CmUC08G148670 (gene) Watermelon (USVL531) v1

Overview
NameCmUC08G148670
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr08: 18045926 .. 18046225 (+)
RNA-Seq ExpressionCmUC08G148670
SyntenyCmUC08G148670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTATTCGACGGCCAATATTCTAATTTTGGCTATTTTGGTAGCATCCATGGCTCTAAGGCTACCGTCGGAAACCACCGCAAGCGCCGTGGCTGACCCTTCTCCTCCTCCCCCGTCGCACTTGGCATTGGCGGCGCCGATATATAATTCACCTATAAAAGTTAGCCTTAAAGGCAAAGCAGCCTCAGCAGAAGAAAATAGAGATGATGAATCTGAACCACCATTGAAGGATGAAAAGAAGGGCAGAAAACCTTGGCCAAAGCAACCTGTCTCTAAATCTCCACCGCCTCCATTTTAG

mRNA sequence

ATGGGGTATTCGACGGCCAATATTCTAATTTTGGCTATTTTGGTAGCATCCATGGCTCTAAGGCTACCGTCGGAAACCACCGCAAGCGCCGTGGCTGACCCTTCTCCTCCTCCCCCGTCGCACTTGGCATTGGCGGCGCCGATATATAATTCACCTATAAAAGTTAGCCTTAAAGGCAAAGCAGCCTCAGCAGAAGAAAATAGAGATGATGAATCTGAACCACCATTGAAGGATGAAAAGAAGGGCAGAAAACCTTGGCCAAAGCAACCTGTCTCTAAATCTCCACCGCCTCCATTTTAG

Coding sequence (CDS)

ATGGGGTATTCGACGGCCAATATTCTAATTTTGGCTATTTTGGTAGCATCCATGGCTCTAAGGCTACCGTCGGAAACCACCGCAAGCGCCGTGGCTGACCCTTCTCCTCCTCCCCCGTCGCACTTGGCATTGGCGGCGCCGATATATAATTCACCTATAAAAGTTAGCCTTAAAGGCAAAGCAGCCTCAGCAGAAGAAAATAGAGATGATGAATCTGAACCACCATTGAAGGATGAAAAGAAGGGCAGAAAACCTTGGCCAAAGCAACCTGTCTCTAAATCTCCACCGCCTCCATTTTAG

Protein sequence

MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF
Homology
BLAST of CmUC08G148670 vs. NCBI nr
Match: KAA0054914.1 (hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22702.1 hypothetical protein E5676_scaffold1163G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 1.4e-20
Identity = 66/99 (66.67%), Postives = 73/99 (73.74%), Query Frame = 0

Query: 1   MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGK 60
           MG STANILIL I VAS+ALRLPSETTA A+ADP P     L    PIYN+ +KV L  +
Sbjct: 1   MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWL----PIYNTLMKVRLNDE 60

Query: 61  AASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF 100
           A S EEN DDES+PP K+ K  RKPWPK PVSKSPPPPF
Sbjct: 61  AGSGEENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF 95

BLAST of CmUC08G148670 vs. NCBI nr
Match: KAG6578899.1 (hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 92.0 bits (227), Expect = 3.0e-15
Identity = 61/104 (58.65%), Postives = 72/104 (69.23%), Query Frame = 0

Query: 1   MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPS--HLALAAPIYNSPIKVSLK 60
           MGYSTAN+ I+ ILVAS+ALR PS TTASAV  PSP PP   H A     +   IK+SL+
Sbjct: 1   MGYSTANLFIV-ILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLE 60

Query: 61  GKAASAEENRDDESEPP---LKDEKKGRKPWPKQPVSKSPPPPF 100
           GKA    EN +DESEPP    K  +  R+PWPK+PV+KSPPPPF
Sbjct: 61  GKAGPVVENGEDESEPPPPSSKVRRGPRRPWPKKPVAKSPPPPF 103

BLAST of CmUC08G148670 vs. NCBI nr
Match: KAE8637368.1 (hypothetical protein CSA_004461, partial [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 5.7e-14
Identity = 54/90 (60.00%), Postives = 64/90 (71.11%), Query Frame = 0

Query: 1  MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGK 60
          MG STANI+IL I VAS+ALRLP+ETTA A+ADP P     L     IYN+ +KV L  +
Sbjct: 1  MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLL----IYNTVMKVRLNDE 60

Query: 61 AASAEENRDDESEPPLKDEKKGRKPWPKQP 91
          A S E + DDES+PPLK+EK  RKPWPK P
Sbjct: 61 AGSGEGSGDDESDPPLKEEKGSRKPWPKNP 86

BLAST of CmUC08G148670 vs. NCBI nr
Match: KAE8646678.1 (hypothetical protein Csa_023589, partial [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-13
Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 0

Query: 17  SMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGKAASAEENRDDESEPPL 76
           S+ALRLP+ETTA A+ADP P     L     IYN+ +KV L  +A S E + DDES+PPL
Sbjct: 1   SIALRLPTETTARAIADPYPLSWPRLL----IYNTVMKVRLNDEAGSGEGSGDDESDPPL 60

Query: 77  KDEKKGRKPWPKQPVSKSPPPPF 100
           K+EK  RKPWPK PVSKSPPPPF
Sbjct: 61  KEEKGSRKPWPKNPVSKSPPPPF 79

BLAST of CmUC08G148670 vs. NCBI nr
Match: KAG6578898.1 (hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.7 bits (208), Expect = 4.8e-13
Identity = 57/101 (56.44%), Postives = 65/101 (64.36%), Query Frame = 0

Query: 1   MGYSTANILILAILVASMALRLPSETTASAVADPS--PPPPSHLALAAPIYNSPIKVSLK 60
           MGYSTAN L+  ILVAS+ALRLP E  ASA+  PS  PPP  H      ++  PIKVSL 
Sbjct: 1   MGYSTAN-LMFGILVASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLT 60

Query: 61  GKAASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF 100
            KA+      D+   P  KDEK  RKPWPKQPV K+PPPPF
Sbjct: 61  VKAS----GEDEAEAPSSKDEKGRRKPWPKQPVPKAPPPPF 96

BLAST of CmUC08G148670 vs. ExPASy TrEMBL
Match: A0A5A7UIB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00190 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.7e-21
Identity = 66/99 (66.67%), Postives = 73/99 (73.74%), Query Frame = 0

Query: 1   MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGK 60
           MG STANILIL I VAS+ALRLPSETTA A+ADP P     L    PIYN+ +KV L  +
Sbjct: 1   MGCSTANILILTIFVASIALRLPSETTARAIADPYPLSWPWL----PIYNTLMKVRLNDE 60

Query: 61  AASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF 100
           A S EEN DDES+PP K+ K  RKPWPK PVSKSPPPPF
Sbjct: 61  AGSGEENGDDESDPPSKEAKSSRKPWPKNPVSKSPPPPF 95

BLAST of CmUC08G148670 vs. ExPASy TrEMBL
Match: A0A0A0K9K2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058720 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.2e-19
Identity = 63/99 (63.64%), Postives = 73/99 (73.74%), Query Frame = 0

Query: 1   MGYSTANILILAILVASMALRLPSETTASAVADPSPPPPSHLALAAPIYNSPIKVSLKGK 60
           MG STANI+IL I VAS+ALRLP+ETTA A+ADP P     L     IYN+ +KV L  +
Sbjct: 1   MGCSTANIVILTIFVASIALRLPTETTARAIADPYPLSWPRLL----IYNTVMKVRLNDE 60

Query: 61  AASAEENRDDESEPPLKDEKKGRKPWPKQPVSKSPPPPF 100
           A S E + DDES+PPLK+EK  RKPWPK PVSKSPPPPF
Sbjct: 61  AGSGEGSGDDESDPPLKEEKGSRKPWPKNPVSKSPPPPF 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0054914.11.4e-2066.67hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22... [more]
KAG6578899.13.0e-1558.65hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8637368.15.7e-1460.00hypothetical protein CSA_004461, partial [Cucumis sativus][more]
KAE8646678.11.3e-1361.45hypothetical protein Csa_023589, partial [Cucumis sativus][more]
KAG6578898.14.8e-1356.44hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UIB86.7e-2166.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K9K22.2e-1963.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058720 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC08G148670.1CmUC08G148670.1mRNA