CmUC07G141890 (gene) Watermelon (USVL531) v1

Overview
NameCmUC07G141890
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionDUF1336 domain-containing protein
LocationCmU531Chr07: 31063189 .. 31063515 (+)
RNA-Seq ExpressionCmUC07G141890
SyntenyCmUC07G141890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGTGACAAAGTAAATAAGCGTCGTAACGATCGAGACTTCTGGCATGCACGACGAGCGTTTTTAAAAAGCTATAACTTCTCCAATGGATATGGAAGAGATGATGGGTTGAAAGGAAAGATGAAGAGGTCGATGAAAGAGCTCAATAGATCAACTAGTCGAATGGTTGGAGGCATTTGTGAAGAGATGGCTAAAAGGAAGATTGGAATTAGGGTTTATAAGCTCACAATAGGTCTGCCATCAATGGTTTTTATGACAGTGAGATGTTTTATGCCATCATTTAGGAACAAAGCTAGAGACTACACTACACACTCATCTAGCTAG

mRNA sequence

ATGCAAAGTGACAAAGTAAATAAGCGTCGTAACGATCGAGACTTCTGGCATGCACGACGAGCGTTTTTAAAAAGCTATAACTTCTCCAATGGATATGGAAGAGATGATGGGTTGAAAGGAAAGATGAAGAGGTCGATGAAAGAGCTCAATAGATCAACTAGTCGAATGGTTGGAGGCATTTGTGAAGAGATGGCTAAAAGGAAGATTGGAATTAGGGTTTATAAGCTCACAATAGGTCTGCCATCAATGGTTTTTATGACAGTGAGATGTTTTATGCCATCATTTAGGAACAAAGCTAGAGACTACACTACACACTCATCTAGCTAG

Coding sequence (CDS)

ATGCAAAGTGACAAAGTAAATAAGCGTCGTAACGATCGAGACTTCTGGCATGCACGACGAGCGTTTTTAAAAAGCTATAACTTCTCCAATGGATATGGAAGAGATGATGGGTTGAAAGGAAAGATGAAGAGGTCGATGAAAGAGCTCAATAGATCAACTAGTCGAATGGTTGGAGGCATTTGTGAAGAGATGGCTAAAAGGAAGATTGGAATTAGGGTTTATAAGCTCACAATAGGTCTGCCATCAATGGTTTTTATGACAGTGAGATGTTTTATGCCATCATTTAGGAACAAAGCTAGAGACTACACTACACACTCATCTAGCTAG

Protein sequence

MQSDKVNKRRNDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGICEEMAKRKIGIRVYKLTIGLPSMVFMTVRCFMPSFRNKARDYTTHSSS
Homology
BLAST of CmUC07G141890 vs. NCBI nr
Match: KGN53119.1 (hypothetical protein Csa_015375 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 4.5e-41
Identity = 85/106 (80.19%), Postives = 94/106 (88.68%), Query Frame = 0

Query: 1   MQSDKVNKRRNDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGI 60
           MQ D  N+RR+DRDFWH+R+AFLKSYN SNGY RDDGLKGKMKR+MKELNRSTSRMVGGI
Sbjct: 1   MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 60

Query: 61  CEEMAKRKIGIRVYKLTIGLPSMVFMTVRCFMPSFRNKARDYTTHS 107
           CE+MAKRK GIRVY+LTI LPSMVFMTVRCF+PSFRNK     T+S
Sbjct: 61  CEDMAKRKFGIRVYRLTISLPSMVFMTVRCFLPSFRNKENTLQTYS 106

BLAST of CmUC07G141890 vs. NCBI nr
Match: XP_030940520.1 (uncharacterized protein LOC115965432 [Quercus lobata])

HSP 1 Score: 91.7 bits (226), Expect = 4.3e-15
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0

Query: 9   RRNDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGICEEMAKRK 68
           RR+DRD+W+ARRAFL SY+FS     ++G K K++RS+KELN   + +V  I  +M+KRK
Sbjct: 43  RRHDRDYWYARRAFLNSYHFS----EENGFKYKLRRSVKELNEVATGVVTDIRRKMSKRK 102

Query: 69  IGIRVYKLTIGLPSMVFMTVRCFMP 94
           +GIRVY+ T+ L S+V +++RCF P
Sbjct: 103 LGIRVYRFTVALQSLVLLSIRCFTP 123

BLAST of CmUC07G141890 vs. NCBI nr
Match: KAB1213284.1 (hypothetical protein CJ030_MR5G009621 [Morella rubra])

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14
Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0

Query: 9   RRNDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGICEE-MAKR 68
           R + RDFW ARRAFL SY+FS      +G K K+KRS+KELN   + +VG I    M+KR
Sbjct: 35  RCHSRDFWFARRAFLSSYHFS----EQNGFKDKLKRSVKELNMVATGIVGDIRRRIMSKR 94

Query: 69  KIGIRVYKLTIGLPSMVFMTVRCFMP 94
           ++GIRVY+LT+ LPS+V +T+RCF P
Sbjct: 95  RLGIRVYRLTVALPSLVLVTIRCFTP 116

BLAST of CmUC07G141890 vs. NCBI nr
Match: XP_023920324.1 (uncharacterized protein LOC112031845 [Quercus suber])

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-14
Identity = 43/85 (50.59%), Postives = 63/85 (74.12%), Query Frame = 0

Query: 9   RRNDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGICEEMAKRK 68
           RR+DRD+W+ARRAFL SY+FS     ++G K K++ S+KELN   + +V  I  +M+KRK
Sbjct: 43  RRHDRDYWYARRAFLNSYHFS----EENGFKYKLRGSVKELNEVATGVVTDIRRKMSKRK 102

Query: 69  IGIRVYKLTIGLPSMVFMTVRCFMP 94
           +GIRVY+ T+ L S+V +++RCF P
Sbjct: 103 LGIRVYRFTVALQSLVVLSIRCFTP 123

BLAST of CmUC07G141890 vs. NCBI nr
Match: KAF3958569.1 (hypothetical protein CMV_016545 [Castanea mollissima])

HSP 1 Score: 85.1 bits (209), Expect = 4.0e-13
Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 0

Query: 11  NDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGICEEMAKRKIG 70
           +DRD+W+ARRAFL SY+FS     + G K K++RS+KELN   + +V  I  +M+ RK+G
Sbjct: 40  HDRDYWYARRAFLNSYHFS----EEKGFKYKLRRSVKELNEVATGVVTDIRRKMSNRKLG 99

Query: 71  IRVYKLTIGLPSMVFMTVRCFMP 94
           IRVY+ T+ + S+V +++RCF P
Sbjct: 100 IRVYRFTVAMQSLVLLSIRCFTP 118

BLAST of CmUC07G141890 vs. ExPASy TrEMBL
Match: A0A0A0KW75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017070 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.2e-41
Identity = 85/106 (80.19%), Postives = 94/106 (88.68%), Query Frame = 0

Query: 1   MQSDKVNKRRNDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGI 60
           MQ D  N+RR+DRDFWH+R+AFLKSYN SNGY RDDGLKGKMKR+MKELNRSTSRMVGGI
Sbjct: 1   MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 60

Query: 61  CEEMAKRKIGIRVYKLTIGLPSMVFMTVRCFMPSFRNKARDYTTHS 107
           CE+MAKRK GIRVY+LTI LPSMVFMTVRCF+PSFRNK     T+S
Sbjct: 61  CEDMAKRKFGIRVYRLTISLPSMVFMTVRCFLPSFRNKENTLQTYS 106

BLAST of CmUC07G141890 vs. ExPASy TrEMBL
Match: A0A7N2MT50 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0

Query: 9   RRNDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGICEEMAKRK 68
           RR+DRD+W+ARRAFL SY+FS     ++G K K++RS+KELN   + +V  I  +M+KRK
Sbjct: 43  RRHDRDYWYARRAFLNSYHFS----EENGFKYKLRRSVKELNEVATGVVTDIRRKMSKRK 102

Query: 69  IGIRVYKLTIGLPSMVFMTVRCFMP 94
           +GIRVY+ T+ L S+V +++RCF P
Sbjct: 103 LGIRVYRFTVALQSLVLLSIRCFTP 123

BLAST of CmUC07G141890 vs. ExPASy TrEMBL
Match: A0A6A1VKL6 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G009621 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.9e-15
Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0

Query: 9   RRNDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGICEE-MAKR 68
           R + RDFW ARRAFL SY+FS      +G K K+KRS+KELN   + +VG I    M+KR
Sbjct: 35  RCHSRDFWFARRAFLSSYHFS----EQNGFKDKLKRSVKELNMVATGIVGDIRRRIMSKR 94

Query: 69  KIGIRVYKLTIGLPSMVFMTVRCFMP 94
           ++GIRVY+LT+ LPS+V +T+RCF P
Sbjct: 95  RLGIRVYRLTVALPSLVLVTIRCFTP 116

BLAST of CmUC07G141890 vs. ExPASy TrEMBL
Match: A0A803Q2Y5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.1e-14
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 0

Query: 13  RDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGICEEMAKRKIGIR 72
           RDFW +RRAFL SY+ SN    D G KGK+KRS+KELN      +  I  ++++R+ G+R
Sbjct: 41  RDFWSSRRAFLSSYHLSNQQRADQGFKGKLKRSVKELNGVAVAALSNIRHQVSRRRFGVR 100

Query: 73  VYKLTIGLPSMVFMTVRCFMP 94
           V++LT+ LPS + ++VRCF P
Sbjct: 101 VFRLTMSLPSFLHVSVRCFTP 121

BLAST of CmUC07G141890 vs. ExPASy TrEMBL
Match: A0A6A4NZH8 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr19g0138361 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.6e-13
Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 0

Query: 1   MQSDKVNKRRNDRDFWHARRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTSRMVGGI 60
           M+ D     R   +FW+ARRAFL SY+ S     +  +K K+K+S+KE+N +   +V  I
Sbjct: 30  MELDHGGWSRRGHEFWYARRAFLNSYHLSLETNNNGSIKRKLKKSVKEINEAVMGVVLSI 89

Query: 61  CEEMAKRKIGIRVYKLTIGLPSMVFMTVRCFMP 94
              M KR++G++ Y++T+ LPS+V +T+RCFMP
Sbjct: 90  RRRMQKRRLGVKAYRVTMNLPSLVLVTMRCFMP 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN53119.14.5e-4180.19hypothetical protein Csa_015375 [Cucumis sativus][more]
XP_030940520.14.3e-1551.76uncharacterized protein LOC115965432 [Quercus lobata][more]
KAB1213284.11.6e-1454.65hypothetical protein CJ030_MR5G009621 [Morella rubra][more]
XP_023920324.13.6e-1450.59uncharacterized protein LOC112031845 [Quercus suber][more]
KAF3958569.14.0e-1348.19hypothetical protein CMV_016545 [Castanea mollissima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KW752.2e-4180.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017070 PE=4 SV=1[more]
A0A7N2MT502.1e-1551.76Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A6A1VKL67.9e-1554.65Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G009621 PE=4 SV=1[more]
A0A803Q2Y55.1e-1449.38Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6A4NZH89.6e-1341.94Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr19g0138361 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC07G141890.1CmUC07G141890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane