CmUC07G140010 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC07G140010
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Ribosomal protein-like protein
Location	CmU531Chr07: 29126370 .. 29126822 (-)
RNA-Seq Expression	CmUC07G140010
Synteny	CmUC07G140010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGAATCACATTCACCAGCGCCTCCAAATTCTCTTCCCCAAGACAACAGTACTGCAACCCCCATGACGTCTTCAGCAACCCTAAGAAGAAAGCCTCCTTCCCCACAGGAACTCATATCCCACTACGAATCCCAAGGCCTTACTTCTCATGATGCTTCAATCAAGGTAATAGAAGACCTTCAGAATGCTCTCTTCAGGATCATCTCCTCCGGCAGAGGCAAAAAGGACAAGCTTCTGGTCGAGACCTCAAGGAAGATCGATTCTACCAATAATCGTCTTGCCCTTCTCGACTTAAAGTTGGATTCCAAGCCAGGCTATGCCGAGACTTTTGCCCTAGGCTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGGCTGTGATGCCCCATGTTTTTGGGGCTCTCACCCATATTTGGAGCTCTGTTACTAATCTTACCAAGCATTCTTCTTGA

mRNA sequence

ATGGGGGAATCACATTCACCAGCGCCTCCAAATTCTCTTCCCCAAGACAACAGTACTGCAACCCCCATGACGTCTTCAGCAACCCTAAGAAGAAAGCCTCCTTCCCCACAGGAACTCATATCCCACTACGAATCCCAAGGCCTTACTTCTCATGATGCTTCAATCAAGGTAATAGAAGACCTTCAGAATGCTCTCTTCAGGATCATCTCCTCCGGCAGAGGCAAAAAGGACAAGCTTCTGGTCGAGACCTCAAGGAAGATCGATTCTACCAATAATCGTCTTGCCCTTCTCGACTTAAAGTTGGATTCCAAGCCAGGCTATGCCGAGACTTTTGCCCTAGGCTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGGCTGTGATGCCCCATGTTTTTGGGGCTCTCACCCATATTTGGAGCTCTGTTACTAATCTTACCAAGCATTCTTCTTGA

Coding sequence (CDS)

ATGGGGGAATCACATTCACCAGCGCCTCCAAATTCTCTTCCCCAAGACAACAGTACTGCAACCCCCATGACGTCTTCAGCAACCCTAAGAAGAAAGCCTCCTTCCCCACAGGAACTCATATCCCACTACGAATCCCAAGGCCTTACTTCTCATGATGCTTCAATCAAGGTAATAGAAGACCTTCAGAATGCTCTCTTCAGGATCATCTCCTCCGGCAGAGGCAAAAAGGACAAGCTTCTGGTCGAGACCTCAAGGAAGATCGATTCTACCAATAATCGTCTTGCCCTTCTCGACTTAAAGTTGGATTCCAAGCCAGGCTATGCCGAGACTTTTGCCCTAGGCTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGGCTGTGATGCCCCATGTTTTTGGGGCTCTCACCCATATTTGGAGCTCTGTTACTAATCTTACCAAGCATTCTTCTTGA

Protein sequence

MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGSVLNGIGAVMPHVFGALTHIWSSVTNLTKHSS

Homology

[Close]

BLAST of CmUC07G140010 vs. NCBI nr
Match: XP_038893730.1 (uncharacterized protein LOC120082569 [Benincasa hispida])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 139/150 (92.67%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIED 60
           MGESHS APPNSLPQDNSTA PMTSS T RRKPPSPQELISHYESQGLTSHDASIKVIED
Sbjct: 1   MGESHSSAPPNSLPQDNSTANPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIED 60

Query: 61  LQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGSV 120
           LQNALFRIISSGRGKKDKLLVETSRKID+TNNRLA+LDLKLDSKPGYAE+FALGLASGSV
Sbjct: 61  LQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLKLDSKPGYAESFALGLASGSV 120

Query: 121 LNGIGAVMPHVFGALTHIWSSVTNLTKHSS 151
           L+GIG VMPHVFGALT+IWSSV+NLTKHSS
Sbjct: 121 LSGIGTVMPHVFGALTNIWSSVSNLTKHSS 150

[Close]

BLAST of CmUC07G140010 vs. NCBI nr
Match: XP_022980748.1 (uncharacterized protein LOC111480022 [Cucurbita maxima])

HSP 1 Score: 245.4 bits (625), Expect = 3.2e-61
Identity = 127/150 (84.67%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIED 60
           M +S+SPA  NSLPQDN+TATPM SS   RRK PSPQEL+SHYESQGLTSHDASIKVIED
Sbjct: 1   MADSNSPATQNSLPQDNNTATPMASSGAQRRKLPSPQELVSHYESQGLTSHDASIKVIED 60

Query: 61  LQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGSV 120
           LQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDLKLDSKPGYA+TFALGLASGSV
Sbjct: 61  LQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDLKLDSKPGYAQTFALGLASGSV 120

Query: 121 LNGIGAVMPHVFGALTHIWSSVTNLTKHSS 151
           LNGIGAVMPHVFGAL +IWSSV+  TKHSS
Sbjct: 121 LNGIGAVMPHVFGALANIWSSVSKFTKHSS 150

[Close]

BLAST of CmUC07G140010 vs. NCBI nr
Match: XP_022955496.1 (uncharacterized protein LOC111457504 [Cucurbita moschata])

HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59
Identity = 126/151 (83.44%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSS-ATLRRKPPSPQELISHYESQGLTSHDASIKVIE 60
           M +S+SPA  NSLPQDN+TATPM SS    RRK PSPQEL+SHYESQGLTSHDASIKVIE
Sbjct: 1   MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIE 60

Query: 61  DLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGS 120
           DLQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDLKLDSKPGYA+TFALGLASGS
Sbjct: 61  DLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDLKLDSKPGYAQTFALGLASGS 120

Query: 121 VLNGIGAVMPHVFGALTHIWSSVTNLTKHSS 151
           VLNGIGAVMPHVFGA+ +IWSSV+  TKHSS
Sbjct: 121 VLNGIGAVMPHVFGAIANIWSSVSKFTKHSS 151

[Close]

BLAST of CmUC07G140010 vs. NCBI nr
Match: XP_023527033.1 (uncharacterized protein LOC111790380 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 8.8e-59
Identity = 126/151 (83.44%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSS-ATLRRKPPSPQELISHYESQGLTSHDASIKVIE 60
           M +S+SPA  NSL QDN+TATPM SS    RRK PSPQEL+SHYESQGLTSHDASIKVIE
Sbjct: 1   MADSNSPATQNSLHQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIE 60

Query: 61  DLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGS 120
           DLQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDLKLDSKPGYA+TFALGLASGS
Sbjct: 61  DLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDLKLDSKPGYAQTFALGLASGS 120

Query: 121 VLNGIGAVMPHVFGALTHIWSSVTNLTKHSS 151
           VLNGIGAVMPHVFGAL +IWSSV+  TKHSS
Sbjct: 121 VLNGIGAVMPHVFGALANIWSSVSKFTKHSS 151

[Close]

BLAST of CmUC07G140010 vs. NCBI nr
Match: XP_022148109.1 (uncharacterized protein LOC111016865 [Momordica charantia])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 123/150 (82.00%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIED 60
           MGE  SP  PNSLPQ NSTATPM+SS T RRK P+PQEL+SHYESQGL SHDASIKVIED
Sbjct: 1   MGE--SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIED 60

Query: 61  LQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGSV 120
           LQNALFRI+SSGRGKKDKLLVETS+KID+T +R+A+LDLKLDSKPGYAETFA+GLASGSV
Sbjct: 61  LQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKPGYAETFAIGLASGSV 120

Query: 121 LNGIGAVMPHVFGALTHIWSSVTNLTKHSS 151
           L G+G+VMPHVFGAL +IWSSV+N TKHSS
Sbjct: 121 LKGVGSVMPHVFGALANIWSSVSNATKHSS 148

[Close]

BLAST of CmUC07G140010 vs. ExPASy TrEMBL
Match: A0A6J1J075 (uncharacterized protein LOC111480022 OS=Cucurbita maxima OX=3661 GN=LOC111480022 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61
Identity = 127/150 (84.67%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIED 60
           M +S+SPA  NSLPQDN+TATPM SS   RRK PSPQEL+SHYESQGLTSHDASIKVIED
Sbjct: 1   MADSNSPATQNSLPQDNNTATPMASSGAQRRKLPSPQELVSHYESQGLTSHDASIKVIED 60

Query: 61  LQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGSV 120
           LQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDLKLDSKPGYA+TFALGLASGSV
Sbjct: 61  LQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDLKLDSKPGYAQTFALGLASGSV 120

Query: 121 LNGIGAVMPHVFGALTHIWSSVTNLTKHSS 151
           LNGIGAVMPHVFGAL +IWSSV+  TKHSS
Sbjct: 121 LNGIGAVMPHVFGALANIWSSVSKFTKHSS 150

[Close]

BLAST of CmUC07G140010 vs. ExPASy TrEMBL
Match: A0A6J1GTX5 (uncharacterized protein LOC111457504 OS=Cucurbita moschata OX=3662 GN=LOC111457504 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.5e-60
Identity = 126/151 (83.44%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSS-ATLRRKPPSPQELISHYESQGLTSHDASIKVIE 60
           M +S+SPA  NSLPQDN+TATPM SS    RRK PSPQEL+SHYESQGLTSHDASIKVIE
Sbjct: 1   MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIE 60

Query: 61  DLQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGS 120
           DLQNAL RIISSGRGKKDKLLV+TSRKID+TN RLA+LDLKLDSKPGYA+TFALGLASGS
Sbjct: 61  DLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDLKLDSKPGYAQTFALGLASGS 120

Query: 121 VLNGIGAVMPHVFGALTHIWSSVTNLTKHSS 151
           VLNGIGAVMPHVFGA+ +IWSSV+  TKHSS
Sbjct: 121 VLNGIGAVMPHVFGAIANIWSSVSKFTKHSS 151

[Close]

BLAST of CmUC07G140010 vs. ExPASy TrEMBL
Match: A0A6J1D308 (uncharacterized protein LOC111016865 OS=Momordica charantia OX=3673 GN=LOC111016865 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.5e-59
Identity = 123/150 (82.00%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIED 60
           MGE  SP  PNSLPQ NSTATPM+SS T RRK P+PQEL+SHYESQGL SHDASIKVIED
Sbjct: 1   MGE--SPPLPNSLPQANSTATPMSSSGTQRRKLPTPQELVSHYESQGLNSHDASIKVIED 60

Query: 61  LQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGSV 120
           LQNALFRI+SSGRGKKDKLLVETS+KID+T +R+A+LDLKLDSKPGYAETFA+GLASGSV
Sbjct: 61  LQNALFRIVSSGRGKKDKLLVETSKKIDATISRVAILDLKLDSKPGYAETFAIGLASGSV 120

Query: 121 LNGIGAVMPHVFGALTHIWSSVTNLTKHSS 151
           L G+G+VMPHVFGAL +IWSSV+N TKHSS
Sbjct: 121 LKGVGSVMPHVFGALANIWSSVSNATKHSS 148

[Close]

BLAST of CmUC07G140010 vs. ExPASy TrEMBL
Match: A0A5A7VAF7 (Putative ribosomal-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00060 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 124/149 (83.22%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIED 60
           M +S SPAPPNSLPQ     +P   S   RRKPPSPQELISHYESQG TSHDASIKVI+D
Sbjct: 1   MEDSGSPAPPNSLPQAQHNISPAVRS---RRKPPSPQELISHYESQGHTSHDASIKVIDD 60

Query: 61  LQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGSV 120
           LQNALF+IISSGRGKKDKLL+ETSRKID+TN+RLA+LDLKLDSKPGYAETFALGLASGSV
Sbjct: 61  LQNALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSV 120

Query: 121 LNGIGAVMPHVFGALTHIWSSVTNLTKHS 150
           LNG+G VMPHVFGALT+IWSSVTNLTKHS
Sbjct: 121 LNGLGTVMPHVFGALTNIWSSVTNLTKHS 146

[Close]

BLAST of CmUC07G140010 vs. ExPASy TrEMBL
Match: A0A1S4DV46 (uncharacterized protein LOC103487537 OS=Cucumis melo OX=3656 GN=LOC103487537 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 124/149 (83.22%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MGESHSPAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIED 60
           M +S SPAPPNSLPQ     +P   S   RRKPPSPQELISHYESQG TSHDASIKVI+D
Sbjct: 1   MEDSGSPAPPNSLPQAQHNISPAVRS---RRKPPSPQELISHYESQGHTSHDASIKVIDD 60

Query: 61  LQNALFRIISSGRGKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGSV 120
           LQNALF+IISSGRGKKDKLL+ETSRKID+TN+RLA+LDLKLDSKPGYAETFALGLASGSV
Sbjct: 61  LQNALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSV 120

Query: 121 LNGIGAVMPHVFGALTHIWSSVTNLTKHS 150
           LNG+G VMPHVFGALT+IWSSVTNLTKHS
Sbjct: 121 LNGLGTVMPHVFGALTNIWSSVTNLTKHS 146

[Close]

BLAST of CmUC07G140010 vs. TAIR 10
Match: AT1G16790.1 (ribosomal protein-related )

HSP 1 Score: 131.7 bits (330), Expect = 4.8e-31
Identity = 78/146 (53.42%), Postives = 99/146 (67.81%), Query Frame = 0


Query: 7   PAPPNSLPQDNSTATPMTSSATLRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALF 66
           PA PN+  +  S     +      +K P+P ELISHY+ +GL   +ASIKVIEDLQNAL 
Sbjct: 4   PATPNAAEETKSEQKQKS------KKFPTPTELISHYQKRGLEPAEASIKVIEDLQNALV 63

Query: 67  RIISSGR--GKKDKLLVETSRKIDSTNNRLALLDLKLDSKPGYAETFALGLASGSVLNGI 126
           R++SS R    KDKL+ + +RKID+ N RLA++D KL++KPGY ETFALGLASG+ LNGI
Sbjct: 64  RVVSSSRNASSKDKLVTD-ARKIDAINGRLAVVDAKLETKPGYVETFALGLASGATLNGI 123

Query: 127 GAVMPHVFGALTHIWSSVTNLTKHSS 151
            AV PHV   +  IWS+V   T  SS
Sbjct: 124 SAVWPHVTRGIGQIWSAVRIGTDPSS 142

The following BLAST results are available for this feature:

BLAST of CmUC07G140010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893730.1	1.2e-68	92.67	uncharacterized protein LOC120082569 [Benincasa hispida]	[more]
XP_022980748.1	3.2e-61	84.67	uncharacterized protein LOC111480022 [Cucurbita maxima]	[more]
XP_022955496.1	1.4e-59	83.44	uncharacterized protein LOC111457504 [Cucurbita moschata]	[more]
XP_023527033.1	8.8e-59	83.44	uncharacterized protein LOC111790380 [Cucurbita pepo subsp. pepo]	[more]
XP_022148109.1	2.0e-58	82.00	uncharacterized protein LOC111016865 [Momordica charantia]	[more]

BLAST of CmUC07G140010 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC07G140010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J075	1.6e-61	84.67	uncharacterized protein LOC111480022 OS=Cucurbita maxima OX=3661 GN=LOC111480022...	[more]
A0A6J1GTX5	6.5e-60	83.44	uncharacterized protein LOC111457504 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]
A0A6J1D308	9.5e-59	82.00	uncharacterized protein LOC111016865 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5A7VAF7	1.2e-58	83.22	Putative ribosomal-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S4DV46	1.2e-58	83.22	uncharacterized protein LOC103487537 OS=Cucumis melo OX=3656 GN=LOC103487537 PE=...	[more]

BLAST of CmUC07G140010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16790.1	4.8e-31	53.42	ribosomal protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC07G140010.1	CmUC07G140010.1	mRNA