CmUC07G136660 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAATTCAACGATTCGTTCCCTTCTGAAAGAAGTAAGCCGGAGAAGGGCCGATAATGGAAATAAGGCCTTCCTCAATTTCAAATTTCCGCCATTAAATTTCTTCTCGGAGGTCGCCCATGTCTCCGTCATCCACCGTTCTTCACTGAAGCCGCCGACCCCATAACCCTGCAATAGTATCAACCATGACCTCCAGCGCCATGCCGGCTACGGCTCAGCAACACCAATGGAGCGAGGAGGAGACGAGGGAGTTCATTCGAATTCGAGCCGACCTAGAGAAGGACCTGACGGCGGCTTCCACCGGAGAAGCTCCGGCGGCGAAGAAGAAAACACTGTGGGAGATGGCGAGTGCTAGGATGCGAGAGAAAGGGTTTTGGAGGACCGCCGATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGTTGGTCCACTTTCTGATTCGGTATTAAACTATTAACTACGAAATTTTTTGAATCTGTAATTTTAGTCTAGTTTCTTCTACATTATGTACCTTTCAAGTGGGCTCCTCTGAATCTGGACTGTACTTGCTTTGTTCTGTTGATTCTCCTGGCATTTGATGGATGGGGTTTCAATTCGCCATTTCTGGTTGCAGATTCTTGAAGTTCAATCTGGGAAAGCCAGTAAAATGTCTTGATAATGTCTCGCAATATGCGGGCGAGAACAGGACAAGAAATCTTGTTGTCTTTGTTCAAAATAGACGTGTTTTTGACCCTTCGAACTTCAAACGTATGTATTCTTTTTCCATAATTGGACTCTAGTAGAAACTAACTTCGAGATTTTTATTCTGAAACTTGCCTTCCCATCTACCATACTTTCCAACGTAACAAAAATGAAAGCTCTTCCTCTGGACCCCCAGTTTAAGTGCACCCCAAATATTTTGAATATCAAATTTTCATTGCTTTTCGGGAAAACGATCTTCAGATTTCCGAGTATATTAGTAATATGTTTGAATGGGAACTATTTTGTTGGGGAGCCTTCTTTATTATAGTTTTTTAATGGTTGATTTGCGAGAAAGGGTGGTGTTAAAGGAGCGGATGGAATTTACTAGACTAGGACATTAACTCTAAACACTAACCTTCAAGGTTGTATGGCGCTTGAAAACTTAGCGAAACAGATTTGGCTTTGATAAGGAATGACTTTGTACATTTTCCATGGAGCATAGTGTTCTTTAGCTTCCTGTAATTGCCAGTAAGTCTTCAAAAACCTCCATTTCCAGTCTTTTTATCCTCAATCTTCTTGGTTGGTTATTCCCCACGAAGTCAGGCGCCTAAGTGATAAGATGATTCTAGATTGTTACGCCTCTTGAATCTAGAAAATAGACTGTTCTTAAGTTTTCTCTTTTAAATATTTCTTGCATAATCTCTTCGTTACCAATGGGACGGTCCTCTCAATTCTAATGAACAGATCTAATAGAGGAACCTTCTTATGCATTTGCAAGATGGCTCATGCATGCGTAGATGGCAAGGATGTTATTACTCTGTCCACCGAATTTAGGACCATGTTTATAAATTAGTGCAAACTTATCGAGCAAGCTATTTGAATTAGGCATATTTTGCTTATTAGAATTTAATGTTAGTAACTGTTACTTGGTAGTGGCTTGTAATCATGAGAAGCTCAAGGTGCAATAAAGCGCGATAGTCTTTTGGGGCTTAAACACAAGATGCAAAAAAAAAGAAAGCACAAGCTTTTTTTTTTTTTGTGAAGCGCACTATATATAAAAGTACTACAGAAAGAGAAGAAAGTATAGTTGAAGTGGAAATATGAAAAAAAAAAAAAAAAAATTTAAATTTACACTTAATAAATTTGATTTTTTTTTTTGTTAATGAAGAAGGAAAACCCCTAGTTATTACTATTTTTTAAAATAATGTAAATACCCCAAGGCCCCAAGGCTTTGAGCCTTGGGGCTTCACTCAGGCATGCCTTACTTTGTGAGCTAAAGCGAGGCACCAAACTTGCGCCTTCGGACCTAGGTGCGTACCTAGGAGGGCTTTAGGGATGTGGCTTTGTGGTTTAGTGGGGTTGATCAGAGTAAAGCAGTGATGTTATTATCTTCTCCTACATTTCAGAGTTGCATCAGTGAGGGGATAAAACAGACGTAAGGCTTATGTTCCTTTTCTAGATATCTATACAGGTGTTCAGCTTCCCTAGGGCCATATGCACCAGAAGAATTGACACTTCAGTTTCCTGAAGATGTGGGATTACACGATGGGAAGAGTGGTAGAACAAGCAAGAAGGTGTAGGGAGATTTTAACGTAGATAAACCAGAAATCTTTCTTTCTAACGCTTGTTTCATGCATAAGATCATTGAACTCCTTACTGCAATATGAAGAACGGTTCATCCAGGAAATTCGCCGTTCATTAGTCAATTAGGGGAATTTCTCATTCATTAAAATATATCTTTTAAACTGAGCTCCGTCCAGCTGTCTCTCTTTCTTTAAAGTACCTTCTAAAACTAAGCTTCAAAATGAGCACTTTTCCAACATTGCAGCTCAAGCATGGAGTGTAGCAAGTGTGAGTGAACAAAAATATAATTGAACCCCCCCACCATCGCCCCTCCTCTCTTCTTTTTCAGGCGGATGGTTGAAAGAGGGGAGTTAGTCGCTTCCTGTATATGTAGTAATTTCTTACATTAATATTCGTAGAAAAAAGCATCGACATTCATGCTAAGCTTCCTTTCATGTCATTTAGGCTGAGCTTACCATAGAATTCCTATAATGAATTAGCTGGGAATTAGCTCGACTTGTCAAGTCCAACTTTGGCCCAAACATAGTGAGCTATAGATATCCCTAGAAGTTGAGGCAGTGGTTGGCAATGTTCAGTGTTGATTAATCAGTAATATGTTTCTAATGTCAAAATGTTTGTACAGGGGAAGGAGACATCTCATAAAGAGTTCGGCTGGCAATGCCCATTTTTTGAAGAAATCCATGCAGTTTTTACTGAAAGAGGAAAAGTTATGCACCGATTGCTCCTCGAACCTGAAGCATGTTCTATTGCAACAAAGAAAAGGGTGAGGGAGAGAAGTTTAGAGGAATATTCAAATCTCAAACAACTCAATGAAGACGAAACTGAGGAGGAAGTGACTCTCACTCAAAGCAACTCACAGAAGAGAAAGGCTGCAAGAACTCTCCCAGCAAAGTCTTTAGGAGCGACCGATTCTAAAAATTCTAGTAGCTCAGTTAGTAATGAAATTCTAGAAATGCTGAAGGGCTTCTTCCAGTGGCAGCAGAGGATGGAGATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGTCGATTGTTTGAGCAGGAATGGCGCGAATCAATGGAGAAGCTCGAGAGGGAGAGGTTAATGGCTGAGCAAGCTTGGAGGGAAAGGGAAGAACAGAGAAGGAAAAGGCAAGATATACGAGCTGAAGGAATGGATGCCCTCTTAACAACCCTTTTAAACAAACTCAACCGCGAAAATAATTTATGA CCAAAATTCAACGATTCGTTCCCTTCTGAAAGAAGTAAGCCGGAGAAGGGCCGATAATGGAAATAAGGCCTTCCTCAATTTCAAATTTCCGCCATTAAATTTCTTCTCGGAGGTCGCCCATGTCTCCGTCATCCACCGTTCTTCACTGAAGCCGCCGACCCCATAACCCTGCAATAGTATCAACCATGACCTCCAGCGCCATGCCGGCTACGGCTCAGCAACACCAATGGAGCGAGGAGGAGACGAGGGAGTTCATTCGAATTCGAGCCGACCTAGAGAAGGACCTGACGGCGGCTTCCACCGGAGAAGCTCCGGCGGCGAAGAAGAAAACACTGTGGGAGATGGCGAGTGCTAGGATGCGAGAGAAAGGGTTTTGGAGGACCGCCGATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGATTCTTGAAGTTCAATCTGGGAAAGCCAGTAAAATGTGTTCAGCTTCCCTAGGGCCATATGCACCAGAAGAATTGACACTTCAGTTTCCTGAAGATGTGGGATTACACGATGGGAAGAGTGGTAGAACAAGCAAGAAGGGGAAGGAGACATCTCATAAAGAGTTCGGCTGGCAATGCCCATTTTTTGAAGAAATCCATGCAGTTTTTACTGAAAGAGGAAAAGTTATGCACCGATTGCTCCTCGAACCTGAAGCATGTTCTATTGCAACAAAGAAAAGGGTGAGGGAGAGAAGTTTAGAGGAATATTCAAATCTCAAACAACTCAATGAAGACGAAACTGAGGAGGAAGTGACTCTCACTCAAAGCAACTCACAGAAGAGAAAGGCTGCAAGAACTCTCCCAGCAAAGTCTTTAGGAGCGACCGATTCTAAAAATTCTAGTAGCTCAGTTAGTAATGAAATTCTAGAAATGCTGAAGGGCTTCTTCCAGTGGCAGCAGAGGATGGAGATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGTCGATTGTTTGAGCAGGAATGGCGCGAATCAATGGAGAAGCTCGAGAGGGAGAGGTTAATGGCTGAGCAAGCTTGGAGGGAAAGGGAAGAACAGAGAAGGAAAAGGCAAGATATACGAGCTGAAGGAATGGATGCCCTCTTAACAACCCTTTTAAACAAACTCAACCGCGAAAATAATTTATGA ATGACCTCCAGCGCCATGCCGGCTACGGCTCAGCAACACCAATGGAGCGAGGAGGAGACGAGGGAGTTCATTCGAATTCGAGCCGACCTAGAGAAGGACCTGACGGCGGCTTCCACCGGAGAAGCTCCGGCGGCGAAGAAGAAAACACTGTGGGAGATGGCGAGTGCTAGGATGCGAGAGAAAGGGTTTTGGAGGACCGCCGATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGATTCTTGAAGTTCAATCTGGGAAAGCCAGTAAAATGTGTTCAGCTTCCCTAGGGCCATATGCACCAGAAGAATTGACACTTCAGTTTCCTGAAGATGTGGGATTACACGATGGGAAGAGTGGTAGAACAAGCAAGAAGGGGAAGGAGACATCTCATAAAGAGTTCGGCTGGCAATGCCCATTTTTTGAAGAAATCCATGCAGTTTTTACTGAAAGAGGAAAAGTTATGCACCGATTGCTCCTCGAACCTGAAGCATGTTCTATTGCAACAAAGAAAAGGGTGAGGGAGAGAAGTTTAGAGGAATATTCAAATCTCAAACAACTCAATGAAGACGAAACTGAGGAGGAAGTGACTCTCACTCAAAGCAACTCACAGAAGAGAAAGGCTGCAAGAACTCTCCCAGCAAAGTCTTTAGGAGCGACCGATTCTAAAAATTCTAGTAGCTCAGTTAGTAATGAAATTCTAGAAATGCTGAAGGGCTTCTTCCAGTGGCAGCAGAGGATGGAGATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGTCGATTGTTTGAGCAGGAATGGCGCGAATCAATGGAGAAGCTCGAGAGGGAGAGGTTAATGGCTGAGCAAGCTTGGAGGGAAAGGGAAGAACAGAGAAGGAAAAGGCAAGATATACGAGCTGAAGGAATGGATGCCCTCTTAACAACCCTTTTAAACAAACTCAACCGCGAAAATAATTTATGA MTSSAMPATAQQHQWSEEETREFIRIRADLEKDLTAASTGEAPAAKKKTLWEMASARMREKGFWRTADQCKCKWKNLLSRYKILEVQSGKASKMCSASLGPYAPEELTLQFPEDVGLHDGKSGRTSKKGKETSHKEFGWQCPFFEEIHAVFTERGKVMHRLLLEPEACSIATKKRVRERSLEEYSNLKQLNEDETEEEVTLTQSNSQKRKAARTLPAKSLGATDSKNSSSSVSNEILEMLKGFFQWQQRMEMEWREILERHYNNRRLFEQEWRESMEKLERERLMAEQAWREREEQRRKRQDIRAEGMDALLTTLLNKLNRENNL Homology
BLAST of CmUC07G136660 vs. NCBI nr
Match: XP_008451911.1 (PREDICTED: trihelix transcription factor GT-3b-like [Cucumis melo] >KAA0044964.1 trihelix transcription factor GT-3b-like [Cucumis melo var. makuwa] >TYK16505.1 trihelix transcription factor GT-3b-like [Cucumis melo var. makuwa]) HSP 1 Score: 462.6 bits (1189), Expect = 2.8e-126 Identity = 251/325 (77.23%), Postives = 265/325 (81.54%), Query Frame = 0
BLAST of CmUC07G136660 vs. NCBI nr
Match: XP_038900362.1 (trihelix transcription factor GT-3b-like [Benincasa hispida]) HSP 1 Score: 459.9 bits (1182), Expect = 1.8e-125 Identity = 255/325 (78.46%), Postives = 264/325 (81.23%), Query Frame = 0
BLAST of CmUC07G136660 vs. NCBI nr
Match: XP_004148982.1 (trihelix transcription factor GT-3b [Cucumis sativus] >KGN53440.1 hypothetical protein Csa_014682 [Cucumis sativus]) HSP 1 Score: 457.6 bits (1176), Expect = 8.9e-125 Identity = 248/320 (77.50%), Postives = 259/320 (80.94%), Query Frame = 0
BLAST of CmUC07G136660 vs. NCBI nr
Match: XP_022136574.1 (trihelix transcription factor GT-3b-like [Momordica charantia]) HSP 1 Score: 429.5 bits (1103), Expect = 2.6e-116 Identity = 240/326 (73.62%), Postives = 257/326 (78.83%), Query Frame = 0
BLAST of CmUC07G136660 vs. NCBI nr
Match: XP_022982252.1 (trihelix transcription factor GT-3b-like [Cucurbita maxima]) HSP 1 Score: 419.5 bits (1077), Expect = 2.7e-113 Identity = 235/325 (72.31%), Postives = 252/325 (77.54%), Query Frame = 0
BLAST of CmUC07G136660 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 5.1e-30 Identity = 106/313 (33.87%), Postives = 158/313 (50.48%), Query Frame = 0
BLAST of CmUC07G136660 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.6e-26 Identity = 97/320 (30.31%), Postives = 153/320 (47.81%), Query Frame = 0
BLAST of CmUC07G136660 vs. ExPASy Swiss-Prot
Match: Q9LU92 (Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.9e-07 Identity = 34/124 (27.42%), Postives = 58/124 (46.77%), Query Frame = 0
BLAST of CmUC07G136660 vs. ExPASy TrEMBL
Match: A0A5D3CYD0 (Trihelix transcription factor GT-3b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003130 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.3e-126 Identity = 251/325 (77.23%), Postives = 265/325 (81.54%), Query Frame = 0
BLAST of CmUC07G136660 vs. ExPASy TrEMBL
Match: A0A1S3BSN5 (trihelix transcription factor GT-3b-like OS=Cucumis melo OX=3656 GN=LOC103493063 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.3e-126 Identity = 251/325 (77.23%), Postives = 265/325 (81.54%), Query Frame = 0
BLAST of CmUC07G136660 vs. ExPASy TrEMBL
Match: A0A0A0KV13 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G055350 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 4.3e-125 Identity = 248/320 (77.50%), Postives = 259/320 (80.94%), Query Frame = 0
BLAST of CmUC07G136660 vs. ExPASy TrEMBL
Match: A0A6J1C4P6 (trihelix transcription factor GT-3b-like OS=Momordica charantia OX=3673 GN=LOC111008249 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 1.3e-116 Identity = 240/326 (73.62%), Postives = 257/326 (78.83%), Query Frame = 0
BLAST of CmUC07G136660 vs. ExPASy TrEMBL
Match: A0A6J1IW60 (trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC111481131 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 1.3e-113 Identity = 235/325 (72.31%), Postives = 252/325 (77.54%), Query Frame = 0
BLAST of CmUC07G136660 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 133.3 bits (334), Expect = 3.6e-31 Identity = 106/313 (33.87%), Postives = 158/313 (50.48%), Query Frame = 0
BLAST of CmUC07G136660 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 120.9 bits (302), Expect = 1.8e-27 Identity = 97/320 (30.31%), Postives = 153/320 (47.81%), Query Frame = 0
BLAST of CmUC07G136660 vs. TAIR 10
Match: AT3G25990.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 5.6e-08 Identity = 34/124 (27.42%), Postives = 58/124 (46.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|