CmUC08G143060 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G143060
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	ATP synthase subunit alpha, mitochondrial
Location	CmU531Chr08: 1054658 .. 1056861 (-)
RNA-Seq Expression	CmUC08G143060
Synteny	CmUC08G143060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTCTCTCCCGGAGCTGCAAAACTAACGACTTTATTAGAAAGTCGAATTACCAACTTTTACACGAATTTTCAAGTGGATGAGATTAGTCAAGTGGTCTCAGTTGGAGATGGGATTACACGTGTTTATGGATTGAAGGAGATTCAAGCTAGGGAAATTGTGGAATTTGCCAGCCGAATTAATGTTGTTTGTTTTTTAGAATCTATCTCTTATGTTTTCTTTAGCTAAGGTTAAAACTTTTGTTTTCCAAGTTTTCTTTCTCTTATTGTAATTATTATTGCTTAATGAAGAAATGAACAATTTTCATATGTTGAGTCACTCAAAAATGAGAAATGAAGATCTATGTCTGATAGGCTATGTAATACACATACAATACTTACAAGTAGAAAATATTTTTCCAAATTAACAATGCTGGAAGCAAAAGTCAATATGATATCAAGTTTTGCAAACCTAATTGAAAAATTTGGAAAAATAAATATTATTTTGCCTAGAGGAACAAAATTTACGATTGATGCATTGTTCTCTAGTCAATAAAAAAGAAATCTACTAAGTTTTAAAGATATATGTTGTAATGGTTATCATATTGAGACTAATAGAAAGTATGAGATAGAATATCTTTATATTATATCTATTGTCTCACATGAAAAACGTATACTGGAAAAGCTACCAACTTTATCTTCTGGAATATATTATACCTATTTACGAGTAATTGATACATACACAACAATGAATATGAAGTTCATGAATCTAGATATATTTACAATTTGGTATGACTGATTGGGTCATGTAGGGTTTATAGTGATGAGAAGAATTATTGAGAATTCAGAAGATTCTTCAAGCTAATGAATTATTATGTGATGTTTGCTCCCAAAGCAAATTAATAATTAAACCATCACCAGTTTAAATTGAAACTGAATCACCTACATTTTTTGAACGAATTCATGGTAATATATGTGGACCTATTAATCCATTAAGTAGACCATTTAGATATTTTATAGTATTAATAGACGCATCCATTAGATGGTCACATGTGTGCTTATTATCAAGTTGAAACCTTCCATTGTAAGATTACTTGCTCAGATAATTAAATTAAGAGCACAATTTTCTGATCATACAATTAAAACTATTTGTCTTGATAATGCTAGTGAATTTACATCTCAAGCTTTTGATCATTATTGTATGTCAATTGGGATAAGTGTTGAACATTCTGTAGCTCATGTTCATACACAAAATGGTTTAGCATAATCATTTATAAAACATTTGCAATTAATTGCTAGATTGTTGCTTATGAAAGCTAAACTTCCTACATTTGTATAGGGTCATGCTATTTTTCATGCAGTGTCACTTATATGCATTAGGCCAATAGCTTATCATAAATACTCACCATTACAACTAGCTTATGACTATGAGCCAAATATTTCCCATCTGAGAATTTTTGGATGTGTAGTATATGTTCCAATTGCTTCACCACAATGTACTAAGATGAGTTTTCAAAGGAGGTTAGGAATATATGTGGATTTGATTCCTCGTCAATTATTTGATATCTTAAACCCCTGATGGGTGATGTATACTACACGATTTGCTGATTGTCATTTTATTTAGACAATTTTTCCAATATTACCGGGGAGGAATTAAGTTGGAAAAAGAAATTACATGGAATGCATTGTTATTGTCTCATTTAGATCCTTGTTACAAATCAATGTGAACTTGAAGTTCAGAAAATAATTCATTTGCAAAATATAGCAAATCAATTACTAGATGCATTTATAGATGCAAAGAAAGTAACTAAGTCACATATACCAGTTGCAAATGTTCCATCGAAAATTGATATCCCAACACAACAAGTTGTCAATTAATGAGTCTGGGACACCCCAGAAGCATGGTAGATCAGTGAGTTCCAAAGATAAAAATCATAAGAAAAGAAAAATAGACAATAGTAAAAAAGACTTGGTTGAGGATATAAATATTCGTGAAGAAACCTTGGACATGACTGATAGTCGAATTAGTGAAGAAGGTGAAATATCTAATGATAATAATGAGATTTCAATAAACTATGTCAGGATAGGGAAAAGATGTACCGAACGAATGTAGTTATTGACAACATTTTTGCGTATAATGTTGCTCTTGATATTATATCTGAAAATGAGAATTTTGAACCAAAATTAGTTGAAGAATGTCAACATAGAAAAGATTGGATTTAA

mRNA sequence

ATGGAATTCTCTCCCGGAGCTGCAAAACTAACGACTTTATTAGAAAGTCGAATTACCAACTTTTACACGAATTTTCAAGTGGATGAGATTAGTCAAGTGGTCTCAGTTGGAGATGGGATTACACGTGTTTATGGATTGAAGGAGATTCAAGCTAGGGAAATTGTGGAATTTGCCAGCCGAATTAATGTTATCCTTGTTACAAATCAATGTGAACTTGAAGTTCAGAAAATAATTCATTTGCAAAATATAGCAAATCAATTACTAGATGCATTTATAGATGCAAAGAAAGTAACTAAGTCACATATACCAGTTGCAAATGTTCCATCGAAAATTGATATCCCAACACAACAAAAGCATGGTAGATCAGTGAGTTCCAAAGATAAAAATCATAAGAAAAGAAAAATAGACAATAGTAAAAAAGACTTGGTTGAGGATATAAATATTCGTGAAGAAACCTTGGACATGACTGATAGTCGAATTAGTGAAGAAGTTATTGACAACATTTTTGCGTATAATGTTGCTCTTGATATTATATCTGAAAATGAGAATTTTGAACCAAAATTAGTTGAAGAATGTCAACATAGAAAAGATTGGATTTAA

Coding sequence (CDS)

ATGGAATTCTCTCCCGGAGCTGCAAAACTAACGACTTTATTAGAAAGTCGAATTACCAACTTTTACACGAATTTTCAAGTGGATGAGATTAGTCAAGTGGTCTCAGTTGGAGATGGGATTACACGTGTTTATGGATTGAAGGAGATTCAAGCTAGGGAAATTGTGGAATTTGCCAGCCGAATTAATGTTATCCTTGTTACAAATCAATGTGAACTTGAAGTTCAGAAAATAATTCATTTGCAAAATATAGCAAATCAATTACTAGATGCATTTATAGATGCAAAGAAAGTAACTAAGTCACATATACCAGTTGCAAATGTTCCATCGAAAATTGATATCCCAACACAACAAAAGCATGGTAGATCAGTGAGTTCCAAAGATAAAAATCATAAGAAAAGAAAAATAGACAATAGTAAAAAAGACTTGGTTGAGGATATAAATATTCGTGAAGAAACCTTGGACATGACTGATAGTCGAATTAGTGAAGAAGTTATTGACAACATTTTTGCGTATAATGTTGCTCTTGATATTATATCTGAAAATGAGAATTTTGAACCAAAATTAGTTGAAGAATGTCAACATAGAAAAGATTGGATTTAA

Protein sequence

MEFSPGAAKLTTLLESRITNFYTNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRINVILVTNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQKHGRSVSSKDKNHKKRKIDNSKKDLVEDINIREETLDMTDSRISEEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDWI

Homology

[Close]

BLAST of CmUC08G143060 vs. NCBI nr
Match: AQY61299.1 (Pol [Coffea canephora])

HSP 1 Score: 129.0 bits (323), Expect = 4.5e-26
Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P +Q         
Sbjct: 475 TKECELEVQRIIHLQKIANQLPDAFNDSKRVTKSHIPAENAPIKIDVPEEQITSANESKA 534

Query: 127 --KHGRSVSSKDKN-HKKRKIDNS--------------KKDLVEDINIREETLDMTDSRI 186
             K GR + SKDKN  KKR ID S              K+ ++E+    E +++   SR 
Sbjct: 535 RLKRGRPLGSKDKNPRKKRGIDESTISDKIQPPEEVAPKEPILEENETIENSINFVTSRK 594

Query: 187 S----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW 199
           S    E +IDNIFAYN+ALDI++E+E+ EP+ V+EC+ R DW
Sbjct: 595 SWNRKEIIIDNIFAYNIALDIMAEDEDHEPRSVDECRGRNDW 636

[Close]

BLAST of CmUC08G143060 vs. NCBI nr
Match: AQY61300.1 (Pol [Coffea eugenioides])

HSP 1 Score: 128.6 bits (322), Expect = 5.8e-26
Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P  Q         
Sbjct: 475 TKECELEVQRIIHLQKIANQLPDAFNDSKRVTKSHIPAENAPIKIDVPEGQITSANESKA 534

Query: 127 --KHGRSVSSKDKN-HKKRKIDNS--------------KKDLVEDINIREETLDMTDSRI 186
             K GR + SKDKN  KKR +D S              K+ ++E+  I E +++   S+ 
Sbjct: 535 RLKRGRPLGSKDKNPRKKRGVDESTISDKIQPPEEVAPKEPILEENEIMENSINFVTSKK 594

Query: 187 S----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW 199
           S    E +IDNIFAYN+ALDI++E+E+ EP+ V+EC+ R DW
Sbjct: 595 SWNRKEIIIDNIFAYNIALDIMAEDEDHEPRSVDECRGRNDW 636

[Close]

BLAST of CmUC08G143060 vs. NCBI nr
Match: AQY61295.1 (Pol [Coffea arabica])

HSP 1 Score: 125.9 bits (315), Expect = 3.8e-25
Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P +Q         
Sbjct: 475 TKECELEVQRIIHLQKIANQLPDAFNDSKRVTKSHIPAENAPIKIDVPEEQITSANESKA 534

Query: 127 --KHGRSVSSKDKN-HKKRKIDNS--------------KKDLVEDINIREETLDMTDSRI 186
             K GR + SKDKN  KKR+ID S              K+ ++E+    E +++   SR 
Sbjct: 535 RLKRGRPLGSKDKNPRKKREIDESTISDKIQPPEEVAPKEPILEENETIENSINFITSRK 594

Query: 187 S----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW 199
           S    E +IDNIFAYN+ALDI++E+E+ E + V+EC+ R DW
Sbjct: 595 SWNRKEIIIDNIFAYNIALDIMAEDEDHELRSVDECRGRNDW 636

[Close]

BLAST of CmUC08G143060 vs. NCBI nr
Match: PIN26225.1 (hypothetical protein CDL12_01027 [Handroanthus impetiginosus])

HSP 1 Score: 121.3 bits (303), Expect = 9.3e-24
Identity = 77/170 (45.29%), Postives = 97/170 (57.06%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           T QCELEVQKIIHLQNIANQL DAF D  +VTKSHIPV N P +IDIP  Q         
Sbjct: 72  TKQCELEVQKIIHLQNIANQLPDAFTDLPRVTKSHIPVVNAPIRIDIPGGQSNSANESKP 131

Query: 127 --KHGRSVSSKDKNHKKRKIDNSKKDLVEDINIRE----------ETLDMTDSRISEE-- 186
             K GR + SKDKN +KRK  N    ++E   + E          E + + +S  +EE  
Sbjct: 132 RLKRGRPIGSKDKNPRKRKGANQDGHIMEAGPLEEVQDIANHKTPEEVQVPESNDNEEIS 191

Query: 187 ---------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW 199
                          V+DN FAY +A++I+ ++E+FEPK VEEC+ R DW
Sbjct: 192 ISYVNTEKIWNRKDIVVDNNFAYYIAVEIMKQDEDFEPKSVEECKQRNDW 241

[Close]

BLAST of CmUC08G143060 vs. NCBI nr
Match: RVW81532.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-23
Identity = 77/185 (41.62%), Postives = 101/185 (54.59%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           TNQCELEVQ+IIHLQN+ANQLLDAFID KKVTKSHIP AN P++ID+P +Q         
Sbjct: 175 TNQCELEVQRIIHLQNLANQLLDAFIDTKKVTKSHIPTANTPARIDVPVRQLTNESKIRL 234

Query: 127 KHGRSVSSKDKNHKKRKIDN-----------------SKKDLVEDINIREETLDMT---- 186
           K GR V S D   +KR+                     K   +E+  I ++TL+ T    
Sbjct: 235 KRGRPVGSNDVTPRKRRTQEKLGTLEETIKMTDQFKIDKSIALEEAQIMQKTLEETYIEQ 294

Query: 187 ----DSRISEE-------------------VIDNIFAYNVALDIISENENFEPKLVEECQ 199
               ++++ E                    VI+NIF++ VA DII  +E+ EP+ VEEC+
Sbjct: 295 EAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFSFQVASDIIRNDEDPEPRNVEECR 354

[Close]

BLAST of CmUC08G143060 vs. ExPASy Swiss-Prot
Match: P05492 (ATP synthase subunit alpha, mitochondrial OS=Oenothera biennis OX=3942 GN=ATPA PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MEFSPGAAKLTTLLESRITNFYTNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASR 60
          MEFSP AA+LTTLLESRITNFYTNFQVDEI +V+SVGDGI RVYGL EIQA E+VEFAS 
Sbjct: 1  MEFSPRAAELTTLLESRITNFYTNFQVDEIGRVISVGDGIARVYGLNEIQAGEMVEFASG 60

Query: 61 INVILVTNQCE 72
          +  I +  + E
Sbjct: 61 VKGIALNLENE 71

[Close]

BLAST of CmUC08G143060 vs. ExPASy Swiss-Prot
Match: P0C520 (ATP synthase subunit alpha, mitochondrial OS=Oryza sativa OX=4530 GN=ATPA PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-20
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MEFSPGAAKLTTLLESRITNFYTNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASR 60
          MEFSP AA+LTTLLESR+TNFYTNFQVDEI +VVSVGDGI RVYGL EIQA E+VEFAS 
Sbjct: 1  MEFSPRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASG 60

Query: 61 INVILVTNQCE 72
          +  I +  + E
Sbjct: 61 VKGIALNLENE 71

[Close]

BLAST of CmUC08G143060 vs. ExPASy Swiss-Prot
Match: P0C521 (ATP synthase subunit alpha, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=ATPA PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-20
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MEFSPGAAKLTTLLESRITNFYTNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASR 60
          MEFSP AA+LTTLLESR+TNFYTNFQVDEI +VVSVGDGI RVYGL EIQA E+VEFAS 
Sbjct: 1  MEFSPRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASG 60

Query: 61 INVILVTNQCE 72
          +  I +  + E
Sbjct: 61 VKGIALNLENE 71

[Close]

BLAST of CmUC08G143060 vs. ExPASy Swiss-Prot
Match: P0C522 (ATP synthase subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=ATPA PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-20
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MEFSPGAAKLTTLLESRITNFYTNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASR 60
          MEFSP AA+LTTLLESR+TNFYTNFQVDEI +VVSVGDGI RVYGL EIQA E+VEFAS 
Sbjct: 1  MEFSPRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASG 60

Query: 61 INVILVTNQCE 72
          +  I +  + E
Sbjct: 61 VKGIALNLENE 71

[Close]

BLAST of CmUC08G143060 vs. ExPASy Swiss-Prot
Match: P12862 (ATP synthase subunit alpha, mitochondrial OS=Triticum aestivum OX=4565 GN=ATPA PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-20
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MEFSPGAAKLTTLLESRITNFYTNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASR 60
          MEFSP AA+LTTLLESR+TNFYTNFQVDEI +VVSVGDGI RVYGL EIQA E+VEFAS 
Sbjct: 1  MEFSPRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASG 60

Query: 61 INVILVTNQCE 72
          +  I +  + E
Sbjct: 61 VKGIALNLENE 71

[Close]

BLAST of CmUC08G143060 vs. ExPASy TrEMBL
Match: A0A1U9WYD5 (Pol OS=Coffea canephora OX=49390 GN=Pol PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.2e-26
Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P +Q         
Sbjct: 475 TKECELEVQRIIHLQKIANQLPDAFNDSKRVTKSHIPAENAPIKIDVPEEQITSANESKA 534

Query: 127 --KHGRSVSSKDKN-HKKRKIDNS--------------KKDLVEDINIREETLDMTDSRI 186
             K GR + SKDKN  KKR ID S              K+ ++E+    E +++   SR 
Sbjct: 535 RLKRGRPLGSKDKNPRKKRGIDESTISDKIQPPEEVAPKEPILEENETIENSINFVTSRK 594

Query: 187 S----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW 199
           S    E +IDNIFAYN+ALDI++E+E+ EP+ V+EC+ R DW
Sbjct: 595 SWNRKEIIIDNIFAYNIALDIMAEDEDHEPRSVDECRGRNDW 636

[Close]

BLAST of CmUC08G143060 vs. ExPASy TrEMBL
Match: A0A1U9WYB0 (Pol OS=Coffea eugenioides OX=49369 GN=Pol PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.8e-26
Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P  Q         
Sbjct: 475 TKECELEVQRIIHLQKIANQLPDAFNDSKRVTKSHIPAENAPIKIDVPEGQITSANESKA 534

Query: 127 --KHGRSVSSKDKN-HKKRKIDNS--------------KKDLVEDINIREETLDMTDSRI 186
             K GR + SKDKN  KKR +D S              K+ ++E+  I E +++   S+ 
Sbjct: 535 RLKRGRPLGSKDKNPRKKRGVDESTISDKIQPPEEVAPKEPILEENEIMENSINFVTSKK 594

Query: 187 S----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW 199
           S    E +IDNIFAYN+ALDI++E+E+ EP+ V+EC+ R DW
Sbjct: 595 SWNRKEIIIDNIFAYNIALDIMAEDEDHEPRSVDECRGRNDW 636

[Close]

BLAST of CmUC08G143060 vs. ExPASy TrEMBL
Match: A0A1U9WYE0 (Pol OS=Coffea arabica OX=13443 GN=Pol PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.8e-25
Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           T +CELEVQ+IIHLQ IANQL DAF D+K+VTKSHIP  N P KID+P +Q         
Sbjct: 475 TKECELEVQRIIHLQKIANQLPDAFNDSKRVTKSHIPAENAPIKIDVPEEQITSANESKA 534

Query: 127 --KHGRSVSSKDKN-HKKRKIDNS--------------KKDLVEDINIREETLDMTDSRI 186
             K GR + SKDKN  KKR+ID S              K+ ++E+    E +++   SR 
Sbjct: 535 RLKRGRPLGSKDKNPRKKREIDESTISDKIQPPEEVAPKEPILEENETIENSINFITSRK 594

Query: 187 S----EEVIDNIFAYNVALDIISENENFEPKLVEECQHRKDW 199
           S    E +IDNIFAYN+ALDI++E+E+ E + V+EC+ R DW
Sbjct: 595 SWNRKEIIIDNIFAYNIALDIMAEDEDHELRSVDECRGRNDW 636

[Close]

BLAST of CmUC08G143060 vs. ExPASy TrEMBL
Match: A0A2G9I8Z0 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01027 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.5e-24
Identity = 77/170 (45.29%), Postives = 97/170 (57.06%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           T QCELEVQKIIHLQNIANQL DAF D  +VTKSHIPV N P +IDIP  Q         
Sbjct: 72  TKQCELEVQKIIHLQNIANQLPDAFTDLPRVTKSHIPVVNAPIRIDIPGGQSNSANESKP 131

Query: 127 --KHGRSVSSKDKNHKKRKIDNSKKDLVEDINIRE----------ETLDMTDSRISEE-- 186
             K GR + SKDKN +KRK  N    ++E   + E          E + + +S  +EE  
Sbjct: 132 RLKRGRPIGSKDKNPRKRKGANQDGHIMEAGPLEEVQDIANHKTPEEVQVPESNDNEEIS 191

Query: 187 ---------------VIDNIFAYNVALDIISENENFEPKLVEECQHRKDW 199
                          V+DN FAY +A++I+ ++E+FEPK VEEC+ R DW
Sbjct: 192 ISYVNTEKIWNRKDIVVDNNFAYYIAVEIMKQDEDFEPKSVEECKQRNDW 241

[Close]

BLAST of CmUC08G143060 vs. ExPASy TrEMBL
Match: A0A438HAQ6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_115 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-23
Identity = 77/185 (41.62%), Postives = 101/185 (54.59%), Query Frame = 0


Query: 67  TNQCELEVQKIIHLQNIANQLLDAFIDAKKVTKSHIPVANVPSKIDIPTQQ--------- 126
           TNQCELEVQ+IIHLQN+ANQLLDAFID KKVTKSHIP AN P++ID+P +Q         
Sbjct: 175 TNQCELEVQRIIHLQNLANQLLDAFIDTKKVTKSHIPTANTPARIDVPVRQLTNESKIRL 234

Query: 127 KHGRSVSSKDKNHKKRKIDN-----------------SKKDLVEDINIREETLDMT---- 186
           K GR V S D   +KR+                     K   +E+  I ++TL+ T    
Sbjct: 235 KRGRPVGSNDVTPRKRRTQEKLGTLEETIKMTDQFKIDKSIALEEAQIMQKTLEETYIEQ 294

Query: 187 ----DSRISEE-------------------VIDNIFAYNVALDIISENENFEPKLVEECQ 199
               ++++ E                    VI+NIF++ VA DII  +E+ EP+ VEEC+
Sbjct: 295 EAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFSFQVASDIIRNDEDPEPRNVEECR 354

[Close]

BLAST of CmUC08G143060 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 85.5 bits (210), Expect = 5.3e-17
Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1  MEFSPGAAKLTTLLESRITNFYTNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASR 60
          ME SP AA+LT L ESRI NFY NFQVDEI +VVSVGDGI +VYGL EIQA E+V FA+ 
Sbjct: 1  MELSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANG 60

Query: 61 I 62
          +
Sbjct: 61 V 61

[Close]

BLAST of CmUC08G143060 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 7   AAKLTTLLESRITNFYTNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEFASRI 62
           AA+LT L ESRI NFY NFQVDEI +VVSVGDGI +VYGL EIQA E+V FA+ +
Sbjct: 277 AAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGV 331

[Close]

BLAST of CmUC08G143060 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 19/51 (37.25%), Postives = 30/51 (58.82%), Query Frame = 0


Query: 7  AAKLTTLLESRITNFYTNFQVDEISQVVSVGDGITRVYGLKEIQAREIVEF 58
          A +++ ++  RI  +     +     V+ VGDGI R+YGL E+ A E+VEF
Sbjct: 6  ADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEF 56

The following BLAST results are available for this feature:

BLAST of CmUC08G143060 vs. NCBI nr


Match Name	E-value	Identity	Description
AQY61299.1	4.5e-26	48.77	Pol [Coffea canephora]	[more]
AQY61300.1	5.8e-26	48.15	Pol [Coffea eugenioides]	[more]
AQY61295.1	3.8e-25	48.15	Pol [Coffea arabica]	[more]
PIN26225.1	9.3e-24	45.29	hypothetical protein CDL12_01027 [Handroanthus impetiginosus]	[more]
RVW81532.1	4.6e-23	41.62	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of CmUC08G143060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05492	1.3e-20	73.24	ATP synthase subunit alpha, mitochondrial OS=Oenothera biennis OX=3942 GN=ATPA P...	[more]
P0C520	2.2e-20	73.24	ATP synthase subunit alpha, mitochondrial OS=Oryza sativa OX=4530 GN=ATPA PE=3 S...	[more]
P0C521	2.2e-20	73.24	ATP synthase subunit alpha, mitochondrial OS=Oryza sativa subsp. indica OX=39946...	[more]
P0C522	2.2e-20	73.24	ATP synthase subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica OX=399...	[more]
P12862	2.2e-20	73.24	ATP synthase subunit alpha, mitochondrial OS=Triticum aestivum OX=4565 GN=ATPA P...	[more]

BLAST of CmUC08G143060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U9WYD5	2.2e-26	48.77	Pol OS=Coffea canephora OX=49390 GN=Pol PE=4 SV=1	[more]
A0A1U9WYB0	2.8e-26	48.15	Pol OS=Coffea eugenioides OX=49369 GN=Pol PE=4 SV=1	[more]
A0A1U9WYE0	1.8e-25	48.15	Pol OS=Coffea arabica OX=13443 GN=Pol PE=4 SV=1	[more]
A0A2G9I8Z0	4.5e-24	45.29	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01027 P...	[more]
A0A438HAQ6	2.2e-23	41.62	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]

BLAST of CmUC08G143060 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG01190.1	5.3e-17	70.49	ATP synthase subunit 1	[more]
AT2G07698.1	1.1e-14	70.91	ATPase, F1 complex, alpha subunit protein	[more]
ATCG00120.1	2.3e-04	37.25	ATP synthase subunit alpha	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023366	ATP synthase subunit alpha, N-terminal domain-like superfamily	GENE3D	2.40.30.20		coord: 5..84 e-value: 9.5E-14 score: 52.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..136
None	No IPR available	PANTHER	PTHR48082	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 7..64
None	No IPR available	PANTHER	PTHR48082:SF2	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 7..64
IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	SUPERFAMILY	50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 12..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G143060.1	CmUC08G143060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046034	ATP metabolic process
biological_process	GO:1902600	proton transmembrane transport