CmUC08G144390 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G144390
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	CmU531Chr08: 3779975 .. 3782696 (-)
RNA-Seq Expression	CmUC08G144390
Synteny	CmUC08G144390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTTTTGTTAGGATAGCTCACGTTATCCAAATCACTCAATCGGAGAGACCAACTTAAAGACCACATCTGCCACGTCCCCATACTCCACCAATCAAAACATTGCATTGGATTTCTCAGCTTATGAGCAAAATCACAAACCTGAATCCGACGTGGCATGTCCACATCCACCAGAACCAACCATATAGCTTCTACATTCTCCACATCTAATCTTCACCATTTGCACAATTTCTATTCTTTCCTTCATCATTCATTCCCTCCGGCCATGGCTTCTTTGGCAGCCTCCACCGCCGCCGCCTCCCTTGGCGTCTCCGAAATGCTGAGAAATCCTCTCAGCTTCTCCGGTGCCTCCGCTAGGTCAGCTCCCTCTGCTTCTAGCCCAGCTACCTTCAAAACCCTTGCGCTTTTCGGGAAGAAGCCTGCCGCACCATCCAAGCCAAAGCCCTCTGCCGTCTCCCCAGTCAACGACGAGCTCGCCAAGTGGTATGGTAAGTTCAATTTCCCCCTTCAGATTTTTCCAAATTAATACAAGTTTATACTAGTTAAACTATATTTATGTTACCGTTTTGGTTACGGTGGTTAGTAAGTTTTAGTTTTATGTCGTGCATCTCCCTGTCAAACTTCTATTCATAAAAGTAAAATTCTACACCAAATTTGCTCTTTGTAATATTGAATTATTTTAAGAATTTGATTTATTTTTTATTTCGTATTTCTAGTTAAATTAATTTCTTGTTCTAGTTCAACAATTGCGAGAGTAAGAAATGTGATGCTTATTTTATAATAGGTACCTTAATAATGAATTAAATATTTATACATATTTTCTCAAGTCGATCTTAATTATGCTTTTCAATACTAATTAGGTCCGGACAGAAGGATTTTCTTGCCGGAAGGGCTGTTGGACCGATCGGAGATCCCTGAGTATTTGAACGGAGAAGTCCCCGGCGAGTATGGTTTAATTTTTCTTGTCCTAATCTTTATAGTTCTCAGTTTGCGTTCCAAAGAAAAGTGAACTCACACATTGTTTTATTTGGTTAATTACAGCTATGGTTACGATCCCTTTGGACTCAGCAAGAAGCCAGAGGACTTCAGCAAGTAAATAAATCTCTATTAATCTACAAAACAAAGACTGATTTGTTCAATAATTATATGAAGGCTTAGTGAAAGAGTTGTTTTTTATTTTGTTTTCTTGGCAGATACCAAGCGTTTGAGTTGATTCATGCAAGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGAGCCAACTGCGGTCCCGAGGCTGTCTGGTTCAAGGTCGATTTTCATCTCTATTTAGGTTACATTTGATAATGTTGTTAATTTTTCACCTCTTAAAAACATATTTAATAGTTTAGTTTAATATTGGGCCATAATAATTTTAATTTCACTTTTGATTTTCTGTTTTTGAAAATTGATGCTTGTTTCCTTTCCTTCTGATTTTTTTACCATGCTTTTCAACTTCCTTAAAGAAACATTTTAGTTTGTAGTCAAATTTTAAACATGAAAACAAGTTTTTAAAAATTAATTGTATAGCTTGGTTTTAAAAATATAAGTAGAAAATTTAAAAAAAAATTATAGATAAAATAGTGTTTATAAGCTTAATTTTCAAAAACAAAAAAATCTAAGGCTTTCTTTGATAACTATTTGATTTTTGGGGTTTGGGTTTTGAAAATTATGCGTATAGAGGCTACTCTCACCCATAAATTCCTATGTTTTGTTATTCACTATCTACTCATGTATTAAAAAACTAAGCGAAATTTTAAAAACTAAAAAAAGAAAAAAGAAAAGAAAAAAATCAGTTTTAAAAAACTTGTTTGTTTTTAGAATTTGGCTAGGAATTTAAATGTTTTTTTTTTAATATTGATGAAAATCATAATAGTGAAATAGAAATGAACAAACATAAATATAAAAAACTAAAAACTAAAAACGAAACGGTTACCAAAAGTGGCCTAAATAGTTATCAAAATAGAAAAAAATGAGATCTAATTTGTATTTGAATTATTGGCTATACAGACTGGAGCTCTGCTTCTTGATGGAAATACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCGGTCATTGCTGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAATGGCTTGGTATGTATACTTTGTGATAACTTTACATGATTTCAAAGTAAGAAATCTTCTATTTTAATTAAAGTCTTGTAATGATATTGTCTCATATGTTAATATTGAAGATCATTTATGTTGAGCTAAACAAGTGATCAGATGAAAAATACTTCTTTACTAACGAGTTTCTATTGTTCATCACTAAGTTTTTTTTTTTACCTCTTTAAGTTGTGTCAAAAACTTAATAAGTTCAAGCTTTTGAGTTCAATGTTAAGATAACAGATGTTACCGTTTTGTAGAACTTTGAGGACAAGCTTCACCCCGGAGGGCCGTTCGACCCATTGGGGTTAGCAGACGACCCGGACCAAGCAGCGATTTTGAAGGTGAAGGAGATCAAGAATGGGAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCTGAAAGAGTTCCAACTCTTTAA

mRNA sequence

ATGGTTGATAGCTCACGTTATCCAAATCACTCAATCGGAGAGACCAACTTAAAGACCACATCTGCCACGTCCCCATACTCCACCAATCAAAACATTGCATTGGATTTCTCAGCTTATGAGCAAAATCACAAACCTGAATCCGACGTGGCATCCTCCACCGCCGCCGCCTCCCTTGGCGTCTCCGAAATGCTGAGAAATCCTCTCAGCTTCTCCGGTGCCTCCGCTAGGTCAGCTCCCTCTGCTTCTAGCCCAGCTACCTTCAAAACCCTTGCGCTTTTCGGGAAGAAGCCTGCCGCACCATCCAAGCCAAAGCCCTCTGCCGTCTCCCCAGTCAACGACGAGCTCGCCAAGTGGTATGGTCCGGACAGAAGGATTTTCTTGCCGGAAGGGCTGTTGGACCGATCGGAGATCCCTGAGTATTTGAACGGAGAAGTCCCCGGCGACTATGGTTACGATCCCTTTGGACTCAGCAAGAAGCCAGAGGACTTCAGCAAATACCAAGCGTTTGAGTTGATTCATGCAAGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGAGCCAACTGCGGTCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAATACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCGGTCATTGCTGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAATGGCTTGAACTTTGAGGACAAGCTTCACCCCGGAGGGCCGTTCGACCCATTGGGGTTAGCAGACGACCCGGACCAAGCAGCGATTTTGAAGGTGAAGGAGATCAAGAATGGGAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCTGAAAGAGTTCCAACTCTTTAA

Coding sequence (CDS)

ATGGTTGATAGCTCACGTTATCCAAATCACTCAATCGGAGAGACCAACTTAAAGACCACATCTGCCACGTCCCCATACTCCACCAATCAAAACATTGCATTGGATTTCTCAGCTTATGAGCAAAATCACAAACCTGAATCCGACGTGGCATCCTCCACCGCCGCCGCCTCCCTTGGCGTCTCCGAAATGCTGAGAAATCCTCTCAGCTTCTCCGGTGCCTCCGCTAGGTCAGCTCCCTCTGCTTCTAGCCCAGCTACCTTCAAAACCCTTGCGCTTTTCGGGAAGAAGCCTGCCGCACCATCCAAGCCAAAGCCCTCTGCCGTCTCCCCAGTCAACGACGAGCTCGCCAAGTGGTATGGTCCGGACAGAAGGATTTTCTTGCCGGAAGGGCTGTTGGACCGATCGGAGATCCCTGAGTATTTGAACGGAGAAGTCCCCGGCGACTATGGTTACGATCCCTTTGGACTCAGCAAGAAGCCAGAGGACTTCAGCAAATACCAAGCGTTTGAGTTGATTCATGCAAGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGAGCCAACTGCGGTCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAATACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCGGTCATTGCTGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAATGGCTTGAACTTTGAGGACAAGCTTCACCCCGGAGGGCCGTTCGACCCATTGGGGTTAGCAGACGACCCGGACCAAGCAGCGATTTTGAAGGTGAAGGAGATCAAGAATGGGAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCTGAAAGAGTTCCAACTCTTTAA

Protein sequence

MVDSSRYPNHSIGETNLKTTSATSPYSTNQNIALDFSAYEQNHKPESDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

Homology

[Close]

BLAST of CmUC08G144390 vs. NCBI nr
Match: XP_038889943.1 (chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida])

HSP 1 Score: 578.2 bits (1489), Expect = 4.7e-161
Identity = 284/290 (97.93%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKT+ALFGKKPAAPSKPKPS
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPS 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
           AVSPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY
Sbjct: 62  AVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 291

[Close]

BLAST of CmUC08G144390 vs. NCBI nr
Match: XP_004141516.1 (chlorophyll a-b binding protein CP26, chloroplastic [Cucumis sativus] >KGN52596.1 hypothetical protein Csa_009413 [Cucumis sativus])

HSP 1 Score: 560.1 bits (1442), Expect = 1.3e-155
Identity = 275/290 (94.83%), Postives = 284/290 (97.93%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLSF   S+RSAPS S+PATFKT+ALFGKKPAAP+KPKPS
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPS 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
           A SPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDF+KY
Sbjct: 62  AASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 288

[Close]

BLAST of CmUC08G144390 vs. NCBI nr
Match: XP_008459494.1 (PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Cucumis melo])

HSP 1 Score: 559.3 bits (1440), Expect = 2.3e-155
Identity = 276/290 (95.17%), Postives = 282/290 (97.24%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLSFS  SA   PSASSPATFKT+ALFGKKPAAPSKPKP+
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPA 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
             SPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY
Sbjct: 62  PASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 289

[Close]

BLAST of CmUC08G144390 vs. NCBI nr
Match: XP_022973438.1 (chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima])

HSP 1 Score: 557.4 bits (1435), Expect = 8.6e-155
Identity = 274/290 (94.48%), Postives = 281/290 (96.90%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLS SGASARSA SASSP T K +A+FGKKPAA  KPKPS
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSLSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPS 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
           AVSPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY
Sbjct: 62  AVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAV+AEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVVAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL 291

[Close]

BLAST of CmUC08G144390 vs. NCBI nr
Match: KAG7037190.1 (Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 556.6 bits (1433), Expect = 1.5e-154
Identity = 274/290 (94.48%), Postives = 280/290 (96.55%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLSFSGASARSA SASSP T K +A+FGKKPAA  KPKPS
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPS 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
           AVSP NDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY
Sbjct: 62  AVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAV AEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVAAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL 291

[Close]

BLAST of CmUC08G144390 vs. ExPASy Swiss-Prot
Match: Q9XF89 (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB5 PE=1 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.4e-136
Identity = 237/281 (84.34%), Postives = 255/281 (90.75%), Query Frame = 0


Query: 56  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPSAVSPVNDEL 115
           ASLGVSEML  PL+F   S  SAP ASSP+TFKT+ALF KK  AP+K K  AVS  +DEL
Sbjct: 2   ASLGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSK--AVSETSDEL 61

Query: 116 AKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHAR 175
           AKWYGPDRRIFLP+GLLDRSEIPEYLNGEV GDYGYDPFGL KKPE+F+KYQAFELIHAR
Sbjct: 62  AKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHAR 121

Query: 176 WAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEV 235
           WAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEV
Sbjct: 122 WAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEV 181

Query: 236 VLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF 295
           VL+GGAEYYRI NGL+FEDKLHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF
Sbjct: 182 VLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGF 241

Query: 296 YFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           + QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Sbjct: 242 FIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280

[Close]

BLAST of CmUC08G144390 vs. ExPASy Swiss-Prot
Match: P12330 (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CAB1R PE=2 SV=2)

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-57
Identity = 135/256 (52.73%), Postives = 162/256 (63.28%), Query Frame = 0


Query: 71  SGASARSAPSASSPATFKTLALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEG 130
           S   AR+APS SS A F    +  +K AA  KP  S+ SP       WYG DR ++L  G
Sbjct: 10  SPVMARAAPSTSS-ALFGEARITMRKTAAKPKPAASSGSP-------WYGADRVLYL--G 69

Query: 131 LLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAF 190
            L   E P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G + PE  
Sbjct: 70  PLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 129

Query: 191 NKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII 250
            + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YRI 
Sbjct: 130 ARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIA 189

Query: 251 NGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEG 310
            G   E  D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+G
Sbjct: 190 GGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 249

Query: 311 PVENLAKHLSDPFGNN 322
           P+ENLA HL+DP  NN
Sbjct: 250 PLENLADHLADPVNNN 253

[Close]

BLAST of CmUC08G144390 vs. ExPASy Swiss-Prot
Match: P27517 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta OX=3047 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.5e-56
Identity = 118/238 (49.58%), Postives = 150/238 (63.03%), Query Frame = 0


Query: 90  LALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDY 149
           +A  G K     + +   ++ V     ++YGPDR  FL  G    ++ PEYL GE PGDY
Sbjct: 5   IARSGLKALNIRQTRQQRMATVPRAAVEFYGPDRAKFL--GPFSENDTPEYLTGEFPGDY 64

Query: 150 GYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL 209
           G+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE  +++      E VWFK GA 
Sbjct: 65  GWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQ 124

Query: 210 LLDGNTLNYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPF 269
           +     LNY GN   I   ++I  +  +VVL+G AE YR   G    L+  D L+PGGPF
Sbjct: 125 IFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPF 184

Query: 270 DPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGN 321
           DPLGLADDPD  A LKVKEIKNGRLAMF+ LGF+ QA VTG+GPV+NL  HL+DP  N
Sbjct: 185 DPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVN 240

[Close]

BLAST of CmUC08G144390 vs. ExPASy Swiss-Prot
Match: P27497 (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 9.5e-56
Identity = 130/262 (49.62%), Postives = 163/262 (62.21%), Query Frame = 0


Query: 71  SGASARSAPSASSPATFKTLALFG------KKPAAPSKPKPSAVSPVNDELAKWYGPDRR 130
           S   A S+ + +  A     +LFG      +K AA +KP  S+ SP       WYGPDR 
Sbjct: 3   SSTMALSSTAFAGKAVNVPSSLFGEARVTMRKTAAKAKPAASSGSP-------WYGPDRV 62

Query: 131 IFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGF 190
           ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G 
Sbjct: 63  LYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 122

Query: 191 IIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGA 250
           + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  
Sbjct: 123 VFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAI 182

Query: 251 EYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQA 310
           E YR+  G   E  D L+PGG FDPLGLADDP+  A +KVKE+KNGRLAMF+M GF+ QA
Sbjct: 183 EGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQA 242

Query: 311 YVTGEGPVENLAKHLSDPFGNN 322
            VTG+GP+ENLA HL+DP  NN
Sbjct: 243 IVTGKGPLENLADHLADPVNNN 253

[Close]

BLAST of CmUC08G144390 vs. ExPASy Swiss-Prot
Match: P27490 (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum OX=3888 GN=CAB8 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.8e-55
Identity = 122/236 (51.69%), Postives = 150/236 (63.56%), Query Frame = 0


Query: 91  ALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYG 150
           A F  + +A +K   S+ SP       WYGPDR  +L        E P YL GE PGDYG
Sbjct: 32  ARFTMRKSATTKKVASSGSP-------WYGPDRVKYLGP---FSGESPSYLTGEFPGDYG 91

Query: 151 YDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL 210
           +D  GLS  PE FSK +  E+IH+RWAMLGA G + PE  ++ G   G EAVWFK G+ +
Sbjct: 92  WDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQI 151

Query: 211 LDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPL 270
                L+Y GN   +    I+A+ A +V+L+G  E YRI  G   E  D L+PGG FDPL
Sbjct: 152 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPL 211

Query: 271 GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN 322
           GLADDP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HLSDP  NN
Sbjct: 212 GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 256

[Close]

BLAST of CmUC08G144390 vs. ExPASy TrEMBL
Match: A0A0A0KXR5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G646700 PE=3 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 6.4e-156
Identity = 275/290 (94.83%), Postives = 284/290 (97.93%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLSF   S+RSAPS S+PATFKT+ALFGKKPAAP+KPKPS
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSF---SSRSAPSPSTPATFKTVALFGKKPAAPAKPKPS 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
           A SPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDF+KY
Sbjct: 62  AASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 288

[Close]

BLAST of CmUC08G144390 vs. ExPASy TrEMBL
Match: A0A1S3CBI9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498611 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.1e-155
Identity = 276/290 (95.17%), Postives = 282/290 (97.24%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLSFS  SA   PSASSPATFKT+ALFGKKPAAPSKPKP+
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSFSSRSA--PPSASSPATFKTVALFGKKPAAPSKPKPA 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
             SPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY
Sbjct: 62  PASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 289

[Close]

BLAST of CmUC08G144390 vs. ExPASy TrEMBL
Match: A0A6J1ID20 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471983 PE=3 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 4.1e-155
Identity = 274/290 (94.48%), Postives = 281/290 (96.90%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLS SGASARSA SASSP T K +A+FGKKPAA  KPKPS
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSLSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPS 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
           AVSPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY
Sbjct: 62  AVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAV+AEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVVAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL 291

[Close]

BLAST of CmUC08G144390 vs. ExPASy TrEMBL
Match: A0A6J1EWI5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111438899 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.6e-154
Identity = 274/290 (94.48%), Postives = 279/290 (96.21%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLSFSGASARSA SASSP T K +ALFGKKPA   KPKPS
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPS 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
           AVSP NDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY
Sbjct: 62  AVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAV AEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVAAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL 291

[Close]

BLAST of CmUC08G144390 vs. ExPASy TrEMBL
Match: A0A6J1DTI7 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022982 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 6.6e-153
Identity = 272/290 (93.79%), Postives = 279/290 (96.21%), Query Frame = 0


Query: 47  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPS 106
           + +A+STAAASLGVSEMLRNPLSF G S RSAPSASS  T KT+ALFGKKPAA +KP  +
Sbjct: 2   ASLAASTAAASLGVSEMLRNPLSFGGGSPRSAPSASSSVTVKTVALFGKKPAAKAKPS-A 61

Query: 107 AVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 166
           AVSPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY
Sbjct: 62  AVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKY 121

Query: 167 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 226
           QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN
Sbjct: 122 QAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPIN 181

Query: 227 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 286
           LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
Sbjct: 182 LIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR 241

Query: 287 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGN ERVPTL
Sbjct: 242 LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNVERVPTL 290

[Close]

BLAST of CmUC08G144390 vs. TAIR 10
Match: AT4G10340.1 (light harvesting complex of photosystem II 5 )

HSP 1 Score: 487.3 bits (1253), Expect = 1.0e-137
Identity = 237/281 (84.34%), Postives = 255/281 (90.75%), Query Frame = 0


Query: 56  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPSAVSPVNDEL 115
           ASLGVSEML  PL+F   S  SAP ASSP+TFKT+ALF KK  AP+K K  AVS  +DEL
Sbjct: 2   ASLGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSK--AVSETSDEL 61

Query: 116 AKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHAR 175
           AKWYGPDRRIFLP+GLLDRSEIPEYLNGEV GDYGYDPFGL KKPE+F+KYQAFELIHAR
Sbjct: 62  AKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHAR 121

Query: 176 WAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEV 235
           WAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEV
Sbjct: 122 WAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEV 181

Query: 236 VLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF 295
           VL+GGAEYYRI NGL+FEDKLHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF
Sbjct: 182 VLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGF 241

Query: 296 YFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 337
           + QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Sbjct: 242 FIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280

[Close]

BLAST of CmUC08G144390 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-53
Identity = 124/270 (45.93%), Postives = 163/270 (60.37%), Query Frame = 0


Query: 58  LGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPSAVSPVNDELAK 117
           +  S M  +  +F+G + + +P+AS       + +  +K  A  KPK  + SP       
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTM--RKTVA--KPKGPSGSP------- 60

Query: 118 WYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWA 177
           WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F++ +  E+IH+RWA
Sbjct: 61  WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 120

Query: 178 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-E 237
           MLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +
Sbjct: 121 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 180

Query: 238 VVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFA 297
           V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+
Sbjct: 181 VILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 240

Query: 298 MLGFYFQAYVTGEGPVENLAKHLSDPFGNN 322
           M GF+ QA VTG+GP+ENLA HL+DP  NN
Sbjct: 241 MFGFFVQAIVTGKGPIENLADHLADPVNNN 255

[Close]

BLAST of CmUC08G144390 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-53
Identity = 124/270 (45.93%), Postives = 162/270 (60.00%), Query Frame = 0


Query: 58  LGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPSAVSPVNDELAK 117
           +  S M  +  +F+G +   +P+AS       + +  +K  A  KPK  + SP       
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTM--RKTVA--KPKGPSGSP------- 60

Query: 118 WYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWA 177
           WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F++ +  E+IH+RWA
Sbjct: 61  WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 120

Query: 178 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-E 237
           MLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +
Sbjct: 121 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 180

Query: 238 VVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFA 297
           V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+
Sbjct: 181 VILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 240

Query: 298 MLGFYFQAYVTGEGPVENLAKHLSDPFGNN 322
           M GF+ QA VTG+GP+ENLA HL+DP  NN
Sbjct: 241 MFGFFVQAIVTGKGPIENLADHLADPVNNN 255

[Close]

BLAST of CmUC08G144390 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-53
Identity = 124/270 (45.93%), Postives = 162/270 (60.00%), Query Frame = 0


Query: 58  LGVSEMLRNPLSFSGASARSAPSASSPATFKTLALFGKKPAAPSKPKPSAVSPVNDELAK 117
           +  S M  +  +F+G +   +P+AS       + +  +K  A  KPK  + SP       
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTM--RKTVA--KPKGPSGSP------- 60

Query: 118 WYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWA 177
           WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F++ +  E+IH+RWA
Sbjct: 61  WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 120

Query: 178 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-E 237
           MLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +
Sbjct: 121 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 180

Query: 238 VVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFA 297
           V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+
Sbjct: 181 VILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 240

Query: 298 MLGFYFQAYVTGEGPVENLAKHLSDPFGNN 322
           M GF+ QA VTG+GP+ENLA HL+DP  NN
Sbjct: 241 MFGFFVQAIVTGKGPIENLADHLADPVNNN 255

[Close]

BLAST of CmUC08G144390 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 205.7 bits (522), Expect = 5.9e-53
Identity = 114/210 (54.29%), Postives = 138/210 (65.71%), Query Frame = 0


Query: 118 WYGPDRRIFLPEGLLDRSE-IPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARW 177
           WYGPDR    P+ L   SE  P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RW
Sbjct: 49  WYGPDR----PKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRW 108

Query: 178 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA- 237
           AMLGA G   PE  +K G   G EAVWFK G+ +     L+Y GN   I    I+A+ A 
Sbjct: 109 AMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAV 168

Query: 238 EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFA 297
           +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+
Sbjct: 169 QVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFS 228

Query: 298 MLGFYFQAYVTGEGPVENLAKHLSDPFGNN 322
           M GF+ QA VTG+GP+ENL  HL+DP  NN
Sbjct: 229 MFGFFVQAIVTGKGPIENLFDHLADPVANN 253

The following BLAST results are available for this feature:

BLAST of CmUC08G144390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889943.1	4.7e-161	97.93	chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]	[more]
XP_004141516.1	1.3e-155	94.83	chlorophyll a-b binding protein CP26, chloroplastic [Cucumis sativus] >KGN52596....	[more]
XP_008459494.1	2.3e-155	95.17	PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Cucumis melo]	[more]
XP_022973438.1	8.6e-155	94.48	chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]	[more]
KAG7037190.1	1.5e-154	94.48	Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosp...	[more]

BLAST of CmUC08G144390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF89	1.4e-136	84.34	Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
P12330	1.3e-57	52.73	Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica...	[more]
P27517	1.5e-56	49.58	Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella ter...	[more]
P27497	9.5e-56	49.62	Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 ...	[more]
P27490	2.8e-55	51.69	Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum OX=3888 GN=CAB...	[more]

BLAST of CmUC08G144390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXR5	6.4e-156	94.83	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A1S3CBI9	1.1e-155	95.17	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1ID20	4.1e-155	94.48	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EWI5	1.6e-154	94.48	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1DTI7	6.6e-153	93.79	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of CmUC08G144390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10340.1	1.0e-137	84.34	light harvesting complex of photosystem II 5	[more]
AT1G29930.1	2.0e-53	45.93	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	3.5e-53	45.93	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	3.5e-53	45.93	chlorophyll A/B-binding protein 2	[more]
AT2G05100.1	5.9e-53	54.29	photosystem II light harvesting complex gene 2.1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 138..299 e-value: 9.2E-46 score: 156.3
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 125..336 e-value: 2.2E-89 score: 300.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR21649:SF104	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 49..336
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 117..326
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 49..336

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G144390.1	CmUC08G144390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding