCAATGGAAGCCGTCGATGGCCGCGCCACCGCCTTTATTGGTATTTCTTCTTCAATCCGACGCCAAATGCAACCTGATCCATTTCCGCCTCCGGAACCTCCACCTCCCCCTCCTCCTCTGCCCCCACCGCCTCCGCCTCCGCCGCCTCTTCCAAACCCGGAACCGCTTCCTGATCCGAATCCAGACCCGAATCCGGATCCAGACCCTGTTCCGCCCCCACCTCCACCACCGCTTCCTCCGCCACCGCCACCGCCTCTGCCGAACGCTCCGTCGCCTTCTCCCTCATCGTATCCTTCGCCTCCGCCAGAACCAAAACCAGAACCGTAA

Protein sequence

MKGRANCRTVTHSLLRAMKRAFGLEFVEIRSEGLGESSAEEASIRNGLWVREKEALGFLQWRKIEDGEQKLNAINAFENFAERNWIIGRDIDPRHSRPPMEAVDGRATAFIGISSSIRRQMQPDPFPPPEPPPPPPPLPPPPPPPPPLPNPEPLPDPNPDPNPDPDPVPPPPPPPLPPPPPPPLPNAPSPSPSSYPSPPPEPKPEP
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 159..175
score: 44.71
coord: 137..158
score: 42.73
coord: 125..137
score: 52.31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC08G149830.1CmUC08G149830.1mRNA